Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 3.7e-103 378.3 196 100.0
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 6.8e-89 330.9 196 86.2
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.4e-86 322.4 199 85.9
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 3.4e-80 302.0 196 79.6
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 3.5e-77 292.0 196 77.6
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 3.0e-76 288.9 196 78.1
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 1.6e-74 283.1 196 75.5
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 2.3e-73 279.3 196 75.5
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.5e-67 260.0 199 69.8
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.1e-65 253.8 196 68.4
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 7.5e-64 247.7 196 67.3
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 8.6e-60 234.2 138 87.0
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 1.2e-58 230.3 198 64.6
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 2.1e-58 229.6 192 63.5
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.1e-57 227.3 188 62.8
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 1.1e-57 227.3 194 62.9
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.5e-56 223.4 195 62.1
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 7.6e-56 221.1 200 60.5
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.3e-55 220.3 192 63.0
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 3.8e-55 218.8 192 57.8
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 8.4e-55 217.6 196 61.2
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.9e-54 216.5 185 65.9
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 1.9e-54 216.5 191 59.2
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.2e-54 215.7 191 62.8
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 4.6e-53 211.8 192 61.5
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 7.8e-53 211.1 194 59.3
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 7.8e-53 211.1 194 60.8
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 3.9e-52 208.8 192 60.4
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 3.9e-52 208.8 196 61.2
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.7e-52 207.6 192 58.3
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.5e-51 206.8 192 58.9
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 2.5e-51 206.1 192 60.9
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 2.5e-51 206.1 190 59.5
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 3.3e-51 205.7 195 57.4
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.3e-51 205.7 192 56.8
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 5.6e-51 204.9 195 60.0
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 5.6e-51 204.9 192 57.3
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 7.3e-51 204.5 194 58.2
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.6e-50 203.4 195 56.9
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.1e-50 203.0 192 60.4
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 2.8e-50 202.6 191 57.6
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 2.8e-50 202.6 192 58.9
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.6e-50 202.2 192 57.3
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.7e-50 201.8 192 57.8
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.1e-49 200.7 188 55.3
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.4e-49 200.3 197 57.4
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 2.4e-49 199.5 192 58.3
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 3.1e-49 199.1 195 59.0
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 3.1e-49 199.1 193 57.0
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 4.0e-49 198.7 192 55.7
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 5.3e-49 198.4 191 57.1
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.5e-48 196.8 194 56.2
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.0e-48 196.4 198 54.0
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 2.0e-48 196.4 191 57.1
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 3.4e-48 195.7 190 53.2
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 4.4e-48 195.3 191 54.5
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 5.8e-48 194.9 193 54.9
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 7.6e-48 194.5 140 66.4
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 7.6e-48 194.5 192 53.6
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 9.9e-48 194.1 188 55.9
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 9.9e-48 194.1 188 55.9
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 9.9e-48 194.1 199 52.8
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.7e-47 193.4 192 54.7
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 4.9e-47 191.8 191 52.9
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 1.1e-46 190.7 194 53.6
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 1.1e-46 190.7 194 53.6
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 1.4e-46 190.3 197 52.8
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 1.9e-46 189.9 193 55.4
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 7.1e-46 188.0 194 52.6
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 9.3e-46 187.6 194 53.1
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 9.3e-46 187.6 194 52.1
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.2e-45 187.2 194 50.5
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.6e-45 186.8 192 54.2
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.7e-45 186.0 190 55.8
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 3.5e-45 185.7 195 50.8
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 6.0e-45 184.9 195 51.8
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.0e-44 184.1 191 53.9
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.7e-44 183.3 190 55.3
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.7e-44 183.3 193 48.7
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 2.3e-44 183.0 193 54.9
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.3e-44 183.0 166 60.2
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 3.0e-44 182.6 191 49.7
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.5e-43 180.3 194 49.5
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.9e-43 179.9 192 50.5
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.9e-43 179.9 192 50.5
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 2.5e-43 179.5 197 49.2
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 5.6e-43 178.3 197 50.8
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.8e-42 175.3 232 46.6
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.8e-41 173.3 183 49.2
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 5.8e-40 168.3 196 48.0
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 5.8e-40 168.3 196 48.0
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 5.8e-40 168.3 196 48.0
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 5.8e-40 168.3 120 69.2
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.7e-39 166.8 192 50.0
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.4e-38 163.7 115 67.0
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.6e-37 160.2 194 46.4
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.6e-37 158.7 134 54.5
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.3e-36 157.1 134 59.0
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.8e-36 156.8 195 48.7
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.5e-35 153.7 130 57.7
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 7.4e-35 151.4 178 48.3
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 9.6e-35 151.0 174 48.3
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 2.8e-34 149.4 110 62.7
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 6.9e-33 144.8 190 46.3
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.4e-30 137.1 126 57.1
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.2e-29 134.0 192 44.3
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 7.9e-29 131.3 197 40.1
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 6.7e-28 128.3 94 64.9
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 1.1e-27 127.5 83 71.1
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.9e-27 126.7 179 40.2
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.4e-25 120.6 191 42.4
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.3e-23 114.0 92 54.3
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.3e-23 114.0 100 52.0
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.3e-23 114.0 181 40.3
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 4.6e-21 105.5 129 51.9
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.9e-19 100.1 110 54.5
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 4.3e-19 99.0 66 71.2
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 5.3e-17 92.0 122 40.2
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 9.0e-17 91.3 102 55.9
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 9.4e-14 81.3 111 40.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.1e-13 80.1 180 31.7
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 7.9e-13 78.2 101 47.5
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.3e-12 76.6 98 51.0
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 2.5e-11 73.2 130 31.5
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 2.5e-06 56.6 45 57.8
arahy.Tifrunner.gnm1.ann1.GB8LCX Arachis hypogaea HOM05D006081 ORTHO05D007628 5.5e-06 55.5 46 65.2
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 9.4e-06 54.7 39 71.8


User provided reference genes

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