Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 7.9e-103 377.1 188 100.0
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 6.8e-30 134.8 312 38.1
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 1.0e-25 120.9 302 36.8
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 2.3e-25 119.8 316 35.4
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 6.6e-25 118.2 348 33.3
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 1.2e-21 107.5 98 64.3
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 2.0e-21 106.7 100 65.0
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 6.6e-17 91.7 334 29.6
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 3.6e-15 85.9 108 46.3
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 8.1e-15 84.7 91 59.3
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 1.2e-13 80.9 109 45.0
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 1.5e-13 80.5 98 52.0
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 2.6e-13 79.7 87 56.3
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 5.8e-13 78.6 45 86.7
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 5.8e-13 78.6 45 86.7
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 5.8e-13 78.6 98 45.9
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 5.8e-13 78.6 98 45.9
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 7.6e-13 78.2 86 52.3
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 7.6e-13 78.2 86 52.3
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 7.6e-13 78.2 86 52.3
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 7.6e-13 78.2 98 50.0
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 9.9e-13 77.8 95 49.5
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.7e-12 77.0 86 46.5
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 4.9e-12 75.5 111 48.6
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 2.4e-11 73.2 110 41.8
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 2.1e-10 70.1 85 43.5
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 2.7e-10 69.7 88 45.5
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 4.6e-10 68.9 87 51.7
Lj3g0025864 Lotus japonicus HOM05D008268 ORTHO05D010144 7.9e-10 68.2 82 48.8
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 8.7e-09 64.7 98 41.8
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.1e-08 64.3 162 35.2
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 1.5e-08 63.9 84 53.6
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 9.6e-08 61.2 88 48.9
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 2.1e-07 60.1 92 43.5
Eucgr.F01064 Eucalyptus grandis HOM05D008268 ORTHO05D010144 2.1e-07 60.1 113 41.6
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 2.8e-07 59.7 93 43.0
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 6.2e-07 58.5 101 42.6
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 1.4e-06 57.4 257 29.6
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 1.4e-06 57.4 87 42.5
PGSC0003DMG400019280 Solanum tuberosum HOM05D015394 ORTHO05D017774 1.8e-06 57.0 129 36.4
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 3.1e-06 56.2 144 35.4
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 9.0e-06 54.7 87 41.4


User provided reference genes

Program Settings