Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02160_v3 Cicer arietinum L. HOM05D002237 ORTHO05D002213 4.7e-83 311.2 166 100.0
Medtr2g039320 Medicago truncatula HOM05D002237 ORTHO05D002213 3.3e-36 155.6 199 54.8
TPR.G28379 Trifolium pratense HOM05D002237 ORTHO05D002213 1.3e-35 153.7 199 53.8
Psat1g140840 Pisum sativum HOM05D002237 ORTHO05D002213 6.2e-35 151.4 179 54.2
Lj6g0012536 Lotus japonicus HOM05D002237 ORTHO05D002213 6.7e-29 131.3 198 43.4
TPR.G30764 Trifolium pratense HOM05D002237 ORTHO05D002213 6.7e-29 131.3 176 51.7
VMungo1309G0962 Vigna mungo HOM05D002237 ORTHO05D002213 2.2e-19 99.8 241 35.7
Glyma.15G170100 Glycine max HOM05D002237 ORTHO05D002213 2.0e-17 93.2 251 35.9
Lalb_Chr08g0232161 Lupinus albus HOM05D002237 ORTHO05D002213 1.4e-15 87.0 161 42.2
Phvul.009G232000 Phaseolus vulgaris HOM05D002237 ORTHO05D002213 2.5e-15 86.3 241 34.9
Glyma.09G063300 Glycine max HOM05D002237 ORTHO05D002213 1.4e-13 80.5 260 31.5
Manes.16G101500 Manihot esculenta HOM05D002237 ORTHO05D002213 1.8e-13 80.1 233 33.0
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 5.3e-10 68.6 184 35.3
Prupe.7G209100 Prunus persica HOM05D002237 ORTHO05D002213 6.9e-10 68.2 219 32.9
MSTRG.6063 Avicennia marina HOM05D002237 ORTHO05D002213 1.5e-09 67.0 179 31.8
CiPaw.03G215600 Carya illinoinensis HOM05D002237 ORTHO05D002213 1.0e-08 64.3 219 29.7
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 3.8e-08 62.4 193 30.6
MBI04_g31169_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 5.0e-08 62.0 152 36.2
CiPaw.04G149200 Carya illinoinensis HOM05D002237 ORTHO05D002213 6.5e-08 61.6 204 28.9
SEGI_13547 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 6.5e-08 61.6 131 35.9
MSTRG.1684 Avicennia marina HOM05D002237 ORTHO05D002213 8.5e-08 61.2 159 32.1
CiPaw.03G215700 Carya illinoinensis HOM05D002237 ORTHO05D002213 8.5e-08 61.2 220 29.5
Lj7A676T37 Lonicera japonica HOM05D002237 ORTHO05D002213 8.5e-08 61.2 60 55.0
FAN28G1161 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.9e-07 60.1 38 76.3
FAN23G1561 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.5e-07 59.7 36 77.8
Lj5g0000472 Lotus japonicus HOM05D002237 ORTHO05D002213 2.5e-07 59.7 48 64.6
Manes.03G034300 Manihot esculenta HOM05D002237 ORTHO05D002213 2.5e-07 59.7 219 28.8
Medtr4g126170 Medicago truncatula HOM05D002237 ORTHO05D002213 2.5e-07 59.7 167 33.5
SGA_v2.0_scaffold169G38695 Striga asiatica HOM05D002237 ORTHO05D002213 2.5e-07 59.7 84 41.7
MBI04_g31173_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 3.2e-07 59.3 152 35.5
SEGI_35235 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 3.2e-07 59.3 110 38.2
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 4.2e-07 58.9 112 33.9
MBI04_g31172_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 4.2e-07 58.9 49 67.3
Sp6g18690 Schrenkiella parvula HOM05D002237 ORTHO05D002213 4.2e-07 58.9 64 51.6
SEGI_05314 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 4.2e-07 58.9 110 38.2
Actinidia26073 Actinidia chinensis HOM05D002237 ORTHO05D002213 5.5e-07 58.5 131 33.6
AL52U10060 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 5.5e-07 58.5 64 51.6
AL8G32850 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 5.5e-07 58.5 64 51.6
BcaB05g22304 Brassica carinata HOM05D002237 ORTHO05D002213 5.5e-07 58.5 135 33.3
BcaC03g14188 Brassica carinata HOM05D002237 ORTHO05D002213 5.5e-07 58.5 64 51.6
A02p08820 Brassica napus HOM05D002237 ORTHO05D002213 5.5e-07 58.5 64 51.6
