Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-96 355.9 175 100.0
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-69 265.4 136 88.2
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-69 265.4 136 88.2
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 1.7e-67 259.6 129 90.7
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-67 258.8 136 86.8
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-67 257.7 129 90.7
Ca_16771_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-60 236.5 134 81.3
Ca_22478_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.7e-54 215.3 120 82.5
Ca_31096_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.3e-54 214.5 111 87.4
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-53 212.2 108 89.8
Ca_28370_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.1e-53 210.7 111 85.6
Ca_31217_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-50 203.8 111 83.8
Ca_05231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.5e-50 202.6 110 84.5
Ca_10806_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.1e-49 198.0 99 90.9
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.7e-46 188.7 171 56.1
Ca_03929_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-45 186.0 86 96.5
Ca_05534_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.2e-42 175.3 89 91.0
Ca_15168_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-42 174.1 97 79.4
Ca_24276_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-40 169.1 99 77.8
Ca_12256_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-39 166.4 91 86.8
Ca_20984_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-35 152.9 84 79.8
Ca_10492_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-34 150.2 81 82.7
Ca_07256_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.3e-34 149.1 82 82.9
Ca_00657_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-33 146.7 74 89.2
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 2.1e-33 146.4 88 75.0
Ca_03568_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-32 142.9 81 80.2
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-29 134.0 133 48.9
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.4e-29 132.9 133 48.9
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-29 132.9 133 48.1
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.4e-29 131.7 133 48.1
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.0e-29 131.3 133 48.1
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.2e-29 131.0 133 48.1
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.5e-28 129.0 133 48.1
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.6e-28 128.6 124 48.4
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.6e-28 128.6 133 47.4
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-27 125.9 133 48.1
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.6e-27 124.8 133 45.1
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-26 123.2 133 46.6
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.6e-26 121.7 127 46.5
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-25 118.6 133 45.1
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.1e-24 115.9 115 49.6
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.2e-24 115.2 133 43.6
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-24 114.8 133 43.6
Ca_05232_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 4.4e-23 112.1 57 87.7
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-21 107.1 103 51.5
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.9e-21 106.7 100 53.0
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-21 106.7 130 42.3
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 3.2e-21 105.9 129 41.9
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.2e-21 104.4 90 54.4
Ca_19837_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.0e-20 101.7 87 57.5
Ca_02100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-19 99.8 97 50.5
Ca_13742_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-19 99.4 101 44.6
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.9e-19 99.0 115 42.6
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.3e-18 95.9 129 38.8
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.3e-18 94.7 129 39.5
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.5e-18 94.4 127 40.9
Ca_01588_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-18 94.4 96 49.0
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 2.1e-17 93.2 78 53.8
Ca_14807_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-17 92.8 76 59.2
Ca_03687_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.6e-17 92.4 102 44.1
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.7e-17 92.0 129 38.0
Ca_30958_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-17 92.0 89 46.1
Ca_23365_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 1.1e-16 90.9 53 79.2
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-16 90.5 131 38.9
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-16 89.7 100 42.0
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.3e-16 89.7 128 39.1
Ca_03914_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.9e-15 84.3 141 31.9
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-14 84.0 77 54.5
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 1.7e-14 83.6 121 35.5
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.9e-14 82.0 143 34.3
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.4e-14 81.3 139 36.7
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-13 80.5 139 36.0
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-13 80.5 129 38.0
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.4e-13 79.7 143 34.3
Ca_22382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.4e-13 79.7 116 37.1
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.4e-13 78.6 143 35.7
Ca_06560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.1e-13 78.2 123 36.6
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-12 77.4 143 34.3
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 3.5e-12 75.9 116 35.3
Ca_01382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.0e-11 74.3 126 36.5
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.3e-11 73.9 126 35.7
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.3e-11 73.2 126 33.3
Ca_14648_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-11 72.8 76 43.4
Ca_14516_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.9e-11 72.4 101 39.6
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-11 72.0 127 32.3
Lj1g0013414 Lotus japonicus HOM05D004283 ORTHO05D002183 1.1e-10 70.9 118 33.1
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.9e-10 70.1 126 30.2
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 1.9e-10 70.1 124 29.8
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.5e-10 69.7 134 34.3
Ca_15979_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.6e-10 68.6 116 35.3
Ca_20173_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.3e-10 68.2 76 47.4
Ca_25324_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.3e-10 68.2 131 32.1
Ca_01641_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.6e-10 67.8 87 40.2
Ca_18100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.6e-10 67.8 91 37.4
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-10 67.8 131 29.0
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-09 67.4 130 28.5
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-09 66.2 127 29.9
Ca_14656_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.1e-09 64.7 111 36.0
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 8.1e-09 64.7 131 28.2
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-08 63.2 126 27.8
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-08 62.4 75 44.0
Ca_23376_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-08 62.4 98 32.7
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-08 61.6 126 28.6
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-08 61.6 126 27.8
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-08 61.6 130 26.2
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-08 61.6 125 27.2
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-08 61.6 126 26.2
Ca_14675_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.9e-08 61.2 62 41.9
Ca_19142_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.9e-08 61.2 99 33.3
TPR.G22232 Trifolium pratense HOM05D014852 ORTHO05D023173 8.9e-08 61.2 65 43.1
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-07 60.8 126 28.6
Ca_13090_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-07 60.8 64 43.8
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 1.5e-07 60.5 126 27.0
TPR.G5752 Trifolium pratense HOM05D014852 ORTHO05D023173 1.5e-07 60.5 59 40.7
Ca_12206_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-07 60.1 115 33.0
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 2.6e-07 59.7 82 39.0
Ca_04284_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.6e-07 59.7 90 35.6
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 4.4e-07 58.9 60 46.7
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-07 58.9 127 26.0
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.8e-07 58.5 82 36.6
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 5.8e-07 58.5 82 36.6
Ca_25560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.8e-07 58.5 101 36.6
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-07 58.5 128 26.6
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.6e-07 58.2 82 36.6
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.6e-07 58.2 123 29.3
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 9.9e-07 57.8 129 29.5
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 9.9e-07 57.8 129 29.5
Ca_14601_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.9e-07 57.8 60 46.7
Ca_01819_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.7e-06 57.0 98 37.8
Ca_18716_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.7e-06 57.0 97 36.1
Ca_12966_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.2e-06 56.6 86 39.5
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-06 56.2 127 27.6
Ca_07923_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.8e-06 55.8 104 34.6
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-06 55.8 127 25.2
Ca_05310_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.4e-06 55.1 76 38.2
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.4e-06 54.7 82 35.4


User provided reference genes

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