Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 7.0e-163 577.4 330 100.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.0e-89 334.3 305 63.0
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.3e-87 327.4 327 59.0
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 4.2e-83 312.4 431 45.9
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 3.0e-81 306.2 414 48.3
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.4e-78 297.4 332 54.5
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.8e-73 280.4 416 46.4
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 5.1e-73 278.9 304 56.6
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.4e-70 270.0 327 51.7
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 2.2e-68 263.5 408 43.1
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.3e-63 247.7 192 69.3
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 1.7e-55 220.7 372 42.5
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.5e-40 171.0 270 41.5
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.9e-39 166.8 267 43.8
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.1e-38 164.9 265 41.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 4.1e-38 162.9 255 42.4
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 7.0e-38 162.2 285 38.6
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.6e-37 161.0 268 41.0
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 3.5e-37 159.8 260 41.5
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 2.3e-36 157.1 202 48.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.6e-36 155.6 303 38.0
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.5e-35 154.5 303 36.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.9e-35 154.1 225 43.6
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.6e-35 152.5 304 38.2
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.2e-34 151.4 262 40.8
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-34 150.6 300 38.0
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 2.1e-34 150.6 277 40.4
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 2.8e-34 150.2 258 39.5
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 3.6e-34 149.8 308 37.0
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 4.7e-34 149.4 292 36.0
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.8e-33 147.5 273 39.2
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.3e-33 147.1 264 39.4
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 3.1e-33 146.7 320 34.7
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 5.2e-33 146.0 311 35.4
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 5.2e-33 146.0 307 35.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.5e-32 144.4 312 34.9
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.0e-32 144.1 267 38.6
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.6e-32 143.7 124 58.9
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.4e-32 143.3 264 38.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 3.4e-32 143.3 218 43.1
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 7.5e-32 142.1 263 37.3
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 7.5e-32 142.1 282 36.9
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.5e-32 142.1 299 36.5
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.2e-31 140.6 272 36.4
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.9e-31 140.2 350 32.3
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.7e-31 139.8 258 36.8
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 8.3e-31 138.7 278 35.3
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.1e-30 138.3 215 40.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.4e-30 137.9 316 32.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 3.2e-30 136.7 276 37.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 3.2e-30 136.7 274 33.6
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 4.1e-30 136.3 259 38.6
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.1e-30 136.3 290 34.8
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.2e-29 134.8 304 33.2
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.6e-29 134.4 258 37.6
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.5e-29 133.3 324 32.4
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 7.8e-29 132.1 132 50.8
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.7e-28 131.0 229 36.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 6.6e-28 129.0 190 41.1
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.1e-27 128.3 121 55.4
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.2e-26 124.8 212 37.7
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.6e-26 123.2 278 36.0
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 6.2e-26 122.5 250 36.8
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 6.2e-26 122.5 278 36.0
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 6.2e-26 122.5 371 31.0
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.4e-25 121.3 232 37.1
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.4e-25 121.3 239 36.4
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.8e-25 120.9 270 37.0
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 3.1e-25 120.2 278 34.5
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.0e-25 119.8 121 51.2
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 4.0e-25 119.8 274 35.0
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.2e-25 119.4 117 56.4
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.5e-24 117.9 281 35.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.0e-24 117.5 129 49.6
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 3.4e-24 116.7 125 48.0
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 3.4e-24 116.7 296 31.8
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.4e-24 116.3 258 35.3
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 7.5e-24 115.5 311 32.2
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 9.8e-24 115.2 322 31.4
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.3e-23 114.8 245 36.3
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.7e-23 114.4 290 32.1
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.7e-23 114.4 272 32.0
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 2.2e-23 114.0 126 48.4
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 4.9e-23 112.8 143 48.3
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.4e-22 111.3 263 33.8
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.9e-22 110.9 214 32.7
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.4e-22 110.5 227 36.6
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.0e-20 103.6 108 48.1
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.1e-18 97.4 286 27.6
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 3.1e-17 93.6 253 31.2
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 3.4e-16 90.1 155 40.0
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.2e-15 87.4 140 37.9
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 5.4e-14 82.8 81 50.6
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 5.4e-14 82.8 125 37.6
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.6e-13 81.3 191 32.5
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.1e-13 80.9 180 32.8
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 7.8e-13 79.0 143 35.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 7.8e-13 79.0 143 35.7
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 3.9e-12 76.6 244 27.5
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 8.6e-12 75.5 318 27.7
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 4.3e-11 73.2 191 29.8
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 4.3e-11 73.2 237 30.0
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 5.6e-11 72.8 239 28.5
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.4e-09 68.2 66 56.1
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.4e-09 68.2 127 32.3
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 6.8e-09 65.9 178 25.8
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.6e-08 63.9 225 26.7
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 5.8e-08 62.8 196 25.0
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 1.7e-07 61.2 113 34.5


User provided reference genes

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