Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 4.3e-72 274.6 145 100.0
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 2.7e-58 228.8 149 81.2
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 6.0e-58 227.6 146 81.5
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 2.6e-53 212.2 152 73.7
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 6.4e-52 207.6 151 74.2
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 1.6e-50 203.0 153 73.2
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 7.8e-50 200.7 153 71.2
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 2.8e-47 192.2 145 69.7
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 8.1e-47 190.7 140 67.9
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 2.7e-42 175.6 120 70.8
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.7e-41 172.9 130 66.9
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 6.6e-41 171.0 131 68.7
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 4.3e-40 168.3 124 66.1
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 4.3e-40 168.3 130 65.4
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 5.6e-40 167.9 126 65.9
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 9.6e-40 167.2 127 65.4
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.6e-39 166.4 124 66.1
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.6e-39 166.4 124 66.1
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.1e-39 166.0 117 69.2
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 2.1e-39 166.0 127 66.1
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 2.1e-39 166.0 132 62.9
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 3.6e-39 165.2 120 66.7
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 4.8e-39 164.9 135 63.7
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 6.2e-39 164.5 115 69.6
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 6.2e-39 164.5 115 69.6
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.1e-38 163.7 141 60.3
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 1.1e-38 163.7 141 60.3
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.1e-38 163.7 120 70.8
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 3.1e-38 162.2 147 59.2
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 4.0e-38 161.8 112 67.9
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 4.0e-38 161.8 112 67.9
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 4.0e-38 161.8 115 69.6
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 5.3e-38 161.4 117 68.4
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.5e-37 159.8 118 66.1
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 1.5e-37 159.8 117 67.5
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 1.5e-37 159.8 147 58.5
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 2.0e-37 159.5 126 61.9
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 2.0e-37 159.5 118 63.6
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.0e-37 159.5 128 63.3
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 2.0e-37 159.5 128 63.3
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 2.6e-37 159.1 117 66.7
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 2.6e-37 159.1 131 63.4
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 3.4e-37 158.7 124 65.3
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 5.8e-37 157.9 127 64.6
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 5.8e-37 157.9 112 66.1
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 5.8e-37 157.9 127 61.4
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 7.6e-37 157.5 115 67.0
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 9.9e-37 157.1 115 64.3
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 9.9e-37 157.1 112 66.1
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 9.9e-37 157.1 112 66.1
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.3e-36 156.8 113 66.4
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 1.7e-36 156.4 114 66.7
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 1.7e-36 156.4 115 64.3
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 1.7e-36 156.4 112 66.1
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 1.7e-36 156.4 128 62.5
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.2e-36 156.0 113 69.9
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 2.9e-36 155.6 119 66.4
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 2.9e-36 155.6 119 66.4
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 2.9e-36 155.6 116 66.4
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 3.8e-36 155.2 141 57.4
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 4.9e-36 154.8 112 65.2
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 4.9e-36 154.8 143 55.9
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 6.4e-36 154.5 115 63.5
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 8.4e-36 154.1 129 62.0
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 1.4e-35 153.3 112 64.3
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 1.4e-35 153.3 137 56.9
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 1.9e-35 152.9 115 66.1
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 2.4e-35 152.5 151 53.6
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 2.4e-35 152.5 159 52.2
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.2e-35 151.8 119 63.0
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 5.4e-35 151.4 114 66.7
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 5.4e-35 151.4 116 62.9
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 1.2e-34 150.2 118 61.9
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 3.5e-34 148.7 143 55.2
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 3.5e-34 148.7 158 53.2
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 4.6e-34 148.3 115 65.2
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 6.0e-34 147.9 158 50.0
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 1.0e-33 147.1 129 58.9
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.3e-33 146.7 113 64.6
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 2.3e-33 146.0 140 58.6
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.0e-33 145.6 111 65.8
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.9e-32 142.9 144 54.9
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 1.3e-31 140.2 123 61.8
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.3e-31 140.2 96 68.8
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 8.1e-31 137.5 137 54.7
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 1.8e-30 136.3 168 45.2
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 4.0e-30 135.2 125 55.2
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.4e-27 126.7 128 53.1
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.4e-27 126.7 127 54.3
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 3.2e-27 125.6 128 53.1
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 5.5e-27 124.8 125 55.2
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 7.1e-27 124.4 133 53.4
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.6e-26 123.2 122 56.6
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 7.9e-26 120.9 89 68.5
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 1.3e-25 120.2 86 68.6
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 8.7e-25 117.5 141 48.2
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 4.3e-24 115.2 121 52.9
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 3.7e-23 112.1 136 47.1
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 1.8e-22 109.8 113 47.8
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 5.8e-21 104.8 80 63.8
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 7.6e-21 104.4 101 55.4
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.3e-20 103.6 114 43.9
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 1.3e-20 103.6 87 59.8
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 6.5e-20 101.3 112 50.9
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 6.5e-20 101.3 69 78.3
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 8.4e-20 100.9 73 68.5
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.1e-19 100.5 87 62.1
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.9e-19 99.8 87 55.2
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.2e-15 86.3 54 77.8
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 9.4e-11 70.9 48 75.0
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 2.7e-10 69.3 48 60.4
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.0e-09 65.9 48 64.6
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 8.8e-09 64.3 102 34.3
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.3e-08 62.4 99 43.4
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 8.2e-07 57.8 80 45.0
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 2.4e-06 56.2 64 50.0


User provided reference genes

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