Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 1.5e-60 236.1 127 100.0
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 2.4e-50 202.2 126 84.9
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 9.0e-50 200.3 126 85.7
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.3e-48 196.4 126 83.3
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 6.9e-42 174.1 125 71.2
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 1.2e-38 163.3 126 65.9
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 1.0e-37 160.2 126 65.1
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 1.3e-37 159.8 126 63.5
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 8.7e-37 157.1 126 64.3
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 5.8e-33 144.4 126 60.3
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 9.9e-33 143.7 126 60.3
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 2.7e-30 135.6 126 54.8
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 2.7e-30 135.6 126 54.8
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 4.6e-30 134.8 126 55.6
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.8e-29 132.9 126 54.0
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 3.9e-29 131.7 126 54.0
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 8.7e-29 130.6 126 54.8
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 5.6e-28 127.9 126 53.2
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.7e-27 125.2 126 51.6
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 1.1e-26 123.6 126 50.8
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 1.8e-26 122.9 126 51.6
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.0e-26 121.7 126 50.8
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 5.3e-26 121.3 127 48.8
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 6.9e-26 120.9 126 50.0
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 9.0e-26 120.6 127 51.2
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 1.2e-25 120.2 126 48.4
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.6e-25 119.0 126 50.8
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.6e-25 119.0 126 50.8
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 3.4e-25 118.6 126 50.8
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 4.5e-25 118.2 126 50.8
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 5.8e-25 117.9 126 51.6
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.0e-24 117.1 126 52.4
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.3e-24 116.7 126 51.6
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 2.2e-24 115.9 126 50.0
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 2.2e-24 115.9 126 49.2
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 3.8e-24 115.2 126 47.6
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 4.9e-24 114.8 126 50.0
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 1.1e-23 113.6 126 50.0
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 1.4e-23 113.2 126 52.4
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 2.5e-23 112.5 125 46.4
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 4.2e-23 111.7 126 47.6
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 5.5e-23 111.3 151 43.7
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 1.6e-22 109.8 126 49.2
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 2.1e-22 109.4 126 50.0
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.5e-22 108.6 131 45.8
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 4.6e-22 108.2 126 48.4
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 4.6e-22 108.2 126 48.4
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 4.6e-22 108.2 177 38.4
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 1.3e-21 106.7 126 50.0
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 1.3e-21 106.7 126 49.2
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 2.3e-21 105.9 126 46.8
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 3.9e-21 105.1 126 45.2
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 6.7e-21 104.4 126 47.6
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 8.7e-21 104.0 125 44.8
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 1.9e-20 102.8 126 42.9
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 9.7e-20 100.5 126 50.0
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 9.7e-20 100.5 131 45.8
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.2e-19 99.4 126 40.5
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 2.8e-19 99.0 126 43.7
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 3.7e-19 98.6 125 44.0
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.1e-18 97.1 144 42.4
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 1.2e-17 93.6 126 43.7
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 1.0e-16 90.5 120 40.0
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 1.7e-16 89.7 122 36.9
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 2.2e-16 89.4 106 43.4
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 5.0e-16 88.2 126 38.9
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.1e-15 87.0 163 38.0
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.9e-15 86.3 100 47.0
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 4.2e-15 85.1 95 50.5
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 9.4e-15 84.0 119 38.7
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.2e-14 83.6 101 43.6
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 4.6e-14 81.6 126 39.7
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 6.1e-14 81.3 126 39.7
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 1.0e-13 80.5 126 38.1
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 3.9e-13 78.6 105 41.9
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 5.1e-13 78.2 123 34.1
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 1.3e-11 73.6 104 42.3
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 1.8e-10 69.7 123 34.1
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 5.3e-10 68.2 127 36.2
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 9.1e-10 67.4 89 43.8
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 9.1e-10 67.4 97 42.3
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.2e-09 67.0 69 46.4
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 2.2e-08 62.8 100 39.0
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 2.2e-08 62.8 55 58.2
arahy.Tifrunner.gnm1.ann1.J5XFRX Arachis hypogaea HOM05D011742 ORTHO05D014450 8.5e-08 60.8 55 54.5
Actinidia07549 Actinidia chinensis HOM05D007474 ORTHO05D009367 3.6e-06 55.5 47 59.6


User provided reference genes

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