Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 4.1e-100 368.2 209 100.0
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 2.3e-66 256.1 214 73.8
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 7.8e-59 231.1 208 70.7
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 2.5e-57 226.1 162 79.0
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 8.1e-56 221.1 216 63.9
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 1.7e-53 213.4 149 79.9
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 1.7e-53 213.4 150 80.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 5.1e-50 201.8 215 63.3
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 5.1e-50 201.8 161 72.7
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.5e-49 200.3 141 75.2
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.6e-48 196.8 139 77.0
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.1e-48 196.4 209 59.8
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 3.6e-48 195.7 161 70.2
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 4.7e-48 195.3 163 69.3
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 6.2e-48 194.9 214 59.3
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 8.1e-48 194.5 134 76.9
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.4e-47 193.7 159 69.8
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.8e-47 193.4 136 77.2
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 8.9e-47 191.0 145 71.0
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.0e-46 189.9 155 67.7
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 2.6e-46 189.5 172 66.3
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 5.8e-46 188.3 190 61.1
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 7.6e-46 188.0 164 67.7
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 7.6e-46 188.0 150 70.0
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-45 187.2 154 66.9
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.7e-45 186.8 168 66.7
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.7e-45 186.8 138 72.5
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 1.7e-45 186.8 158 66.5
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.7e-45 186.8 226 58.0
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.8e-45 185.7 135 73.3
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 3.8e-45 185.7 171 63.7
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 4.9e-45 185.3 138 72.5
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 4.9e-45 185.3 138 72.5
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 4.9e-45 185.3 151 66.2
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 6.4e-45 184.9 228 56.6
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 6.4e-45 184.9 139 71.9
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.1e-44 184.1 151 65.6
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.1e-44 184.1 135 71.9
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 1.1e-44 184.1 173 63.0
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.9e-44 183.3 153 66.0
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 3.2e-44 182.6 151 66.9
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 3.2e-44 182.6 139 71.2
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 5.4e-44 181.8 214 54.7
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 5.4e-44 181.8 208 56.2
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 7.1e-44 181.4 141 70.9
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 9.2e-44 181.0 209 56.9
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.2e-43 180.6 197 58.4
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 2.1e-43 179.9 132 72.7
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.0e-43 178.3 140 67.1
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 7.8e-43 177.9 139 66.9
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 7.8e-43 177.9 221 54.3
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.0e-42 177.6 146 68.5
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.3e-42 177.2 175 61.1
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 3.9e-42 175.6 191 56.5
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 5.1e-42 175.3 134 68.7
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 8.7e-42 174.5 173 61.3
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 2.5e-41 172.9 199 56.3
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.3e-41 172.2 153 64.7
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 5.6e-41 171.8 192 54.7
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 2.1e-40 169.9 162 58.6
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 3.6e-40 169.1 157 62.4
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 4.8e-40 168.7 190 56.8
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 6.2e-40 168.3 167 59.3
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 2.4e-39 166.4 154 60.4
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 4.0e-39 165.6 139 63.3
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.3e-39 165.2 136 64.7
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.2e-38 164.1 191 52.9
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.2e-38 164.1 132 67.4
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 1.5e-38 163.7 190 55.8
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 1.5e-38 163.7 190 55.8
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 1.5e-38 163.7 190 55.8
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 2.0e-38 163.3 150 62.0
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 3.4e-38 162.5 200 52.0
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.4e-38 162.5 196 54.6
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.4e-38 162.5 136 64.0
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 4.4e-38 162.2 185 55.1
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 4.4e-38 162.2 164 58.5
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 5.8e-38 161.8 150 62.0
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 7.6e-38 161.4 211 52.6
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 1.7e-37 160.2 131 66.4
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.2e-37 159.8 144 62.5
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 6.4e-37 158.3 202 52.5
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 6.4e-37 158.3 132 62.9
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 8.4e-37 157.9 138 63.8
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.1e-36 157.5 177 55.4
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 1.4e-36 157.1 205 52.2
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-36 157.1 159 58.5
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.4e-36 157.1 175 53.7
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.9e-36 156.8 178 53.9
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 1.9e-36 156.8 132 63.6
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 3.2e-36 156.0 169 55.0
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 5.4e-36 155.2 173 56.1
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 7.1e-36 154.8 134 61.9
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 7.1e-36 154.8 186 52.2
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 2.7e-35 152.9 132 61.4
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 3.5e-35 152.5 190 50.0
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 4.6e-35 152.1 132 62.9
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 4.6e-35 152.1 153 57.5
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 7.8e-35 151.4 172 51.7
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 3.9e-34 149.1 153 56.2
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 5.1e-34 148.7 154 63.6
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 6.6e-34 148.3 147 56.5
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-33 147.5 192 50.0
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 2.5e-33 146.4 192 49.5
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 3.3e-33 146.0 189 47.6
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 3.6e-32 142.5 127 58.3
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 4.8e-32 142.1 213 46.5
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 4.8e-32 142.1 213 46.5
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 4.8e-32 142.1 213 46.5
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 8.1e-32 141.4 192 50.5
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.1e-32 141.4 111 64.9
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.8e-31 140.2 193 50.3
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.7e-29 133.7 186 47.3
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-29 133.3 201 49.8
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 4.9e-29 132.1 214 47.2
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 4.9e-29 132.1 132 54.5
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 6.4e-29 131.7 160 51.9
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 6.4e-29 131.7 160 51.9
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-28 131.0 200 48.5
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.1e-28 131.0 200 48.5
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 1.9e-28 130.2 214 46.7
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 2.4e-28 129.8 209 45.9
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 7.1e-28 128.3 170 52.4
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.2e-27 127.5 98 66.3
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 1.3e-26 124.0 165 49.1
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 1.9e-25 120.2 115 57.4
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 3.3e-25 119.4 164 48.8
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 7.4e-25 118.2 204 44.6
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.6e-24 117.1 175 47.4
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 2.0e-22 110.2 181 44.8
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 4.5e-22 109.0 202 45.0
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 2.9e-21 106.3 136 47.8
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 3.8e-21 105.9 202 44.6
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.2e-19 100.9 162 44.4
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 4.6e-19 99.0 138 48.6
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 6.0e-19 98.6 171 42.7
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.2e-14 84.3 69 66.7


User provided reference genes

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