Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 3.0e-162 575.1 288 100.0
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 2.1e-123 446.0 293 78.2
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 5.8e-121 438.0 291 77.3
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 5.1e-101 371.7 322 62.7
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 1.4e-95 353.6 307 64.5
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 1.4e-95 353.6 307 64.5
TPR.G24674 Trifolium pratense HOM05D006860 ORTHO05D009547 1.9e-95 353.2 242 74.0
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 1.8e-93 346.7 303 61.4
Lj6g0006421 Lotus japonicus HOM05D006860 ORTHO05D009547 5.3e-90 335.1 295 61.0
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 2.3e-85 319.7 269 62.1
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 1.6e-83 313.5 271 60.5
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 1.2e-70 270.8 274 52.6
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 2.7e-70 269.6 269 53.2
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 1.5e-68 263.8 276 51.4
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 1.4e-66 257.3 271 50.9
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 5.3e-66 255.4 285 51.2
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 6.5e-64 248.4 253 51.4
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 3.2e-63 246.1 254 51.2
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 5.5e-63 245.4 253 49.4
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 5.2e-61 238.8 246 49.2
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 5.2e-61 238.8 271 49.4
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 8.8e-61 238.0 267 48.3
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.5e-60 237.3 253 49.8
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 3.3e-60 236.1 271 48.7
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 5.7e-60 235.3 277 48.0
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 1.3e-59 234.2 274 48.9
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 8.2e-59 231.5 252 45.6
Atru.chr9.1377 Acer truncatum HOM05D006860 ORTHO05D009547 1.1e-58 231.1 277 46.2
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 3.1e-58 229.6 275 46.5
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 9.1e-58 228.0 288 47.2
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 2.6e-57 226.5 272 46.0
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 2.6e-57 226.5 273 46.2
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 5.9e-57 225.3 254 47.2
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 5.9e-57 225.3 269 44.6
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 7.7e-57 224.9 267 46.8
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 1.0e-56 224.6 279 48.7
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 1.0e-56 224.6 268 44.8
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 1.0e-56 224.6 269 44.6
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 1.7e-56 223.8 254 47.2
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 3.8e-56 222.6 254 46.5
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 5.0e-56 222.2 256 46.5
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 8.5e-56 221.5 278 43.9
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 1.2e-54 217.6 218 50.5
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 1.2e-54 217.6 254 44.9
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 2.1e-54 216.9 256 44.9
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.4e-53 214.2 254 48.0
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 3.0e-53 213.0 286 45.1
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 2.6e-52 209.9 254 43.3
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 5.7e-52 208.8 277 41.5
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 1.3e-51 207.6 269 45.4
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 6.3e-51 205.3 227 46.3
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 8.2e-51 204.9 273 43.6
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 1.1e-50 204.5 283 41.7
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 1.4e-50 204.1 281 43.4
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 1.8e-50 203.8 268 43.3
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 5.3e-50 202.2 267 43.1
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 1.6e-49 200.7 268 42.5
