Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02420_v3 Cicer arietinum L. HOM05D007390 ORTHO05D009114 1.2e-84 318.5 699 100.0
Ca_02001_v3 Cicer arietinum L. HOM05D007390 ORTHO05D009114 3.3e-61 240.7 154 78.6
Psat6g031600 Pisum sativum HOM05D007390 ORTHO05D009114 1.5e-50 205.3 148 70.3
TPR.G1694 Trifolium pratense HOM05D007390 ORTHO05D009114 5.8e-50 203.4 152 69.1
Psat1g149640 Pisum sativum HOM05D007390 ORTHO05D009114 3.2e-48 197.6 148 67.6
Glyma.15G202500 Glycine max HOM05D007390 ORTHO05D009114 5.4e-48 196.8 150 66.7
Medtr2g036080 Medicago truncatula HOM05D007390 ORTHO05D009114 2.7e-47 194.5 152 63.8
Phvul.009G209400 Phaseolus vulgaris HOM05D007390 ORTHO05D009114 2.7e-47 194.5 150 67.3
Lj6g0008328 Lotus japonicus HOM05D007390 ORTHO05D009114 1.3e-46 192.2 152 63.8
Lalb_Chr15g0083781 Lupinus albus HOM05D007390 ORTHO05D009114 1.3e-46 192.2 152 65.8
arahy.Tifrunner.gnm1.ann1.885AEG Arachis hypogaea HOM05D007390 ORTHO05D009114 2.6e-42 177.9 154 60.4
QL08p003914 Quercus lobata HOM05D007390 ORTHO05D009114 1.8e-38 165.2 153 54.2
Prupe.6G024500 Prunus persica HOM05D007390 ORTHO05D009114 1.4e-35 155.6 154 53.9
FAN11G2668 Fragaria x ananassa HOM05D007390 ORTHO05D009114 2.4e-35 154.8 154 51.9
FvH4_3g42930 Fragaria vesca HOM05D007390 ORTHO05D009114 3.1e-35 154.5 154 51.3
Duzib213G0999 Durio zibethinus HOM05D007390 ORTHO05D009114 1.2e-34 152.5 154 50.0
FAN21G2513 Fragaria x ananassa HOM05D007390 ORTHO05D009114 1.2e-34 152.5 154 51.3
Lj8P179T40 Lonicera japonica HOM05D007390 ORTHO05D009114 1.2e-34 152.5 154 50.6
CSS0024662 Camellia sinensis var. sinensis HOM05D007390 ORTHO05D009114 2.6e-34 151.4 154 48.7
CSS0045615 Camellia sinensis var. sinensis HOM05D007390 ORTHO05D009114 2.6e-34 151.4 154 48.7
Lj1g0022770 Lotus japonicus HOM05D007390 ORTHO05D009114 2.6e-34 151.4 127 60.6
Rhsim04G0012100 Rhododendron simsii HOM05D007390 ORTHO05D009114 2.2e-33 148.3 154 48.1
MD03G1028500 Malus domestica HOM05D007390 ORTHO05D009114 2.9e-33 147.9 154 50.6
Haze_09837 Corylus avellana HOM05D007390 ORTHO05D009114 3.8e-33 147.5 143 51.7
RcHm_v2.0_Chr5g0076971 Rosa chinensis HOM05D007390 ORTHO05D009114 3.8e-33 147.5 154 49.4
Actinidia35406 Actinidia chinensis HOM05D007390 ORTHO05D009114 2.5e-32 144.8 154 48.7
CsaV3_3G042310 Cucumis sativus L. HOM05D007390 ORTHO05D009114 2.5e-32 144.8 154 48.7
Manes.15G058900 Manihot esculenta HOM05D007390 ORTHO05D009114 4.2e-32 144.1 153 47.1
Dinv40864 Davidia involucrata HOM05D007390 ORTHO05D009114 9.3e-32 142.9 126 55.6
Nn5g29749 Nelumbo nucifera HOM05D007390 ORTHO05D009114 1.2e-31 142.5 152 49.3
Potri.001G368700 Populus trichocarpa HOM05D007390 ORTHO05D009114 2.1e-31 141.7 144 50.7