C02p14710 Brassica napus HOM05D002237 ORTHO05D002213 5.5e-07 58.5 64 51.6
BolC2t07596H Brassica oleracea HOM05D002237 ORTHO05D002213 5.5e-07 58.5 64 51.6
BraA02t05949Z Brassica rapa HOM05D002237 ORTHO05D002213 5.5e-07 58.5 64 51.6
vmacro00140 Vaccinium macrocarpon HOM05D002237 ORTHO05D002213 5.5e-07 58.5 126 33.3
AT5G56980 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 7.2e-07 58.2 64 51.6
HanXRQChr07g0192621 Helianthus annuus HOM05D002237 ORTHO05D002213 7.2e-07 58.2 121 35.5
MD15G1207800 Malus domestica HOM05D002237 ORTHO05D002213 7.2e-07 58.2 38 73.7
PGSC0003DMG400035559 Solanum tuberosum HOM05D002237 ORTHO05D002213 7.2e-07 58.2 123 32.5
Aa31LG3G12870 Aethionema arabicum HOM05D002237 ORTHO05D002213 9.4e-07 57.8 65 49.2
BcaC04g20033 Brassica carinata HOM05D002237 ORTHO05D002213 9.4e-07 57.8 64 51.6
BolC9t57710H Brassica oleracea HOM05D002237 ORTHO05D002213 9.4e-07 57.8 64 51.6
COL.COLO4_18195 Corchorus olitorius HOM05D002237 ORTHO05D002213 9.4e-07 57.8 34 76.5
Haze_25915 Corylus avellana HOM05D002237 ORTHO05D002213 9.4e-07 57.8 206 30.6
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 9.4e-07 57.8 178 32.6
SEGI_14039 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 9.4e-07 57.8 110 38.2
SGA_v2.0_scaffold163G38027 Striga asiatica HOM05D002237 ORTHO05D002213 9.4e-07 57.8 126 34.9
TWI63G0843 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 9.4e-07 57.8 64 53.1
CiPaw.15G038600 Carya illinoinensis HOM05D002237 ORTHO05D002213 1.2e-06 57.4 40 70.0
Gohir.A07G011600 Gossypium hirsutum HOM05D002237 ORTHO05D002213 1.2e-06 57.4 59 55.9
Gohir.D07G011400 Gossypium hirsutum HOM05D002237 ORTHO05D002213 1.2e-06 57.4 59 55.9
Gorai.001G012100 Gossypium raimondii HOM05D002237 ORTHO05D002213 1.2e-06 57.4 59 55.9
SalBow4G0805 Salvia bowleyana HOM05D002237 ORTHO05D002213 1.2e-06 57.4 76 46.1
Sed0018033 Sechium edule HOM05D002237 ORTHO05D002213 1.2e-06 57.4 122 35.2
Thecc.09G088400 Theobroma cacao HOM05D002237 ORTHO05D002213 1.2e-06 57.4 36 72.2
Sed0011201 Sechium edule HOM05D002237 ORTHO05D002213 1.6e-06 57.0 69 44.9
Sopen05g016140 Solanum pennellii HOM05D002237 ORTHO05D002213 1.6e-06 57.0 189 31.2
THA.LOC104817760 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 1.6e-06 57.0 98 41.8
TAR626G0565 Trochodendron aralioides HOM05D001162 ORTHO05D001218 1.6e-06 57.0 127 33.9
Aqoxy7G01205 Aquilegia oxysepala HOM05D002237 ORTHO05D002213 2.1e-06 56.6 51 64.7
Carub.0008s1746 Capsella rubella HOM05D002237 ORTHO05D002213 2.1e-06 56.6 64 50.0
FvH4_1g07560 Fragaria vesca HOM05D002237 ORTHO05D002213 2.1e-06 56.6 36 75.0
FAN19G3195 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.1e-06 56.6 36 75.0
FAN26G0211 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.1e-06 56.6 36 75.0
FAN26G2487 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.1e-06 56.6 36 75.0
Gohir.D13G199000 Gossypium hirsutum HOM05D002237 ORTHO05D002213 2.1e-06 56.6 118 35.6
CSS0010318 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 2.7e-06 56.2 33 78.8
Duzib168G2392 Durio zibethinus HOM05D002237 ORTHO05D002213 2.7e-06 56.2 33 75.8
Migut.E01567 Erythranthe guttata HOM05D002237 ORTHO05D002213 2.7e-06 56.2 89 40.4
Migut.J00621 Erythranthe guttata HOM05D002237 ORTHO05D002213 2.7e-06 56.2 33 78.8
FvH4_2g31830 Fragaria vesca HOM05D002237 ORTHO05D002213 2.7e-06 56.2 61 49.2
FAN20G2042 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.7e-06 56.2 61 54.1
FAN24G2308 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.7e-06 56.2 61 49.2
