Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.6e-229 798.5 437 100.0
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.7e-100 370.5 247 83.0
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.2e-88 331.3 244 75.4
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 2.1e-53 214.2 197 61.4
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 2.1e-53 214.2 197 61.4
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 6.0e-53 212.6 197 59.9
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 1.0e-52 211.8 197 61.9
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 4.0e-49 199.9 197 57.9
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-45 188.3 185 59.5
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 3.9e-36 156.8 193 48.2
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 1.0e-31 142.1 208 41.8
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.9e-30 137.9 208 41.8
TPR.G32241 Trifolium pratense HOM05D000984 ORTHO05D000921 1.9e-30 137.9 198 46.0
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.8e-26 123.2 198 40.9
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.4e-25 121.7 208 39.9
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 6.9e-25 119.4 196 38.3
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 1.2e-24 118.6 200 38.5
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.2e-24 118.6 198 40.4
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.0e-23 115.5 212 37.7
Ca_02503_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.1e-22 112.1 96 74.0
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 1.9e-22 111.3 204 38.2
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 9.3e-22 109.0 192 36.5
TWI74G1594 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 2.1e-21 107.8 215 36.7
TPR.G10504 Trifolium pratense HOM05D000665 ORTHO05D000921 3.0e-20 104.0 63 77.8
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 7.4e-19 99.4 209 31.1
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 1.6e-18 98.2 193 34.2
Ca_14547_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.1e-17 95.5 71 70.4
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 9.0e-17 92.4 200 31.5
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-16 91.3 191 28.3
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 5.9e-16 89.7 187 35.3
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 7.7e-16 89.4 191 28.3
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 7.7e-16 89.4 191 28.3
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 1.0e-15 89.0 209 29.2
Medtr3g019060 Medicago truncatula HOM05D008473 ORTHO05D000921 1.0e-15 89.0 171 35.1
Cfa007688 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.3e-15 88.6 213 30.0
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 1.3e-15 88.6 207 33.3
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 2.2e-15 87.8 194 33.5
Dinv10275 Davidia involucrata HOM05D008473 ORTHO05D000921 2.9e-15 87.4 191 31.9
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 2.9e-15 87.4 191 27.7
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 2.9e-15 87.4 208 35.1
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.8e-15 87.0 201 32.3
Ca_02052_v3 Cicer arietinum L. HOM05D008473 ORTHO05D000921 5.0e-15 86.7 95 46.3
Cfa005675 Carpinus fangiana HOM05D011725 ORTHO05D016914 6.5e-15 86.3 213 30.0
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 6.5e-15 86.3 218 28.9
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 8.5e-15 85.9 191 32.5
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.1e-14 85.5 188 30.9
Lsat_1_v5_gn_5_73681 Lactuca sativa HOM05D003171 ORTHO05D000921 1.4e-14 85.1 210 29.5
Cfa017593 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.9e-14 84.7 245 27.3
FAN22G1922 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.9e-14 84.7 194 28.9
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 1.9e-14 84.7 206 35.0
ECA246G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.5e-14 84.3 206 28.2
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.5e-14 84.3 192 29.7
FAN23G0960 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.6e-13 81.6 184 28.3
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 2.1e-13 81.3 193 32.1
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 2.1e-13 81.3 194 33.5
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 2.7e-13 80.9 194 33.0
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 2.7e-13 80.9 194 33.0
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 2.7e-13 80.9 194 33.5
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.7e-13 80.9 200 30.5
