Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01755_v3 Cicer arietinum L. HOM05D001540 ORTHO05D001520 8.9e-60 233.4 118 100.0
Ca_01761_v3 Cicer arietinum L. HOM05D001540 ORTHO05D001520 8.9e-60 233.4 118 100.0
Medtr2g082770 Medicago truncatula HOM05D001540 ORTHO05D001520 5.6e-38 161.0 119 73.1
TPR.G36798 Trifolium pratense HOM05D001540 ORTHO05D001520 2.1e-37 159.1 120 76.7
Psat5g249880 Pisum sativum HOM05D001540 ORTHO05D001520 2.3e-36 155.6 119 72.3
Glyma.12G214600 Glycine max HOM05D001540 ORTHO05D001520 1.1e-28 130.2 109 61.5
Glyma.13G287000 Glycine max HOM05D001540 ORTHO05D001520 2.6e-27 125.6 110 60.9
arahy.Tifrunner.gnm1.ann1.C2FWCT Arachis hypogaea HOM05D001540 ORTHO05D001520 1.6e-24 116.3 108 58.3
arahy.Tifrunner.gnm1.ann1.U6HGF1 Arachis hypogaea HOM05D001540 ORTHO05D001520 6.0e-24 114.4 108 57.4
Lalb_Chr14g0366091 Lupinus albus HOM05D001540 ORTHO05D001520 6.6e-23 110.9 118 55.1
Phvul.005G091300 Phaseolus vulgaris HOM05D001540 ORTHO05D001520 6.2e-21 104.4 99 59.6
Lalb_Chr19g0134731 Lupinus albus HOM05D001540 ORTHO05D001520 4.9e-18 94.7 119 50.4
Lalb_Chr22g0357051 Lupinus albus HOM05D001540 ORTHO05D001520 4.9e-18 94.7 97 56.7
VMungo1080G1382 Vigna mungo HOM05D001540 ORTHO05D001520 7.9e-16 87.4 86 59.3
VMungo1127G1627 Vigna mungo HOM05D001540 ORTHO05D001520 6.7e-15 84.3 99 48.5
Lj3g0015626 Lotus japonicus HOM05D001540 ORTHO05D001520 2.1e-13 79.3 66 63.6
Glyma.12G136000 Glycine max HOM05D001540 ORTHO05D001520 9.0e-12 73.9 101 48.5
Phvul.011G140900 Phaseolus vulgaris HOM05D001540 ORTHO05D001520 2.9e-10 68.9 119 42.0
Sabra16G0283400 Salix brachista HOM05D001540 ORTHO05D001520 2.9e-10 68.9 121 42.1
Potri.001G417000 Populus trichocarpa HOM05D001540 ORTHO05D001520 1.1e-09 67.0 119 42.9
vmacro09748 Vaccinium macrocarpon HOM05D001540 ORTHO05D001520 1.1e-09 67.0 121 44.6
Actinidia35314 Actinidia chinensis HOM05D001540 ORTHO05D001520 2.1e-08 62.8 120 41.7
Prupe.4G201900 Prunus persica HOM05D001540 ORTHO05D001520 4.6e-08 61.6 106 45.3
Duzib268G1066 Durio zibethinus HOM05D001540 ORTHO05D001520 1.3e-07 60.1 119 40.3
CSS0010177 Camellia sinensis var. sinensis HOM05D001540 ORTHO05D001520 3.9e-07 58.5 114 41.2
Ciclev10007389m.g Citrus clementina HOM05D001540 ORTHO05D001520 5.1e-07 58.2 114 43.0
RhsimUnG0253300 Rhododendron simsii HOM05D001540 ORTHO05D001520 1.5e-06 56.6 118 39.8
CSS0026650 Camellia sinensis var. sinensis HOM05D001540 ORTHO05D001520 2.5e-06 55.8 114 40.4
COL.COLO4_09563 Corchorus olitorius HOM05D001540 ORTHO05D001520 2.5e-06 55.8 119 41.2


User provided reference genes

Program Settings