Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 6.0e-33 144.4 131 100.0
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 1.1e-26 123.6 131 87.0
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 4.6e-25 118.2 131 87.8
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 2.8e-22 109.0 131 87.0
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 9.0e-21 104.0 131 85.5
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 1.2e-17 93.6 132 69.7
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 1.6e-17 93.2 132 83.3
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 2.7e-17 92.4 124 48.4
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 2.7e-17 92.4 132 81.8
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 1.8e-16 89.7 117 87.2
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 3.0e-16 89.0 125 80.0
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.7e-16 87.8 131 67.2
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.7e-16 87.8 131 67.2
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 7.4e-15 84.3 132 70.5
arahy.Tifrunner.gnm1.ann1.XR1IK3 Arachis hypogaea HOM05D006719 ORTHO05D007063 2.1e-14 82.8 127 78.0
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 2.8e-14 82.4 127 78.0
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.8e-14 82.4 105 80.0
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 3.7e-14 82.0 131 71.8
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 3.7e-14 82.0 131 71.8
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 4.1e-13 78.6 120 75.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 5.3e-13 78.2 131 70.2
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.2e-12 77.0 131 74.0
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 2.6e-12 75.9 131 64.9
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 2.6e-12 75.9 122 77.9
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 4.5e-12 75.1 134 64.9
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 4.5e-12 75.1 131 69.5
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 4.5e-12 75.1 131 64.1
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.5e-12 75.1 130 69.2
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 7.6e-12 74.3 131 68.7
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 7.6e-12 74.3 110 70.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 7.6e-12 74.3 132 72.0
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.0e-11 73.9 124 72.6
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.0e-11 73.9 131 69.5
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.0e-11 73.9 135 73.3
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.3e-11 73.6 124 72.6
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.3e-11 73.6 129 68.2
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.7e-11 73.2 102 79.4
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.2e-11 72.8 107 81.3
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 2.2e-11 72.8 131 71.8
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.2e-11 72.8 127 70.1
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 6.5e-11 71.2 131 71.0
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 6.5e-11 71.2 134 62.7
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 8.4e-11 70.9 131 68.7
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 3.2e-10 68.9 130 68.5
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 4.2e-10 68.6 131 71.8
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 4.2e-10 68.6 129 71.3
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 5.5e-10 68.2 111 74.8
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 2.1e-09 66.2 131 67.2
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 2.1e-09 66.2 126 61.9
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.1e-09 66.2 131 70.2
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.7e-09 65.9 134 41.0
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 2.7e-09 65.9 131 36.6
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 2.7e-09 65.9 99 79.8
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 3.5e-09 65.5 131 67.2
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 3.5e-09 65.5 131 67.2
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 7.9e-09 64.3 128 57.8
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 7.9e-09 64.3 110 75.5
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.8e-08 63.2 131 67.2
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 2.3e-08 62.8 117 71.8
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 2.3e-08 62.8 117 75.2
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 8.7e-08 60.8 131 67.9
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 8.7e-08 60.8 126 67.5
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 8.7e-08 60.8 118 58.5
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 1.1e-07 60.5 131 57.3
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 1.1e-07 60.5 114 75.4
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 1.5e-07 60.1 95 70.5
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.5e-07 60.1 131 35.9
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 3.3e-07 58.9 131 58.0
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 4.3e-07 58.5 36 77.8
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.7e-07 58.2 96 71.9
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 7.4e-07 57.8 131 66.4
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 7.4e-07 57.8 131 66.4
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 9.7e-07 57.4 96 68.8
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.3e-06 57.0 128 71.1
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.2e-06 56.2 139 34.5
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 2.2e-06 56.2 126 65.1
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 4.8e-06 55.1 106 74.5
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 6.3e-06 54.7 128 67.2
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 8.2e-06 54.3 131 67.2
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 8.2e-06 54.3 105 70.5


User provided reference genes

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