Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.2e-189 666.4 343 100.0
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.2e-189 666.4 343 100.0
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 5.4e-150 534.6 342 81.6
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 3.9e-148 528.5 343 80.2
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 6.8e-145 517.7 343 80.2
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 7.1e-142 507.7 347 79.3
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 9.2e-142 507.3 343 78.1
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 1.1e-139 500.4 343 77.0
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.1e-137 493.8 343 76.1
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 3.4e-136 488.8 344 73.0
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.9e-135 485.7 343 73.8
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 5.1e-116 421.8 346 65.6
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 6.7e-116 421.4 346 65.6
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 9.0e-113 411.0 282 70.9
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.0e-111 407.5 332 61.4
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 4.9e-111 405.2 348 62.9
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 6.5e-111 404.8 331 61.0
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.1e-110 404.1 314 66.6
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.9e-110 403.3 343 61.8
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 4.2e-110 402.1 345 62.6
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 9.3e-110 401.0 305 68.2
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 1.2e-109 400.6 351 61.5
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 7.9e-109 397.9 343 60.3
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 1.3e-108 397.1 345 60.0
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 1.8e-108 396.7 351 61.3
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.3e-108 396.4 346 62.1
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 3.9e-108 395.6 347 62.0
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 2.5e-107 392.9 343 59.8
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 4.3e-107 392.1 346 59.0
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.2e-106 389.8 345 59.4
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 4.8e-106 388.7 343 61.2
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 6.3e-106 388.3 346 60.7
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 8.2e-106 387.9 345 58.6
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 3.1e-105 386.0 347 60.5
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.2e-104 384.0 291 66.3
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 2.0e-104 383.3 281 66.2
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 2.0e-104 383.3 347 58.8
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 4.5e-104 382.1 350 59.4
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 4.5e-104 382.1 343 60.3
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 1.7e-103 380.2 344 58.1
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 2.2e-103 379.8 338 59.8
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 3.8e-103 379.0 323 59.1
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 2.5e-102 376.3 333 59.5
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 3.2e-102 375.9 327 61.5
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 9.4e-102 374.4 337 60.2
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 9.4e-102 374.4 344 58.4
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.4e-100 370.5 287 64.8
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 1.4e-100 370.5 344 60.2
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 1.4e-100 370.5 321 62.6
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.8e-100 370.2 320 61.6
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 3.0e-100 369.4 339 59.9
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 5.1e-100 368.6 329 60.2
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 6.7e-100 368.2 322 58.4
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 8.8e-100 367.9 344 57.8
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.0e-99 366.7 343 56.6
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 3.3e-99 365.9 281 64.8
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 4.3e-99 365.5 348 57.2
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 5.7e-99 365.2 327 59.6
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 8.2e-98 361.3 289 63.7
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 4.5e-96 355.5 350 56.6
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.3e-95 354.0 353 56.1
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.4e-94 350.5 336 56.2
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 2.5e-94 349.7 273 66.3
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.6e-93 347.1 307 58.0
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 3.0e-92 342.8 341 55.4
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 6.7e-92 341.7 349 54.4
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 9.7e-91 337.8 278 62.2
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 1.3e-90 337.4 347 54.5
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.7e-90 335.9 308 58.1
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 8.2e-90 334.7 355 54.6
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 3.1e-89 332.8 351 54.1
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 5.3e-89 332.0 355 53.8
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 5.9e-88 328.6 357 55.5
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 7.7e-88 328.2 355 54.4
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.0e-87 327.8 348 54.9
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.0e-87 327.8 282 58.5
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 1.3e-87 327.4 355 54.1
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 1.2e-85 320.9 352 54.5
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 3.6e-85 319.3 353 55.0
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 6.1e-85 318.5 304 56.2
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 8.0e-85 318.2 356 53.4
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 8.0e-85 318.2 356 53.4
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 3.0e-84 316.2 313 56.5
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 5.2e-84 315.5 351 53.6
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 9.7e-83 311.2 354 52.3
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 7.0e-81 305.1 354 53.7
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 9.7e-75 284.6 278 55.4
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 8.5e-71 271.6 183 73.8
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 3.2e-70 269.6 298 46.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.6e-69 267.3 204 66.2
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.5e-62 244.2 298 43.6
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 1.8e-60 237.3 312 43.9
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 1.9e-49 200.7 196 57.1
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 7.0e-49 198.7 133 71.4
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 8.6e-47 191.8 265 39.6
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 9.8e-43 178.3 120 67.5
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 2.7e-32 143.7 275 34.5
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 1.3e-31 141.4 264 32.6
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 5.6e-30 136.0 266 38.7
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 2.1e-29 134.0 134 53.0
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 6.8e-28 129.0 114 57.9
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 2.0e-27 127.5 202 43.1
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.9e-22 110.9 107 52.3
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 5.3e-20 102.8 268 27.6
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 3.1e-12 77.0 101 37.6
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 6.7e-07 59.3 331 23.0


User provided reference genes

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