Thecc.07G011700 Theobroma cacao HOM05D007390 ORTHO05D009114 3.5e-31 141.0 153 48.4
TWI39G0225 Tripterygium wilfordii HOM05D007390 ORTHO05D009114 6.1e-31 140.2 148 50.7
CiPaw.11G204600 Carya illinoinensis HOM05D007390 ORTHO05D009114 1.0e-30 139.4 136 52.9
Atru.chr2.3702 Acer truncatum HOM05D007390 ORTHO05D009114 1.8e-30 138.7 154 48.1
GSVIVG01012774001 Vitis vinifera HOM05D007390 ORTHO05D009114 1.8e-30 138.7 152 47.4
vmacro09644 Vaccinium macrocarpon HOM05D007390 ORTHO05D009114 5.1e-30 137.1 154 44.2
ClCG09G021340 Citrullus lanatus HOM05D007390 ORTHO05D009114 6.7e-30 136.7 155 48.4
SGA_v2.0_scaffold13G06360 Striga asiatica HOM05D007390 ORTHO05D009114 1.5e-29 135.6 153 44.4
Lj1g0019016 Lotus japonicus HOM05D007390 ORTHO05D009114 5.7e-29 133.7 148 62.8
MSTRG.27466 Avicennia marina HOM05D007390 ORTHO05D009114 9.7e-29 132.9 154 45.5
FAN11G1706 Fragaria x ananassa HOM05D007390 ORTHO05D009114 9.7e-29 132.9 137 50.4
Nitab4.5_0000756g0010 Nicotiana tabacum HOM05D007390 ORTHO05D009114 9.7e-29 132.9 153 43.1
Nitab4.5_0000163g0140 Nicotiana tabacum HOM05D007390 ORTHO05D009114 2.8e-28 131.3 152 43.4
Cpa.g.c43812 Carica papaya HOM05D007390 ORTHO05D009114 6.3e-28 130.2 131 51.1
Cc05_g15030 Coffea canephora HOM05D007390 ORTHO05D009114 6.3e-28 130.2 154 42.9
AUR62017120 Chenopodium quinoa HOM05D007390 ORTHO05D009114 1.8e-27 128.6 154 43.5
PGR031G0714 Punica granatum HOM05D007390 ORTHO05D009114 2.4e-27 128.3 154 42.9
Sed0024715 Sechium edule HOM05D007390 ORTHO05D009114 2.4e-27 128.3 154 46.1
Hund07420 Selenicereus undatus HOM05D007390 ORTHO05D009114 2.4e-27 128.3 148 43.9
TAR626G0036 Trochodendron aralioides HOM05D007390 ORTHO05D009114 3.1e-27 127.9 133 52.6
Sc16g0008150 Simmondsia chinensis HOM05D007390 ORTHO05D009114 4.1e-27 127.5 154 44.2
AUR62036473 Chenopodium quinoa HOM05D007390 ORTHO05D009114 5.3e-27 127.1 154 41.6
Ciclev10007298m.g Citrus clementina HOM05D007390 ORTHO05D009114 5.3e-27 127.1 134 49.3
Lsat_1_v5_gn_6_101541 Lactuca sativa HOM05D007390 ORTHO05D009114 2.0e-26 125.2 155 45.8
PGSC0003DMG400029810 Solanum tuberosum HOM05D007390 ORTHO05D009114 5.9e-26 123.6 147 42.9
Gohir.A01G092200 Gossypium hirsutum HOM05D007390 ORTHO05D009114 1.7e-25 122.1 132 50.8
Sopen12g007640 Solanum pennellii HOM05D007390 ORTHO05D009114 1.7e-25 122.1 145 43.4
EL10Ac4g07549 Beta vulgaris HOM05D007390 ORTHO05D009114 2.2e-25 121.7 154 42.9
CAN.G354.45 Capsicum annuum HOM05D007390 ORTHO05D009114 2.2e-25 121.7 158 43.0
CARHR269210 Cardamine hirsuta HOM05D007390 ORTHO05D009114 5.0e-25 120.6 154 42.2
Gorai.002G101000 Gossypium raimondii HOM05D007390 ORTHO05D009114 5.0e-25 120.6 132 50.0
