Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 4.4e-49 197.6 97 100.0
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 4.6e-38 161.0 89 84.3
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 1.5e-36 156.0 88 83.0
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 4.3e-36 154.5 90 84.4
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 5.1e-29 131.0 85 74.1
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 2.5e-28 128.6 82 74.4
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 2.5e-28 128.6 83 71.1
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 8.1e-27 123.6 80 75.0
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 1.1e-26 123.2 95 63.2
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 3.1e-26 121.7 79 70.9
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 6.9e-26 120.6 93 61.3
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 1.2e-25 119.8 82 68.3
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 1.2e-25 119.8 80 68.8
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 1.5e-25 119.4 79 69.6
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 2.0e-25 119.0 80 70.0
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 3.4e-25 118.2 99 58.6
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 3.4e-25 118.2 78 67.9
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 4.5e-25 117.9 78 67.9
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 5.8e-25 117.5 78 67.9
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 5.8e-25 117.5 78 67.9
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 7.6e-25 117.1 78 74.4
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 9.9e-25 116.7 77 70.1
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 1.7e-24 115.9 78 66.7
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 1.7e-24 115.9 79 65.8
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.7e-24 115.9 78 64.1
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.7e-24 115.9 78 64.1
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 2.2e-24 115.5 95 58.9
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 2.2e-24 115.5 82 58.5
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 4.9e-24 114.4 79 64.6
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 4.9e-24 114.4 80 67.5
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.4e-24 114.0 92 59.8
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 8.4e-24 113.6 72 73.6
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 1.1e-23 113.2 80 63.8
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 1.9e-23 112.5 78 64.1
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 1.9e-23 112.5 78 65.4
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 2.4e-23 112.1 95 57.9
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 3.2e-23 111.7 89 60.7
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 4.2e-23 111.3 82 54.9
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 7.1e-23 110.5 83 60.2
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 7.1e-23 110.5 78 62.8
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 7.1e-23 110.5 78 62.8
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 9.3e-23 110.2 81 63.0
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 9.3e-23 110.2 78 62.8
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 1.2e-22 109.8 78 62.8
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 1.2e-22 109.8 92 57.6
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 1.6e-22 109.4 81 63.0
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 2.1e-22 109.0 78 62.8
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 2.1e-22 109.0 78 65.4
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 4.6e-22 107.8 78 61.5
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 4.6e-22 107.8 78 61.5
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 4.6e-22 107.8 78 61.5
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 6.0e-22 107.5 77 66.2
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 6.0e-22 107.5 95 53.7
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 1.0e-21 106.7 88 59.1
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 1.3e-21 106.3 80 62.5
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 2.3e-21 105.5 77 63.6
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 3.9e-21 104.8 84 60.7
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 3.9e-21 104.8 81 59.3
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 5.1e-21 104.4 80 60.0
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.7e-21 104.0 92 57.6
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 6.7e-21 104.0 78 61.5
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 1.9e-20 102.4 83 60.2
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 1.1e-18 96.7 79 60.8
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 1.1e-18 96.7 83 54.2
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 1.4e-18 96.3 80 61.2
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 1.8e-18 95.9 71 64.8
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 2.4e-18 95.5 87 54.0
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 3.1e-18 95.1 88 51.1
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 2.0e-17 92.4 85 52.9
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 5.8e-17 90.9 83 55.4
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 1.0e-16 90.1 83 55.4
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 6.0e-14 80.9 94 42.6
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 2.8e-11 72.0 48 62.5
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 4.8e-11 71.2 84 44.0
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 5.3e-10 67.8 49 61.2
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 9.0e-10 67.0 76 42.1
SEGI_25488 Sequoiadendron giganteum HOM05D007940 ORTHO05D010046 4.5e-09 64.7 71 40.8


User provided reference genes

Program Settings