Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 4.9e-106 387.9 204 100.0
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 2.4e-81 305.8 222 79.3
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 6.0e-80 301.2 220 78.6
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 8.6e-79 297.4 211 81.0
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.7e-71 273.1 222 71.6
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 6.6e-71 271.2 216 71.3
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 8.7e-71 270.8 215 71.2
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 2.1e-69 266.2 214 70.1
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 1.1e-68 263.8 214 71.0
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 2.9e-66 255.8 212 68.9
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.9e-65 253.1 182 76.9
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 3.2e-65 252.3 168 81.5
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 9.3e-65 250.8 182 76.4
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 9.3e-65 250.8 208 67.8
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 2.7e-64 249.2 218 70.2
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 7.9e-64 247.7 209 70.8
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 1.7e-63 246.5 226 65.9
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 2.3e-63 246.1 242 64.0
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 3.0e-63 245.7 214 68.2
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 1.5e-62 243.4 211 66.8
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.5e-62 242.7 214 67.3
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 4.3e-62 241.9 214 67.3
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 4.3e-62 241.9 226 65.5
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 1.6e-61 240.0 192 70.8
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 6.2e-61 238.0 222 66.2
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 8.1e-61 237.7 227 65.2
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.8e-60 236.5 224 66.1
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 2.4e-60 236.1 189 72.5
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.4e-60 236.1 209 67.0
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 4.0e-60 235.3 209 67.0
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 6.9e-60 234.6 197 70.6
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.2e-59 233.8 195 70.3
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.2e-59 233.8 195 70.3
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 2.0e-59 233.0 197 70.6
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 3.4e-59 232.3 231 62.8
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 4.5e-59 231.9 200 69.0
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 4.9e-58 228.4 232 61.6
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 4.9e-58 228.4 185 70.3
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 6.4e-58 228.0 228 62.7
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 8.4e-58 227.6 204 64.2
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 2.4e-57 226.1 168 75.0
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 4.2e-57 225.3 216 63.9
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 5.5e-57 224.9 221 63.8
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 1.2e-56 223.8 169 76.3
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 1.6e-56 223.4 181 72.4
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 1.6e-56 223.4 204 65.7
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 2.1e-56 223.0 181 72.4
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 2.1e-56 223.0 193 68.4
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 2.7e-56 222.6 181 72.4
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 2.7e-56 222.6 221 63.8
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 7.9e-56 221.1 212 65.1
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 7.9e-56 221.1 216 63.9
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 7.9e-56 221.1 216 63.9
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 7.9e-56 221.1 216 63.9
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 7.9e-56 221.1 197 68.0
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 1.0e-55 220.7 205 66.3
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 1.0e-55 220.7 199 66.3
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 1.8e-55 219.9 184 70.1
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 1.8e-55 219.9 217 61.8
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 2.3e-55 219.5 197 65.0
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.3e-55 219.5 190 67.9
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 2.3e-55 219.5 207 60.4
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 3.0e-55 219.2 204 65.2
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 3.9e-55 218.8 212 65.1
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 3.9e-55 218.8 180 70.6
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 3.9e-55 218.8 184 69.0
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 5.1e-55 218.4 206 64.1
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 8.7e-55 217.6 211 64.5
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 8.7e-55 217.6 221 61.5
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 8.7e-55 217.6 221 61.5
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 1.1e-54 217.2 162 77.2
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.1e-54 217.2 220 62.3
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 1.1e-54 217.2 207 64.3
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 1.9e-54 216.5 150 82.0
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 2.5e-54 216.1 182 71.4
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 2.5e-54 216.1 220 60.9
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 9.6e-54 214.2 163 73.0
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 3.7e-53 212.2 157 78.3
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 8.1e-53 211.1 174 68.4
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 6.9e-52 208.0 166 72.9
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 7.6e-51 204.5 148 77.7
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 6.5e-50 201.4 213 59.6
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 5.5e-49 198.4 169 69.8
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 7.1e-49 198.0 224 58.0
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 2.1e-48 196.4 179 65.9
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 1.3e-47 193.7 178 61.8
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 4.8e-45 185.3 210 57.1
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 6.9e-44 181.4 226 53.5
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 5.9e-43 178.3 124 78.2
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 3.0e-39 166.0 162 58.0
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 3.9e-39 165.6 147 63.3
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 6.7e-39 164.9 169 58.6
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 1.9e-38 163.3 170 56.5
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 1.6e-37 160.2 108 83.3
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 2.2e-37 159.8 119 73.1
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 5.1e-31 138.7 104 73.1
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 6.9e-28 128.3 82 85.4
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 4.5e-27 125.6 82 84.1
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 2.8e-21 106.3 142 49.3
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 4.1e-20 102.4 74 77.0
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 5.3e-20 102.1 89 61.8
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 2.6e-19 99.8 118 47.5
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 2.7e-16 89.7 58 82.8
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 8.0e-16 88.2 81 63.0
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 1.0e-15 87.8 104 53.8
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 3.8e-10 69.3 46 78.3
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.8e-10 69.3 46 78.3
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 1.5e-09 67.4 112 35.7
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 6.8e-07 58.5 107 37.4


User provided reference genes

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