Cfa002544 Carpinus fangiana HOM05D011725 ORTHO05D016914 3.6e-13 80.5 196 30.6
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 3.6e-13 80.5 194 33.5
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 3.6e-13 80.5 194 33.5
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 6.1e-13 79.7 174 27.0
QL02p010900 Quercus lobata HOM05D003171 ORTHO05D000921 6.1e-13 79.7 172 34.3
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 7.9e-13 79.3 200 30.5
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 1.0e-12 79.0 128 37.5
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 1.0e-12 79.0 248 27.4
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.0e-12 79.0 189 31.2
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 1.0e-12 79.0 204 30.9
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 1.4e-12 78.6 188 26.6
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 2.3e-12 77.8 204 30.4
GSVIVG01021695001 Vitis vinifera HOM05D008473 ORTHO05D000921 3.0e-12 77.4 102 44.1
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 3.9e-12 77.0 198 31.3
ECA233G3457 Erigeron canadensis HOM05D003171 ORTHO05D000921 3.9e-12 77.0 206 27.2
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 3.9e-12 77.0 190 30.0
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 5.1e-12 76.6 188 29.3
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.7e-12 76.3 204 28.9
Atru.chr10.354 Acer truncatum HOM05D028950 ORTHO05D000921 8.8e-12 75.9 174 28.7
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 1.1e-11 75.5 225 29.8
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 1.1e-11 75.5 225 29.8
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 3.3e-11 73.9 192 30.2
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 5.7e-11 73.2 197 27.9
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 5.7e-11 73.2 128 36.7
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 5.7e-11 73.2 199 29.1
Cfa019942 Carpinus fangiana HOM05D020463 ORTHO05D022255 7.4e-11 72.8 199 32.2
TWI53G0348 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 7.4e-11 72.8 158 34.2
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 9.7e-11 72.4 192 29.2
CSS0032086 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 9.7e-11 72.4 195 28.2
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 1.3e-10 72.0 203 26.6
Dinv10828 Davidia involucrata HOM05D008473 ORTHO05D000921 1.3e-10 72.0 174 29.9
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 1.3e-10 72.0 190 27.4
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-10 71.6 199 29.1
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-10 71.6 199 29.1
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-10 71.6 199 29.1
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.2e-10 71.2 196 27.6
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 2.2e-10 71.2 172 31.4
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 2.8e-10 70.9 196 28.6
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 2.8e-10 70.9 219 26.9
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 2.8e-10 70.9 226 28.3
CSS0006884 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.7e-10 70.5 193 32.1
CiPaw.10G123700 Carya illinoinensis HOM05D003171 ORTHO05D000921 3.7e-10 70.5 200 27.5
CSS0046487 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.3e-10 69.7 193 27.5
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 6.3e-10 69.7 204 24.5
CSS0034290 Camellia sinensis var. sinensis HOM05D008473 ORTHO05D000921 8.2e-10 69.3 180 26.7
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 8.2e-10 69.3 179 27.9
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-09 68.9 196 28.6
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-09 68.9 196 28.6
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-09 68.9 196 27.0
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.4e-09 68.6 193 29.0
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 1.4e-09 68.6 155 32.3
TPR.G9865 Trifolium pratense HOM05D003171 ORTHO05D000921 1.4e-09 68.6 102 39.2
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.4e-09 68.6 201 28.9
MD03G1270400 Malus domestica HOM05D003171 ORTHO05D000921 2.4e-09 67.8 215 26.0
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 2.4e-09 67.8 210 25.2
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 3.1e-09 67.4 52 50.0
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.1e-09 67.4 184 26.1
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 3.1e-09 67.4 185 27.6
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 4.1e-09 67.0 201 29.9
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 5.3e-09 66.6 197 27.4
