Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 4.7e-255 884.0 448 100.0
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 5.8e-253 877.1 455 98.5
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 4.1e-206 721.5 456 80.0
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 6.7e-201 704.1 457 79.6
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 3.0e-193 678.7 454 73.8
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 8.8e-193 677.2 455 74.5
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 5.7e-192 674.5 455 75.6
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 1.1e-190 670.2 456 71.9
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 3.1e-190 668.7 457 72.9
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 3.6e-138 495.7 449 56.1
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 6.9e-137 491.5 454 53.7
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 1.5e-136 490.3 453 53.9
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 1.1e-134 484.2 455 54.1
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 3.0e-132 476.1 455 55.2
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.1e-131 474.2 450 53.3
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 2.5e-131 473.0 368 66.6
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 2.1e-130 469.9 471 56.5
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 6.2e-130 468.4 454 51.5
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 1.8e-129 466.8 454 51.3
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 9.0e-129 464.5 453 52.3
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 1.2e-128 464.2 462 50.9
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.5e-128 463.8 455 51.6
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 5.8e-128 461.8 458 53.3
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 5.8e-128 461.8 456 51.3
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 5.4e-126 455.3 454 52.6
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 3.9e-124 449.1 455 53.4
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 1.1e-123 447.6 455 50.1
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.5e-123 447.2 456 52.4
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 3.3e-123 446.0 459 55.3
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 4.3e-123 445.7 452 54.4
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 5.6e-123 445.3 443 52.6
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 8.1e-122 441.4 451 50.6
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.4e-121 440.7 456 51.8
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 9.0e-121 438.0 454 50.2
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 5.8e-120 435.3 447 51.9
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 1.3e-119 434.1 451 49.9
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.7e-119 433.7 454 48.5
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 6.4e-119 431.8 454 50.0
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.1e-118 431.0 454 50.0
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 2.5e-118 429.9 451 49.7
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.2e-118 429.5 451 49.0
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 4.2e-118 429.1 453 50.1
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 1.6e-117 427.2 498 45.6
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 3.5e-117 426.0 454 50.0
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 1.0e-116 424.5 487 47.2
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 9.6e-115 417.9 451 47.0
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.1e-113 414.5 455 48.6
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 5.3e-113 412.1 440 48.9
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 1.5e-112 410.6 455 46.6
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.5e-112 410.6 393 52.4
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 2.0e-112 410.2 462 47.0
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 5.8e-112 408.7 457 49.5
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 2.9e-111 406.4 443 46.7
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 2.9e-111 406.4 450 47.6
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 3.8e-111 406.0 443 46.5
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 6.5e-111 405.2 443 46.7
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 6.5e-111 405.2 451 46.8
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 4.2e-110 402.5 449 46.3
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 4.2e-110 402.5 456 46.3
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 9.3e-110 401.4 456 46.5
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 3.5e-109 399.4 450 46.0
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 6.0e-109 398.7 467 48.4
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 7.9e-109 398.3 446 45.7
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 1.0e-108 397.9 370 52.2
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 1.1e-107 394.4 460 46.5
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.9e-107 393.7 455 45.9
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 2.5e-107 393.3 453 47.7
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 3.3e-107 392.9 455 46.2
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 4.3e-107 392.5 455 46.6
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 9.7e-107 391.3 467 47.3
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 4.8e-106 389.0 449 47.0
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 1.4e-105 387.5 460 45.0
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.8e-105 387.1 435 47.6
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 5.3e-105 385.6 482 44.2
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 9.0e-105 384.8 451 45.9
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.2e-104 384.4 460 44.3
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 2.0e-104 383.6 452 46.0
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 1.3e-103 380.9 456 44.7
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 8.5e-103 378.3 454 45.2
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 3.2e-102 376.3 456 44.1
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.2e-102 375.9 447 44.7
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 9.4e-102 374.8 453 45.7
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 1.0e-100 371.3 439 43.5
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 1.5e-99 367.5 452 44.7
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 3.3e-99 366.3 401 48.1
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 9.7e-99 364.8 469 43.1
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 1.9e-94 350.5 433 41.1
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 1.0e-92 344.7 457 42.5
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 1.8e-92 344.0 466 41.0
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 2.6e-91 340.1 551 37.7
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 5.9e-88 328.9 473 40.0
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 1.0e-87 328.2 442 41.2
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 1.8e-84 317.4 456 39.5
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 2.3e-84 317.0 464 39.9
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 4.5e-80 302.8 363 45.2
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 1.3e-79 301.2 341 47.2
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 2.2e-79 300.4 464 39.7
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 1.8e-76 290.8 334 47.9
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 4.0e-68 263.1 457 34.1
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.7e-66 257.7 354 38.7
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 2.0e-64 250.8 458 35.2
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 2.7e-64 250.4 278 51.1
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 1.2e-61 241.5 358 38.5
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 8.0e-61 238.8 478 32.2
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 7.8e-56 222.2 214 50.9
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 3.3e-54 216.9 280 43.6
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.0e-52 211.8 376 34.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 9.2e-49 198.7 229 54.6
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 5.8e-43 179.5 192 44.8
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 1.3e-34 151.8 89 82.0
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 3.2e-33 147.1 172 54.7
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 2.1e-32 144.4 110 65.5
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 1.0e-31 142.1 449 27.8
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 3.8e-26 123.6 440 24.8
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 9.3e-25 119.0 137 43.1
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.3e-22 110.5 179 32.4
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.8e-18 97.1 130 40.8
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 1.7e-15 88.2 320 24.7
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 3.0e-15 87.4 416 24.8
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 3.6e-13 80.5 138 37.0
Glyma.09G075800 Glycine max HOM05D006101 ORTHO05D007422 6.2e-13 79.7 50 78.0
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-09 68.2 96 41.7


User provided reference genes

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