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 1.6e-49 200.7 270 43.7
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 2.0e-49 200.3 267 42.7
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 2.0e-49 200.3 228 47.8
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 2.7e-49 199.9 262 42.7
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 4.5e-49 199.1 268 42.2
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 1.3e-48 197.6 271 42.8
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 2.2e-48 196.8 270 43.0
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 3.8e-48 196.1 228 46.1
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 5.0e-48 195.7 219 47.0
EL10Ac5g13012 Beta vulgaris HOM05D006860 ORTHO05D009547 4.7e-46 189.1 272 40.8
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 6.1e-46 188.7 301 39.2
Cpa.g.sc29.129 Carica papaya HOM05D006860 ORTHO05D009547 8.0e-46 188.3 256 44.5
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 1.4e-45 187.6 214 46.7
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 8.8e-45 184.9 213 43.2
Ciclev10024312m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.3e-43 181.0 269 39.4
Actinidia27452 Actinidia chinensis HOM05D006860 ORTHO05D009547 2.8e-43 179.9 210 48.6
PGR031G3062 Punica granatum HOM05D006860 ORTHO05D009547 1.1e-42 177.9 251 43.0
Ah.12g056480 Amaranthus hybridus HOM05D006860 ORTHO05D009547 2.0e-41 173.7 255 40.8
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 1.0e-40 171.4 95 87.4
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 1.2e-38 164.5 268 37.7
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 1.6e-38 164.1 264 37.1
HPP92_025603 Vanilla planifolia HOM05D006860 ORTHO05D009547 1.8e-37 160.6 274 35.8
Sc07g0009390 Simmondsia chinensis HOM05D000685 ORTHO05D000511 1.3e-35 154.5 241 40.2
HPP92_025643 Vanilla planifolia HOM05D006860 ORTHO05D009547 2.5e-31 140.2 258 36.0
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 2.1e-30 137.1 82 81.7
TPR.G18947 Trifolium pratense HOM05D006860 ORTHO05D009547 1.4e-29 134.4 90 77.8
Zm00001eb249700 Zea mays HOM05D006860 ORTHO05D009547 2.9e-27 126.7 258 29.8
Os02g0661300 Oryza sativa ssp. japonica HOM05D006860 ORTHO05D009547 8.3e-27 125.2 260 30.0
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 1.0e-21 108.2 114 49.1
Sp7g20630 Schrenkiella parvula HOM05D006860 ORTHO05D015488 8.9e-21 105.1 250 30.4
Ciclev10023898m.g Citrus clementina HOM05D006860 ORTHO05D009547 6.4e-19 99.0 126 43.7
BcaB03g15468 Brassica carinata HOM05D000561 ORTHO05D009547 9.2e-18 95.1 260 31.5
Carub.0008s2329 Capsella rubella HOM05D006860 ORTHO05D009547 1.0e-16 91.7 246 27.2
BcaB03g15470 Brassica carinata HOM05D006860 ORTHO05D009547 2.3e-16 90.5 247 30.4
BcaNung01686 Brassica carinata HOM05D006860 ORTHO05D009547 1.9e-15 87.4 260 31.5
BraA03t14425Z Brassica rapa HOM05D006860 ORTHO05D015488 1.9e-15 87.4 262 30.5
BcaNung02490 Brassica carinata HOM05D006860 ORTHO05D015488 2.5e-15 87.0 258 29.8
A03p53590 Brassica napus HOM05D006860 ORTHO05D015488 2.1e-14 84.0 263 29.3
BcaNung01688 Brassica carinata HOM05D006860 ORTHO05D015488 1.1e-13 81.6 248 28.2
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 6.8e-13 79.0 126 33.3
BcaNung01685 Brassica carinata HOM05D006860 ORTHO05D009547 3.4e-12 76.6 262 28.2
A03p53560 Brassica napus HOM05D006860 ORTHO05D015488 1.7e-11 74.3 247 27.5
Ciclev10010734m.g Citrus clementina HOM05D006860 ORTHO05D009547 3.7e-11 73.2 112 38.4
BraA03t14422Z Brassica rapa HOM05D006860 ORTHO05D015488 4.9e-11 72.8 247 27.1
AUR62007478 Chenopodium quinoa HOM05D006860 ORTHO05D009547 4.9e-11 72.8 139 36.7
BcaNung02492 Brassica carinata HOM05D006860 ORTHO05D015488 6.4e-11 72.4 247 27.1
C07p51900 Brassica napus HOM05D006860 ORTHO05D015488 6.4e-11 72.4 247 27.1
C07p51920 Brassica napus HOM05D006860 ORTHO05D015488 1.1e-10 71.6 251 27.9
BolC7t45692H Brassica oleracea HOM05D006860 ORTHO05D015488 1.1e-10 71.6 251 27.9
BolC7t45689H Brassica oleracea HOM05D006860 ORTHO05D015488 1.4e-10 71.2 247 26.7
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 1.6e-09 67.8 62 56.5
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 3.5e-09 66.6 62 53.2
EL10Ac8g19726 Beta vulgaris HOM05D006860 ORTHO05D009547 7.8e-09 65.5 50 56.0
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 8.6e-08 62.0 72 45.8
Ciclev10018172m.g Citrus clementina HOM05D006860 ORTHO05D009547 7.3e-07 58.9 62 45.2


User provided reference genes

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