Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 6.7e-76 287.3 153 100.0
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 1.2e-72 276.6 153 94.1
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 5.9e-72 274.2 151 93.4
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 4.2e-70 268.1 153 88.2
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.6e-69 266.2 151 90.1
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 7.9e-69 263.8 151 89.4
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 7.9e-69 263.8 151 90.1
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 5.7e-67 257.7 151 84.8
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 7.4e-67 257.3 151 86.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.8e-66 255.4 153 83.0
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 2.4e-65 252.3 151 84.8
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.1e-65 251.5 151 83.4
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 7.0e-65 250.8 151 82.8
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.2e-64 250.0 151 82.8
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.2e-64 250.0 151 82.8
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.2e-64 250.0 151 82.8
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.6e-64 249.6 151 83.4
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.6e-64 249.6 151 82.8
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.6e-64 249.6 151 81.5
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 2.0e-64 249.2 151 82.8
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 2.0e-64 249.2 151 82.8
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 2.0e-64 249.2 151 83.4
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 2.0e-64 249.2 151 83.4
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.5e-64 248.4 151 82.1
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 3.5e-64 248.4 151 82.8
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 5.9e-64 247.7 151 79.5
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 7.7e-64 247.3 151 81.5
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.3e-63 246.5 151 82.1
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.3e-63 246.5 151 80.1
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 1.3e-63 246.5 151 81.5
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.9e-63 245.4 151 79.5
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 2.9e-63 245.4 151 80.1
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 2.9e-63 245.4 151 80.1
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.9e-63 245.4 151 79.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 2.9e-63 245.4 151 81.5
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 2.9e-63 245.4 151 79.5
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 3.8e-63 245.0 151 79.5
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 3.8e-63 245.0 151 79.5
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 3.8e-63 245.0 151 80.1
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 5.0e-63 244.6 151 80.1
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 5.0e-63 244.6 151 81.5
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 6.5e-63 244.2 151 82.1
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 8.5e-63 243.8 151 78.8
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 8.5e-63 243.8 151 78.8
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 8.5e-63 243.8 151 80.1
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.1e-62 243.4 151 78.1
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.1e-62 243.4 151 80.1
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.5e-62 243.0 151 81.5
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.9e-62 242.7 151 79.5
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 3.2e-62 241.9 151 79.5
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.2e-62 241.9 151 79.5
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.2e-62 241.9 151 78.1
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.2e-62 241.5 148 81.8
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.2e-62 241.5 148 81.8
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.2e-62 241.5 151 78.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 4.2e-62 241.5 151 78.1
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 5.5e-62 241.1 151 78.1
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 7.2e-62 240.7 151 80.1
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 9.4e-62 240.4 151 76.8
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 9.4e-62 240.4 151 78.8
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 9.4e-62 240.4 151 77.5
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 9.4e-62 240.4 151 77.5
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.2e-61 240.0 153 77.8
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.2e-61 240.0 148 81.1
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.2e-61 240.0 151 77.5
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.2e-61 240.0 151 77.5
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.6e-61 239.6 151 80.1
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.6e-61 239.6 151 76.8
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 2.7e-61 238.8 151 79.5
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 2.7e-61 238.8 151 78.1
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 2.7e-61 238.8 151 78.1
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 2.7e-61 238.8 151 78.1
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.7e-61 238.8 151 76.2
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.6e-61 238.4 151 77.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.6e-61 238.4 151 76.2
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 3.6e-61 238.4 151 77.5
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 3.6e-61 238.4 151 80.1
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 4.7e-61 238.0 152 77.6
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 4.7e-61 238.0 150 79.3
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 4.7e-61 238.0 153 77.1
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 8.0e-61 237.3 151 75.5
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.0e-60 236.9 151 76.2
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.8e-60 236.1 151 77.5
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 2.3e-60 235.7 151 78.8
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 3.0e-60 235.3 151 79.5
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 3.0e-60 235.3 151 76.8
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 6.7e-60 234.2 151 76.2
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.7e-60 234.2 151 77.5
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 6.7e-60 234.2 149 77.9
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.1e-59 233.4 151 74.2
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.0e-59 232.6 153 75.8
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 4.4e-59 231.5 151 78.8
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 5.7e-59 231.1 151 76.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.8e-58 228.8 146 76.7
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 1.4e-57 226.5 141 78.7
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.8e-57 226.1 139 80.6
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 5.3e-57 224.6 150 74.0
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.3e-55 219.9 152 70.4
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 5.0e-55 218.0 154 70.8
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.5e-55 217.6 141 75.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 6.5e-55 217.6 152 70.4
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 3.2e-54 215.3 140 72.9
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 4.7e-53 211.5 132 78.8
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 4.7e-53 211.5 140 74.3
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 4.7e-53 211.5 152 67.8
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 8.0e-53 210.7 150 71.3
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.8e-52 207.6 130 78.5
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 8.8e-52 207.2 136 74.3
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 3.1e-49 198.7 118 87.3
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 5.4e-49 198.0 117 84.6
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.2e-48 196.8 131 74.0
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 3.5e-48 195.3 151 62.9
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 4.5e-48 194.9 126 75.4
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.1e-46 190.3 151 63.6
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 2.1e-45 186.0 120 78.3
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.7e-45 185.7 151 61.6
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 6.8e-44 181.0 117 77.8
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.0e-43 179.5 106 83.0
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 2.6e-43 179.1 106 84.0
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.8e-42 175.6 106 80.2
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 4.1e-41 171.8 150 56.7
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 5.4e-41 171.4 129 63.6
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.5e-38 163.3 127 70.1
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.9e-30 136.3 89 75.3
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.9e-26 121.7 121 47.9
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 6.6e-15 84.7 106 50.0
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 1.9e-09 66.6 117 44.4


User provided reference genes

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