Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 1.6e-199 699.1 337 100.0
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 1.2e-173 613.2 336 87.8
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 1.4e-171 606.3 337 87.2
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 7.1e-171 604.0 337 85.8
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 5.1e-169 597.8 338 86.4
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 3.3e-168 595.1 338 86.1
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 1.3e-167 593.2 338 85.8
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 1.6e-167 592.8 337 86.6
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 1.8e-166 589.3 337 86.4
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 1.7e-164 582.8 341 83.3
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 9.3e-163 577.0 337 84.0
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 3.8e-156 555.1 335 77.9
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 5.0e-156 554.7 337 80.1
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 6.5e-156 554.3 337 77.4
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 1.9e-155 552.7 337 79.2
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 1.9e-155 552.7 334 79.9
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 7.2e-155 550.8 337 79.2
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 2.1e-154 549.3 335 79.4
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 1.8e-153 546.2 337 76.3
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 3.0e-153 545.4 335 76.4
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 8.8e-153 543.9 337 77.4
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 2.0e-152 542.7 337 76.6
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 1.7e-151 539.7 337 77.2
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 2.8e-151 538.9 331 75.8
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 4.8e-151 538.1 335 77.3
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 8.2e-151 537.3 337 76.9
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 1.1e-150 537.0 337 78.3
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 1.4e-150 536.6 337 77.2
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.8e-150 536.2 337 76.9
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 2.4e-150 535.8 337 75.1
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 3.1e-150 535.4 338 74.6
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 5.3e-150 534.6 337 76.3
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 1.2e-149 533.5 336 75.3
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 3.4e-149 531.9 337 74.8
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.0e-148 530.4 337 75.7
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 1.3e-148 530.0 335 74.6
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 1.3e-148 530.0 335 74.6
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 1.3e-148 530.0 335 73.7
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 1.7e-148 529.6 337 72.7
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 5.0e-148 528.1 337 73.9
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 6.5e-148 527.7 337 74.2
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.1e-147 526.9 337 73.6
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 4.2e-147 525.0 336 73.8
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 3.6e-146 521.9 337 71.8
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 1.0e-145 520.4 337 74.8
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 3.0e-145 518.8 337 73.3
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 3.9e-145 518.5 337 73.6
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 5.1e-145 518.1 337 70.9
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 8.8e-145 517.3 337 71.8
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 8.8e-145 517.3 337 71.8
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 1.1e-144 516.9 339 72.3
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 2.6e-144 515.8 334 76.0
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 5.7e-144 514.6 332 72.9
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 7.4e-144 514.2 339 74.3
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 1.3e-143 513.5 337 73.3
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 1.3e-143 513.5 337 73.3
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 2.2e-143 512.7 329 73.3
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 3.7e-143 511.9 337 71.8
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 4.8e-143 511.5 337 73.3
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 6.3e-143 511.1 337 72.1
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 1.1e-142 510.4 337 71.5
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 1.4e-142 510.0 333 72.7
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 1.8e-142 509.6 337 70.3
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 2.4e-142 509.2 346 71.1
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 4.1e-142 508.4 333 71.8
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 9.1e-142 507.3 335 73.1
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 1.2e-141 506.9 337 71.2
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 1.2e-141 506.9 334 71.9
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 4.5e-141 505.0 337 69.7
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 5.0e-140 501.5 335 72.2
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 8.5e-140 500.7 337 69.4
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 1.1e-139 500.4 337 69.7
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 1.9e-139 499.6 333 71.2
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.2e-138 496.9 339 72.3
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 4.7e-138 495.0 337 71.5
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 8.0e-138 494.2 335 71.3
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 5.2e-137 491.5 331 71.3
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 6.7e-137 491.1 330 70.6