ECA246G4229 Erigeron canadensis HOM05D000587 ORTHO05D009114 6.5e-25 120.2 155 45.8
BcaB08g35953 Brassica carinata HOM05D007390 ORTHO05D009114 1.1e-24 119.4 159 44.0
AL8G31410 Arabidopsis lyrata HOM05D007390 ORTHO05D009114 1.4e-24 119.0 154 42.9
A10p13050 Brassica napus HOM05D007390 ORTHO05D009114 1.4e-24 119.0 154 44.2
BraA10t43400Z Brassica rapa HOM05D007390 ORTHO05D009114 1.4e-24 119.0 154 44.2
Sp6g17720 Schrenkiella parvula HOM05D007390 ORTHO05D009114 3.2e-24 117.9 154 42.9
AT5G55840 Arabidopsis thaliana HOM05D007390 ORTHO05D009114 7.2e-24 116.7 154 42.2
Carub.0008s1619 Capsella rubella HOM05D007390 ORTHO05D009114 7.2e-24 116.7 154 42.9
Ah.03g135270 Amaranthus hybridus HOM05D007390 ORTHO05D009114 9.4e-24 116.3 154 40.3
BcaB08g35944 Brassica carinata HOM05D007390 ORTHO05D009114 1.6e-23 115.5 154 42.9
BcaB08g35947 Brassica carinata HOM05D007390 ORTHO05D009114 1.6e-23 115.5 154 42.9
BcaC04g20197 Brassica carinata HOM05D007390 ORTHO05D009114 1.6e-23 115.5 154 42.9
C09p46770 Brassica napus HOM05D007390 ORTHO05D009114 1.6e-23 115.5 154 42.9
BolC9t57528H Brassica oleracea HOM05D007390 ORTHO05D009114 2.1e-23 115.2 154 42.9
HanXRQChr05g0162401 Helianthus annuus HOM05D007390 ORTHO05D009114 2.1e-23 115.2 155 43.9
THA.LOC104811670 Tarenaya hassleriana HOM05D007390 ORTHO05D009114 2.1e-23 115.2 154 39.6
Aa31LG3G11740 Aethionema arabicum HOM05D007390 ORTHO05D009114 2.7e-23 114.8 154 40.9
Aqoxy4G00642 Aquilegia oxysepala HOM05D007390 ORTHO05D009114 1.4e-22 112.5 144 42.4
ATR0751G228 Amborella trichopoda HOM05D007390 ORTHO05D009114 3.0e-22 111.3 155 40.0
Migut.F01991 Erythranthe guttata HOM05D007390 ORTHO05D009114 5.1e-22 110.5 150 40.0
SalBow4G3102 Salvia bowleyana HOM05D007390 ORTHO05D009114 9.7e-21 106.3 146 41.8
MBI18_g16977_MAGBIO Magnolia biondii HOM05D007390 ORTHO05D009114 6.9e-19 100.1 137 42.3
CAN.G354.69 Capsicum annuum HOM05D007390 ORTHO05D009114 7.2e-16 90.1 147 36.1
ATR0691G117 Amborella trichopoda HOM05D007390 ORTHO05D009114 3.0e-14 84.7 133 39.8
Oeu049407.2 Olea europaea HOM05D007390 ORTHO05D009114 3.9e-14 84.3 95 41.1
VMungo1309G2419 Vigna mungo HOM05D002770 ORTHO05D009114 1.1e-13 82.8 75 57.3
Lsat_1_v5_gn_5_144140 Lactuca sativa HOM05D007390 ORTHO05D009114 2.2e-12 78.6 73 54.8
Lsat_1_v5_gn_3_61021 Lactuca sativa HOM05D007390 ORTHO05D009114 4.8e-12 77.4 73 54.8
MELO3C009949.2 Cucumis melo HOM05D007390 ORTHO05D009114 6.5e-09 67.0 50 58.0
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.6e-07 62.4 142 33.1
Eucgr.G02563 Eucalyptus grandis HOM05D007390 ORTHO05D009114 5.2e-06 57.4 51 52.9


User provided reference genes

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