Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 0.0e+00 1212.6 599 100.0
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 1.9e-222 776.2 518 76.4
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 2.7e-221 772.3 509 77.2
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 8.4e-215 750.7 516 73.4
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.5e-184 650.2 518 65.8
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 3.9e-180 635.6 523 66.3
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 7.4e-179 631.3 525 62.7
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 2.8e-178 629.4 518 63.1
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 6.1e-173 611.7 517 62.7
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 6.7e-172 608.2 519 61.3
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 2.0e-168 596.7 523 60.0
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 1.7e-159 567.0 488 61.5
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 7.2e-150 535.0 488 59.2
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 7.3e-134 481.9 519 51.3
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.0e-124 449.5 563 46.0
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 8.9e-124 448.4 530 48.5
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 1.5e-123 447.6 518 49.4
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 9.8e-123 444.9 514 49.2
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.9e-121 440.7 570 45.4
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 1.9e-121 440.7 524 48.1
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 7.1e-121 438.7 518 47.9
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 7.8e-120 435.3 517 49.1
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 3.3e-118 429.9 516 47.3
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 9.5e-118 428.3 513 47.4
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.7e-117 426.0 608 42.9
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 6.8e-116 422.2 520 46.9
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 8.9e-116 421.8 518 46.5
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 5.8e-115 419.1 464 51.5
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.2e-112 411.4 518 46.9
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.0e-111 408.3 517 46.2
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 9.9e-107 391.7 522 46.0
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 1.3e-106 391.3 529 44.4
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 6.4e-106 389.0 518 46.1
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.9e-105 387.5 543 42.9
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 7.1e-105 385.6 507 44.4
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 7.8e-104 382.1 514 45.7
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 8.7e-103 378.6 510 42.9
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 2.1e-101 374.0 495 45.1
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 2.4e-100 370.5 644 38.5
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 9.0e-100 368.6 525 42.5
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 5.8e-99 365.9 509 43.8
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 1.3e-98 364.8 520 44.4
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 6.4e-98 362.5 524 44.7
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 1.4e-97 361.3 534 42.7
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 7.1e-97 359.0 531 44.6
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 9.3e-97 358.6 531 44.4
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 3.5e-96 356.7 530 42.3
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 7.9e-96 355.5 526 39.5
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 6.2e-93 345.9 417 46.3
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 3.8e-90 336.7 508 41.1
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 9.3e-89 332.0 527 40.0
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 2.1e-88 330.9 508 40.9
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 2.7e-88 330.5 500 42.0
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 4.6e-88 329.7 881 30.6
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 1.1e-86 325.1 511 41.5
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 3.3e-86 323.6 511 41.1
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 7.4e-86 322.4 508 41.3
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 7.4e-86 322.4 509 39.9
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 2.8e-85 320.5 510 40.8
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 4.8e-85 319.7 519 41.4
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 6.2e-85 319.3 504 39.9
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 8.1e-85 318.9 517 41.4
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.1e-84 318.5 511 40.9
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 1.4e-84 318.2 518 41.1
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 9.0e-84 315.5 508 41.3
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 2.6e-83 313.9 513 41.5
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 2.9e-82 310.5 527 39.5
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 2.9e-82 310.5 512 41.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.9e-81 307.8 529 38.4
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 2.5e-81 307.4 301 53.2
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 4.2e-81 306.6 511 38.7
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 9.3e-81 305.4 450 41.3
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 2.1e-80 304.3 699 33.9
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 2.5e-78 297.4 444 42.6
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 6.9e-76 289.3 430 42.8
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 7.6e-75 285.8 396 44.2
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 2.9e-74 283.9 512 37.9
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 5.0e-74 283.1 515 37.1
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 9.3e-73 278.9 443 37.9
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 1.3e-71 275.0 507 38.1
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 1.8e-71 274.6 515 35.9
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 4.3e-70 270.0 546 33.0
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 2.8e-69 267.3 525 36.4
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 5.9e-67 259.6 228 60.1
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.5e-65 254.2 508 35.2
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 1.4e-63 248.4 522 33.0
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 8.8e-55 219.2 344 43.6
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 3.5e-51 207.2 452 34.7
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 5.5e-49 199.9 362 38.7
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 7.5e-46 189.5 538 31.2
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 5.5e-41 173.3 272 43.0
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 4.7e-40 170.2 248 42.3
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 3.0e-39 167.5 376 33.8
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 4.4e-38 163.7 308 36.7
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 2.2e-37 161.4 152 55.3
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 2.8e-37 161.0 261 39.5
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 6.3e-37 159.8 462 29.0
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 3.1e-36 157.5 363 32.5
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 2.7e-32 144.4 535 26.4
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.0e-31 142.5 123 58.5
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 9.8e-30 136.0 149 46.3
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 4.1e-28 130.6 88 68.2
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 1.6e-27 128.6 291 34.0
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 2.8e-24 117.9 181 35.9
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.4e-23 115.5 69 75.4
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 2.4e-20 104.8 137 46.0
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 4.1e-20 104.0 134 41.8
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 9.2e-20 102.8 510 24.3
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 7.8e-19 99.8 595 22.2
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 1.3e-18 99.0 69 59.4
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 2.2e-13 81.6 133 36.8
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 2.4e-12 78.2 140 35.0
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 7.0e-12 76.6 119 38.7
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 9.2e-12 76.3 92 47.8
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 1.0e-10 72.8 138 37.0
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 1.0e-10 72.8 138 37.0
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 3.3e-09 67.8 208 27.9
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 7.3e-09 66.6 115 34.8
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 7.3e-09 66.6 115 34.8
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 7.3e-09 66.6 115 34.8
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 1.2e-06 59.3 132 30.3
Cpa.g.c41422 Carica papaya HOM05D005725 ORTHO05D007531 9.8e-06 56.2 43 58.1


User provided reference genes

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