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 8.8e-137 490.7 330 71.5
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 5.7e-136 488.0 339 68.1
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 1.7e-135 486.5 334 69.2
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 2.2e-135 486.1 335 69.0
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 4.8e-135 485.0 332 68.7
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 4.8e-135 485.0 338 68.0
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 1.8e-134 483.0 337 68.0
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.4e-134 482.6 337 68.2
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 3.5e-133 478.8 345 66.7
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 5.9e-133 478.0 328 69.2
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.0e-132 477.2 337 67.1
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 2.9e-132 475.7 330 67.3
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 3.8e-132 475.3 312 69.6
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 2.5e-131 472.6 338 66.6
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 1.6e-130 469.9 337 70.0
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 5.2e-129 464.9 333 67.0
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 2.8e-127 459.1 333 67.3
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 3.7e-127 458.8 337 64.7
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 4.8e-127 458.4 335 68.4
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 1.4e-126 456.8 329 65.3
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 4.1e-126 455.3 335 67.2
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 7.0e-126 454.5 337 65.0
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 3.5e-125 452.2 329 64.4
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 4.5e-125 451.8 329 64.1
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 1.0e-124 450.7 337 64.1
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 2.9e-124 449.1 337 64.1
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 3.8e-124 448.7 342 64.3
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 3.0e-121 439.1 330 63.6
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 6.8e-121 438.0 315 67.3
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 6.8e-121 438.0 334 61.7
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 2.2e-119 433.0 330 63.0
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 1.1e-118 430.6 330 63.3
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 2.9e-116 422.5 333 61.0
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 2.5e-115 419.5 321 65.1
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 4.2e-115 418.7 288 69.1
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 6.1e-114 414.8 288 68.4
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 4.0e-113 412.1 334 62.0
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 3.2e-110 402.5 377 54.4
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 1.7e-108 396.7 315 67.6
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 9.5e-107 391.0 331 59.5
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.8e-105 386.7 263 68.4
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 2.8e-98 362.8 260 66.9
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 2.1e-93 346.7 217 78.3
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 8.1e-90 334.7 209 77.0
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 1.8e-89 333.6 277 58.5
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 9.9e-88 327.8 340 50.9
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 2.9e-87 326.2 338 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 5.4e-86 322.0 385 46.5
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 1.2e-82 310.8 349 47.9
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 8.9e-81 304.7 334 49.1
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 4.8e-74 282.3 155 85.8
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 1.1e-73 281.2 275 53.5
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 2.4e-73 280.0 255 56.1
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 2.6e-72 276.6 406 39.9
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 4.4e-72 275.8 192 65.6
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 3.9e-60 236.1 187 61.0
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 1.3e-58 231.1 185 56.2
VMungo1309G1961 Vigna mungo HOM05D004754 ORTHO05D005566 1.0e-55 221.5 337 43.6
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 6.7e-52 208.8 376 35.6
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 6.9e-49 198.7 143 62.2
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 1.0e-44 184.9 249 42.6
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 3.0e-44 183.3 155 59.4
ECA234G3378 Erigeron canadensis HOM05D004754 ORTHO05D000282 2.2e-42 177.2 134 62.7
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 5.0e-39 166.0 91 85.7
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 8.5e-39 165.2 138 58.7
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 8.5e-39 165.2 138 58.7
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 1.4e-38 164.5 109 77.1
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 1.9e-38 164.1 152 58.6
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 9.1e-33 145.2 89 82.0
Lj6C128T1 Lonicera japonica HOM05D004754 ORTHO05D005566 9.7e-19 98.6 69 65.2
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 1.1e-17 95.1 287 26.5
Lju897C0T7 Lonicera japonica HOM05D004754 ORTHO05D005566 2.0e-16 90.9 69 62.3
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 1.7e-15 87.8 76 50.0
Potri.017G049500 Populus trichocarpa HOM05D004754 ORTHO05D005566 3.4e-11 73.6 39 82.1
Lju897C2T5 Lonicera japonica HOM05D004754 ORTHO05D005566 2.4e-09 67.4 61 54.1
Potri.006G050600 Populus trichocarpa HOM05D004754 ORTHO05D005566 4.1e-09 66.6 51 70.6
HPP92_027352 Vanilla planifolia HOM05D004754 ORTHO05D005566 5.9e-08 62.8 91 44.0
DCAR_004803 Daucus carota HOM05D019807 ORTHO05D005566 6.5e-07 59.3 34 76.5


User provided reference genes

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