Dinv06146 Davidia involucrata HOM05D003171 ORTHO05D000921 5.3e-09 66.6 68 45.6
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 5.3e-09 66.6 199 27.6
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 5.3e-09 66.6 196 27.6
Dinv17515 Davidia involucrata HOM05D008473 ORTHO05D000921 5.3e-09 66.6 98 38.8
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 5.3e-09 66.6 190 27.4
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 5.3e-09 66.6 184 28.3
HanXRQChr13g0396681 Helianthus annuus HOM05D000665 ORTHO05D000921 6.9e-09 66.2 197 28.9
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 6.9e-09 66.2 196 28.1
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 9.1e-09 65.9 196 28.6
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.5e-08 65.1 196 27.6
PGR042G0711 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-08 65.1 210 25.2
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 2.6e-08 64.3 194 27.8
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 2.6e-08 64.3 216 26.4
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 2.6e-08 64.3 211 24.6
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.4e-08 63.9 208 26.0
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 3.4e-08 63.9 191 24.1
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 3.4e-08 63.9 195 29.7
arahy.Tifrunner.gnm1.ann1.QX6E0G Arachis hypogaea HOM05D008473 ORTHO05D000921 5.9e-08 63.2 173 30.1
PGR031G0788 Punica granatum HOM05D003171 ORTHO05D000921 5.9e-08 63.2 218 26.1
arahy.Tifrunner.gnm1.ann1.PZ3VRY Arachis hypogaea HOM05D000599 ORTHO05D000554 1.0e-07 62.4 208 29.3
COL.COLO4_13994 Corchorus olitorius HOM05D008473 ORTHO05D016003 1.0e-07 62.4 155 27.1
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-07 62.4 216 25.5
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-07 62.4 216 25.9
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-07 62.4 216 25.9
QL06p025400 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-07 62.4 177 32.2
Cc01_g10760 Coffea canephora HOM05D000665 ORTHO05D000921 1.3e-07 62.0 201 28.4
PGR042G3316 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-07 62.0 218 25.7
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-07 62.0 216 26.4
CSS0035449 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.7e-07 61.6 200 26.5
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-07 61.6 216 26.4
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 2.2e-07 61.2 113 31.0
FAN03G0665 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.9e-07 60.8 74 41.9
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 3.8e-07 60.5 209 27.8
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 5.0e-07 60.1 191 26.2
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 5.0e-07 60.1 189 25.4
Dinv14632 Davidia involucrata HOM05D008473 ORTHO05D000921 6.5e-07 59.7 99 39.4
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 1.1e-06 58.9 210 27.1
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-06 58.5 200 27.0
QL02p005994 Quercus lobata HOM05D000034 ORTHO05D000037 1.4e-06 58.5 122 36.1
Ciclev10033478m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.9e-06 58.2 172 26.7
Dinv36872 Davidia involucrata HOM05D008473 ORTHO05D000921 1.9e-06 58.2 108 33.3
TAR628G0209 Trochodendron aralioides HOM05D015137 ORTHO05D016484 1.9e-06 58.2 187 24.6
Ciclev10010186m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.5e-06 57.8 49 49.0
Dinv05737 Davidia involucrata HOM05D008473 ORTHO05D000921 2.5e-06 57.8 95 34.7
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 2.5e-06 57.8 209 25.4
Prupe.8G117400 Prunus persica HOM05D003171 ORTHO05D000921 2.5e-06 57.8 192 24.0
PGR044G2193 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-06 57.8 119 31.1
Rhsim09G0057100 Rhododendron simsii HOM05D021294 ORTHO05D000921 2.5e-06 57.8 237 26.6
Dinv15889 Davidia involucrata HOM05D008473 ORTHO05D000921 3.2e-06 57.4 95 35.8
CiPaw.15G091800 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.2e-06 57.0 166 27.7
Dinv26723 Davidia involucrata HOM05D008473 ORTHO05D000921 4.2e-06 57.0 152 32.2
Dinv39796 Davidia involucrata HOM05D008473 ORTHO05D000921 4.2e-06 57.0 147 32.7
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 4.2e-06 57.0 205 22.9
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 5.5e-06 56.6 194 27.8
Dinv37362 Davidia involucrata HOM05D008473 ORTHO05D000921 5.5e-06 56.6 103 36.9
PGR031G1431 Punica granatum HOM05D003171 ORTHO05D000921 5.5e-06 56.6 213 26.3
Dinv24667 Davidia involucrata HOM05D008473 ORTHO05D000921 9.4e-06 55.8 152 31.6


User provided reference genes

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