Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.7e-126 456.1 232 100.0
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.3e-110 403.3 229 89.1
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 3.5e-108 395.2 225 88.0
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 5.9e-108 394.4 229 87.8
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 5.0e-107 391.3 227 84.6
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 2.7e-105 385.6 227 82.4
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 9.8e-103 377.1 229 80.8
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.7e-102 376.3 227 81.5
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 3.7e-94 348.6 225 75.6
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 3.7e-94 348.6 227 74.9
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 8.3e-94 347.4 229 74.7
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 2.4e-93 345.9 227 73.6
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.7e-92 342.4 225 74.7
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.1e-90 337.0 225 72.9
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.5e-90 336.7 225 72.0
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 2.5e-90 335.9 214 75.2
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 2.5e-90 335.9 225 72.4
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 4.3e-90 335.1 225 70.2
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 9.5e-90 334.0 225 72.9
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.2e-89 333.6 225 72.4
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.6e-89 333.2 225 69.8
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 6.1e-89 331.3 224 71.0
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 6.1e-89 331.3 225 70.7
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 8.0e-89 330.9 225 73.3
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 1.4e-88 330.1 225 69.3
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 3.0e-88 328.9 225 69.3
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 4.0e-88 328.6 225 69.3
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 6.8e-88 327.8 225 69.3
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 8.9e-88 327.4 242 68.6
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.5e-87 326.6 225 70.2
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 1.5e-87 326.6 226 70.4
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 4.4e-87 325.1 227 68.3
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 7.5e-87 324.3 213 73.7
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 7.5e-87 324.3 225 69.3
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.3e-86 323.6 227 69.2
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 2.2e-86 322.8 225 68.4
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 2.9e-86 322.4 225 69.8
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 4.9e-86 321.6 225 68.4
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 6.4e-86 321.2 222 70.7
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 1.4e-85 320.1 227 71.8
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 3.2e-85 318.9 225 70.7
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 4.1e-85 318.5 226 68.1
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 5.4e-85 318.2 229 68.1
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 1.2e-84 317.0 223 68.2
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 2.0e-84 316.2 225 68.4
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 7.8e-84 314.3 226 71.2
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 1.0e-83 313.9 223 67.7
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 1.7e-83 313.2 225 66.2
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 3.0e-83 312.4 232 65.9
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 3.0e-83 312.4 221 70.1
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 3.9e-83 312.0 221 68.3
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 5.0e-83 311.6 226 66.8
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 1.5e-82 310.1 229 67.2
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.3e-82 308.5 226 66.4
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 5.6e-82 308.1 226 65.9
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 5.6e-82 308.1 226 69.5
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 9.5e-82 307.4 225 67.6
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.2e-81 307.0 225 64.4
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 2.1e-81 306.2 225 67.6
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 2.8e-81 305.8 225 66.2
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.6e-81 305.4 226 66.4
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 6.2e-81 304.7 226 65.9
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 1.8e-80 303.1 230 65.7
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 3.1e-80 302.4 212 68.9
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 8.9e-80 300.8 226 65.5
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 7.5e-79 297.7 226 65.0
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 9.8e-79 297.4 227 64.3
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 9.8e-79 297.4 226 65.0
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.7e-78 296.6 226 64.6
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 3.7e-78 295.4 226 64.2
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 1.4e-77 293.5 226 63.3
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.9e-77 293.1 226 63.7
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.9e-77 293.1 226 63.7
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 2.4e-77 292.7 226 63.3
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 4.1e-77 292.0 226 63.3
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 4.6e-76 288.5 226 61.9
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 4.6e-76 288.5 223 62.3
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.7e-75 286.6 233 61.8
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 5.6e-74 281.6 227 62.1
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 5.6e-74 281.6 214 62.1
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 9.5e-74 280.8 226 61.5
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 4.7e-73 278.5 227 61.2
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 4.7e-73 278.5 229 62.0
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 4.7e-73 278.5 227 60.8
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.1e-72 277.3 233 59.7
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.4e-72 276.9 213 63.8
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 1.2e-71 273.9 213 63.8
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 1.7e-70 270.0 229 60.3
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 3.7e-70 268.9 214 61.7
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 8.3e-70 267.7 221 59.7
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.4e-69 266.9 207 60.9
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 3.2e-69 265.8 226 58.0
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.2e-63 247.3 151 84.1
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 3.8e-62 242.3 251 49.8
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.4e-61 239.6 227 54.2
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 3.2e-61 239.2 151 78.1
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.6e-57 226.9 206 58.7
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 3.2e-53 212.6 221 50.2
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 5.4e-53 211.8 147 68.7
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 3.1e-48 196.1 118 85.6
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 5.4e-45 185.3 211 42.2
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 7.9e-44 181.4 224 42.9
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 9.6e-42 174.5 230 40.9
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.7e-41 172.6 225 46.7
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 8.4e-38 161.4 128 59.4
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.4e-37 160.6 151 55.0
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 7.1e-37 158.3 218 36.2
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 1.2e-36 157.5 217 36.9
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 1.3e-33 147.5 217 35.9
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.0e-31 140.2 89 75.3
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 4.5e-31 139.0 109 62.4
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 1.1e-26 124.4 158 44.3
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.7e-20 103.2 83 59.0
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 7.2e-13 78.6 88 51.1
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 7.2e-13 78.6 88 51.1
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 9.1e-08 61.6 43 62.8
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 5.9e-07 58.9 89 41.6


User provided reference genes

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