FAN27G2230 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.7e-06 56.2 61 54.1
HanXRQChr06g0178571 Helianthus annuus HOM05D002237 ORTHO05D002213 2.7e-06 56.2 135 36.3
Sp4g05990 Schrenkiella parvula HOM05D002237 ORTHO05D002213 2.7e-06 56.2 64 50.0
A10p14300 Brassica napus HOM05D002237 ORTHO05D002213 3.6e-06 55.8 64 50.0
BraA10t43521Z Brassica rapa HOM05D002237 ORTHO05D002213 3.6e-06 55.8 64 50.0
Cpa.g.sc7.182 Carica papaya HOM05D002237 ORTHO05D002213 3.6e-06 55.8 46 54.3
Dinv27989 Davidia involucrata HOM05D002237 ORTHO05D002213 3.6e-06 55.8 80 42.5
Thhalv10013847m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 3.6e-06 55.8 64 51.6
Lsat_1_v5_gn_6_13421 Lactuca sativa HOM05D002237 ORTHO05D002213 3.6e-06 55.8 152 30.9
MBI04_g31168_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 3.6e-06 55.8 38 71.1
PSO210G3168 Papaver somniferum HOM05D002237 ORTHO05D002213 3.6e-06 55.8 221 29.0
TAR624G1451 Trochodendron aralioides HOM05D002237 ORTHO05D002213 3.6e-06 55.8 58 56.9
Thhalv10025915m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 4.7e-06 55.5 62 50.0
Nitab4.5_0003648g0010 Nicotiana tabacum HOM05D002237 ORTHO05D002213 4.7e-06 55.5 119 31.9
PSO210G1183 Papaver somniferum HOM05D002237 ORTHO05D002213 4.7e-06 55.5 221 28.1
Psat4g015680 Pisum sativum HOM05D002237 ORTHO05D002213 4.7e-06 55.5 203 31.0
PGR142G4283 Punica granatum HOM05D002237 ORTHO05D002213 4.7e-06 55.5 49 57.1
Solyc05g018820.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 4.7e-06 55.5 180 31.7
AT2G26110 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 6.1e-06 55.1 175 29.7
BcaC09g50665 Brassica carinata HOM05D002237 ORTHO05D002213 6.1e-06 55.1 62 50.0
BcaNung05239 Brassica carinata HOM05D002237 ORTHO05D002213 6.1e-06 55.1 62 50.0
C01p21920 Brassica napus HOM05D002237 ORTHO05D002213 6.1e-06 55.1 62 50.0
BolC1t02119H Brassica oleracea HOM05D002237 ORTHO05D002213 6.1e-06 55.1 62 50.0
CARHR114840 Cardamine hirsuta HOM05D002237 ORTHO05D002213 6.1e-06 55.1 170 30.0
Cpa.g.sc61.39 Carica papaya HOM05D002237 ORTHO05D002213 6.1e-06 55.1 56 58.9
DCAR_000797 Daucus carota HOM05D002237 ORTHO05D002213 6.1e-06 55.1 77 39.0
ECA233G4745 Erigeron canadensis HOM05D002237 ORTHO05D002213 6.1e-06 55.1 83 38.6
FAN15G1416 Fragaria x ananassa HOM05D002237 ORTHO05D002213 6.1e-06 55.1 101 36.6
Gorai.013G227500 Gossypium raimondii HOM05D002237 ORTHO05D002213 6.1e-06 55.1 118 34.7
Lj7P270T5 Lonicera japonica HOM05D002237 ORTHO05D002213 6.1e-06 55.1 79 39.2
TAR636G2243 Trochodendron aralioides HOM05D002237 ORTHO05D002213 6.1e-06 55.1 61 50.8
Actinidia25249 Actinidia chinensis HOM05D002237 ORTHO05D002213 7.9e-06 54.7 117 35.0
MSTRG.14057 Avicennia marina HOM05D002237 ORTHO05D002213 7.9e-06 54.7 94 38.3
Ciclev10009087m.g Citrus clementina HOM05D002237 ORTHO05D002213 7.9e-06 54.7 74 41.9
Dinv22895 Davidia involucrata HOM05D002237 ORTHO05D002213 7.9e-06 54.7 128 28.9
Gohir.A13G193300 Gossypium hirsutum HOM05D002237 ORTHO05D002213 7.9e-06 54.7 121 36.4
Oeu016763.1 Olea europaea HOM05D002237 ORTHO05D002213 7.9e-06 54.7 36 66.7
Prupe.1G411600 Prunus persica HOM05D002237 ORTHO05D002213 7.9e-06 54.7 115 34.8
Rhsim05G0020400 Rhododendron simsii HOM05D002237 ORTHO05D002213 7.9e-06 54.7 35 74.3
RcHm_v2.0_Chr6g0310991 Rosa chinensis HOM05D002237 ORTHO05D002213 7.9e-06 54.7 65 46.2
Sp7g24150 Schrenkiella parvula HOM05D002237 ORTHO05D002213 7.9e-06 54.7 62 48.4


User provided reference genes

Program Settings