Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 1.4e-40 169.9 135 100.0
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 6.0e-36 154.5 135 81.5
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 9.6e-34 147.1 133 86.5
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 1.8e-32 142.9 135 85.2
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 2.4e-32 142.5 133 77.4
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 5.8e-31 137.9 133 72.9
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 1.0e-27 127.1 133 72.9
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 1.5e-26 123.2 134 82.8
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 5.6e-26 121.3 130 75.4
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 4.8e-25 118.2 136 75.0
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 6.2e-25 117.9 133 79.7
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 1.5e-23 113.2 131 73.3
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 2.6e-23 112.5 132 72.7
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 5.8e-23 111.3 134 69.4
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 5.8e-23 111.3 134 58.2
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 7.6e-23 110.9 131 73.3
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 7.6e-23 110.9 131 73.3
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 7.6e-23 110.9 131 67.9
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 7.6e-23 110.9 141 64.5
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 1.3e-22 110.2 134 68.7
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 1.3e-22 110.2 139 65.5
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.7e-22 109.8 133 59.4
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.7e-22 109.8 133 59.4
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 1.7e-22 109.8 134 68.7
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 2.9e-22 109.0 131 68.7
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 2.9e-22 109.0 134 61.2
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 2.9e-22 109.0 135 65.2
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 4.9e-22 108.2 136 70.6
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 6.4e-22 107.8 133 70.7
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 6.4e-22 107.8 133 70.7
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.4e-21 106.7 138 65.9
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 1.9e-21 106.3 140 58.6
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 1.9e-21 106.3 134 60.4
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 2.4e-21 105.9 134 59.7
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 4.2e-21 105.1 131 75.6
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 4.2e-21 105.1 65 83.1
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 4.2e-21 105.1 134 61.9
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 7.1e-21 104.4 133 62.4
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 9.3e-21 104.0 134 69.4
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 9.3e-21 104.0 141 70.2
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 3.5e-20 102.1 128 75.0
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 4.6e-20 101.7 136 61.8
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 4.6e-20 101.7 136 61.8
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 6.0e-20 101.3 135 68.1
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 7.9e-20 100.9 135 68.1
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.8e-19 99.8 135 71.9
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 1.8e-19 99.8 142 59.9
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 2.3e-19 99.4 134 59.7
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 2.3e-19 99.4 127 70.9
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 6.7e-19 97.8 128 70.3
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 1.1e-18 97.1 129 62.8
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 1.9e-18 96.3 135 68.9
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.9e-18 96.3 139 54.7
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 1.9e-18 96.3 138 71.0
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.9e-18 96.3 130 55.4
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 2.5e-18 95.9 130 72.3
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 1.6e-17 93.2 133 61.7
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 2.1e-17 92.8 129 65.9
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 4.8e-17 91.7 131 57.3
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 4.8e-17 91.7 131 64.9
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 4.8e-17 91.7 134 59.0
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 4.8e-17 91.7 129 62.0
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 8.1e-17 90.9 131 62.6
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 1.1e-16 90.5 130 67.7
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 1.1e-16 90.5 130 67.7
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 1.1e-16 90.5 130 67.7
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 1.1e-16 90.5 130 67.7
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 1.1e-16 90.5 130 60.8
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 3.1e-16 89.0 128 68.0
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 3.1e-16 89.0 127 66.1
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 3.1e-16 89.0 130 68.5
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 5.3e-16 88.2 127 66.9
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 6.9e-16 87.8 130 61.5
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 1.2e-15 87.0 128 62.5
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 1.5e-15 86.7 134 56.7
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 2.6e-15 85.9 131 55.0
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 5.8e-15 84.7 143 50.3
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 9.9e-15 84.0 129 69.0
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 1.3e-14 83.6 134 60.4
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.8e-14 82.0 165 56.4
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 7.1e-13 77.8 123 52.0
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 2.1e-12 76.3 158 46.8
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 3.5e-12 75.5 137 65.7
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 7.9e-12 74.3 127 49.6
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 3.9e-11 72.0 58 58.6
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 5.1e-11 71.6 128 67.2
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 1.3e-09 67.0 100 68.0
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 4.0e-08 62.0 97 69.1
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 9.0e-08 60.8 91 74.7
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 3.4e-07 58.9 91 69.2
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 7.6e-07 57.8 102 54.9
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 1.0e-06 57.4 33 81.8
CDE02G2090 Ceratophyllum demersum HOM05D002859 ORTHO05D003120 1.7e-06 56.6 105 73.3
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 2.2e-06 56.2 138 60.1
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 2.2e-06 56.2 90 82.2
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.8e-06 55.5 134 29.9


User provided reference genes

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