Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 5.5e-98 361.7 299 100.0
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 3.1e-85 319.3 299 85.3
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 5.1e-80 302.0 299 76.9
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 5.1e-80 302.0 299 77.3
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 1.1e-79 300.8 299 83.3
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 2.6e-79 299.7 299 81.6
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 2.6e-76 289.7 301 80.7
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 2.2e-75 286.6 215 91.6
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 4.4e-71 272.3 300 71.3
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 1.3e-70 270.8 299 75.3
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 2.2e-70 270.0 299 81.6
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 2.4e-69 266.5 300 67.7
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 3.1e-69 266.2 298 56.7
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 2.0e-68 263.5 300 82.0
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 3.5e-68 262.7 300 85.0
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 1.5e-66 257.3 300 70.0
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 1.9e-66 256.9 302 78.1
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 5.5e-66 255.4 140 90.0
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 7.2e-66 255.0 300 62.7
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 1.2e-65 254.2 300 68.3
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 2.1e-65 253.4 298 67.1
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 3.6e-65 252.7 300 61.0
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 1.4e-64 250.8 299 70.6
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 5.2e-64 248.8 296 64.2
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 2.6e-63 246.5 298 67.4
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 8.2e-62 241.5 295 59.7
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 7.0e-61 238.4 297 57.2
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 1.6e-60 237.3 300 61.7
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 2.7e-60 236.5 301 55.8
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 2.7e-60 236.5 300 66.0
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 1.7e-59 233.8 298 59.7
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 2.2e-59 233.4 139 84.9
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 5.0e-59 232.3 298 64.8
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 2.5e-58 229.9 295 60.7
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 5.5e-58 228.8 140 82.9
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 5.5e-58 228.8 139 84.2
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 7.2e-58 228.4 297 54.5
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 7.2e-58 228.4 298 64.8
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 7.2e-58 228.4 297 65.3
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 9.4e-58 228.0 298 65.8
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 9.4e-58 228.0 298 57.4
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 1.2e-57 227.6 141 83.7
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.6e-57 227.3 298 65.4
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 2.7e-57 226.5 298 64.1
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 3.6e-57 226.1 301 63.8
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 3.6e-57 226.1 295 51.5
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 4.7e-57 225.7 298 61.1
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 4.7e-57 225.7 306 74.8
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 6.1e-57 225.3 299 68.9
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 6.1e-57 225.3 142 81.7
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 8.0e-57 224.9 298 64.4
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.4e-56 224.2 300 66.7
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.4e-56 224.2 300 66.7
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 3.0e-56 223.0 216 67.6
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 3.0e-56 223.0 295 60.7
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 4.0e-56 222.6 300 66.3
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 4.0e-56 222.6 298 53.7
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 5.2e-56 222.2 141 80.9
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 6.8e-56 221.9 142 81.0
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 6.8e-56 221.9 142 81.0
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 6.8e-56 221.9 142 81.0
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 8.8e-56 221.5 299 65.2
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 1.5e-55 220.7 139 80.6
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 2.0e-55 220.3 141 80.1
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 2.6e-55 219.9 141 80.9
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 3.4e-55 219.5 220 69.1
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 3.4e-55 219.5 139 80.6
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 4.4e-55 219.2 141 80.9
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 4.4e-55 219.2 137 82.5
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 7.5e-55 218.4 142 79.6
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 9.8e-55 218.0 141 80.1
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 9.8e-55 218.0 297 62.6
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 1.3e-54 217.6 297 48.8
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 1.3e-54 217.6 192 82.8
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 1.3e-54 217.6 311 61.1
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 2.2e-54 216.9 298 64.1
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 2.2e-54 216.9 139 79.9
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 2.8e-54 216.5 139 79.1
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 2.8e-54 216.5 191 71.7
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 3.7e-54 216.1 201 73.1
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 4.8e-54 215.7 141 80.1
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 6.3e-54 215.3 193 82.4
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 1.1e-53 214.5 143 79.0
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 1.1e-53 214.5 143 79.0
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 1.1e-53 214.5 137 79.6
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 1.4e-53 214.2 301 62.1
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 1.8e-53 213.8 142 78.9
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 1.8e-53 213.8 142 78.9
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 5.4e-53 212.2 297 51.9
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 7.0e-53 211.8 134 80.6
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 7.0e-53 211.8 139 77.7
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 1.2e-52 211.1 249 61.0
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 1.2e-52 211.1 200 72.0
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 1.2e-52 211.1 197 64.5
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 2.0e-52 210.3 296 65.5
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 4.5e-52 209.1 301 54.8
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 1.7e-51 207.2 131 80.2
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 2.9e-51 206.5 122 84.4
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 6.6e-51 205.3 302 51.0
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 6.6e-51 205.3 299 53.8
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 5.5e-50 202.2 296 55.4
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 7.2e-50 201.8 150 72.7
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 3.6e-49 199.5 132 75.0
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 5.2e-48 195.7 192 69.8
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 8.9e-48 194.9 189 70.4
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 2.6e-47 193.4 308 57.8
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 3.4e-47 193.0 182 73.1
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 9.8e-47 191.4 208 65.9
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 4.9e-46 189.1 123 75.6
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 3.5e-44 183.0 101 90.1
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 3.3e-42 176.4 105 84.8
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 6.8e-40 168.7 193 62.2
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.5e-39 167.5 311 48.9
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 2.3e-27 127.1 117 56.4
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 5.2e-24 115.9 70 82.9
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 1.2e-23 114.8 77 75.3
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.4e-23 112.8 70 80.0
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 1.4e-21 107.8 120 45.0
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 7.1e-21 105.5 115 73.9
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 3.6e-17 93.2 59 76.3
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 3.2e-13 80.1 222 40.1
FAN16G3226 Fragaria x ananassa HOM05D006334 ORTHO05D008320 3.2e-13 80.1 200 52.5


User provided reference genes

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