Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01737_v3 Cicer arietinum L. HOM05D000332 ORTHO05D000268 1.6e-55 219.5 142 100.0
Glyma.12G213200 Glycine max HOM05D000332 ORTHO05D000268 4.5e-26 121.7 82 72.0
Lalb_Chr14g0366221 Lupinus albus HOM05D000332 ORTHO05D000268 5.5e-24 114.8 82 68.3
VMungo1080G0827 Vigna mungo HOM05D000332 ORTHO05D000268 2.1e-23 112.8 82 64.6
Lj3g0011399 Lotus japonicus HOM05D000332 ORTHO05D000268 4.7e-23 111.7 82 68.3
Glyma.12G134800 Glycine max HOM05D000332 ORTHO05D000268 4.0e-22 108.6 66 72.7
Ca_18857_v3 Cicer arietinum L. HOM05D000332 ORTHO05D000268 8.8e-22 107.5 66 71.2
Psat5g252120 Pisum sativum HOM05D000332 ORTHO05D000268 1.5e-21 106.7 248 44.8
Lj3g0007688 Lotus japonicus HOM05D000332 ORTHO05D000268 2.0e-21 106.3 66 74.2
Glyma.06G270000 Glycine max HOM05D000332 ORTHO05D000268 2.6e-21 105.9 66 72.7
arahy.Tifrunner.gnm1.ann1.HZU6G9 Arachis hypogaea HOM05D000332 ORTHO05D000268 4.4e-21 105.1 66 71.2
arahy.Tifrunner.gnm1.ann1.SQCB4H Arachis hypogaea HOM05D000332 ORTHO05D000268 4.4e-21 105.1 66 71.2
Medtr2g083250 Medicago truncatula HOM05D000332 ORTHO05D000268 9.8e-21 104.0 57 86.0
Phvul.011G139300 Phaseolus vulgaris HOM05D000332 ORTHO05D000268 1.7e-20 103.2 66 68.2
Psat7g162560 Pisum sativum HOM05D000332 ORTHO05D000268 1.7e-20 103.2 66 68.2
TPR.G25923 Trifolium pratense HOM05D000332 ORTHO05D000268 2.8e-20 102.4 66 66.7
arahy.Tifrunner.gnm1.ann1.4CX0EC Arachis hypogaea HOM05D000332 ORTHO05D000268 3.7e-20 102.1 63 74.6
arahy.Tifrunner.gnm1.ann1.PQR4B3 Arachis hypogaea HOM05D000332 ORTHO05D000268 3.7e-20 102.1 63 74.6
Lalb_Chr01g0006081 Lupinus albus HOM05D000332 ORTHO05D000268 8.3e-20 100.9 67 68.7
Medtr4g081100 Medicago truncatula HOM05D000332 ORTHO05D000268 8.3e-20 100.9 66 69.7
TPR.G19995 Trifolium pratense HOM05D000332 ORTHO05D000268 1.4e-19 100.1 252 40.9
Lalb_Chr19g0134791 Lupinus albus HOM05D000332 ORTHO05D000268 1.8e-19 99.8 68 73.5
Phvul.005G092700 Phaseolus vulgaris HOM05D000332 ORTHO05D000268 2.4e-19 99.4 86 60.5
Psat7g162520 Pisum sativum HOM05D000332 ORTHO05D000268 1.6e-18 96.7 66 65.2
VMungo1127G0123 Vigna mungo HOM05D000332 ORTHO05D000268 6.5e-17 91.3 60 68.3
Nitab4.5_0003397g0070 Nicotiana tabacum HOM05D000332 ORTHO05D000268 1.2e-13 80.5 61 57.4
Haze_09633 Corylus avellana HOM05D000332 ORTHO05D000268 5.7e-13 78.2 72 54.2
AUR62043222 Chenopodium quinoa HOM05D000332 ORTHO05D000268 7.5e-13 77.8 70 58.6
AUR62020532 Chenopodium quinoa HOM05D000332 ORTHO05D000268 9.8e-13 77.4 70 57.1
Cfa020402 Carpinus fangiana HOM05D000332 ORTHO05D000268 1.3e-12 77.0 72 52.8
RhsimUnG0252400 Rhododendron simsii HOM05D000332 ORTHO05D000268 2.2e-12 76.3 82 51.2
Hma1.2p1_0938F.1_g239100 Hydrangea macrophylla HOM05D000332 ORTHO05D000268 2.8e-12 75.9 75 49.3
SGA_v2.0_scaffold9G05049 Striga asiatica HOM05D000332 ORTHO05D000268 6.3e-12 74.7 57 54.4
CiPaw.12G127400 Carya illinoinensis HOM05D000332 ORTHO05D000268 8.3e-12 74.3 53 60.4
Oeu021409.1 Olea europaea HOM05D000332 ORTHO05D000268 1.4e-11 73.6 79 45.6
Cc05_g13360 Coffea canephora HOM05D000332 ORTHO05D000268 1.8e-11 73.2 67 53.7
Nn1g07061 Nelumbo nucifera HOM05D000332 ORTHO05D000268 1.8e-11 73.2 65 58.5
CiPaw.11G185200 Carya illinoinensis HOM05D000332 ORTHO05D000268 5.4e-11 71.6 65 49.2
Nitab4.5_0000092g0010 Nicotiana tabacum HOM05D000332 ORTHO05D000268 7.0e-11 71.2 50 64.0
vmacro09741 Vaccinium macrocarpon HOM05D000332 ORTHO05D000268 9.2e-11 70.9 80 50.0
ATR0697G117 Amborella trichopoda HOM05D000332 ORTHO05D000268 1.2e-10 70.5 66 51.5
Dinv40725 Davidia involucrata HOM05D000332 ORTHO05D000268 2.0e-10 69.7 66 54.5
Peaxi162Scf00000g08412 Petunia axillaris HOM05D000332 ORTHO05D000268 2.7e-10 69.3 61 50.8
CSS0040262 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D000268 3.5e-10 68.9 71 52.1
Nn1g03607 Nelumbo nucifera HOM05D000332 ORTHO05D000268 3.5e-10 68.9 69 50.7
Actinidia09926 Actinidia chinensis HOM05D000332 ORTHO05D000268 4.5e-10 68.6 76 51.3
Lj8C166T9 Lonicera japonica HOM05D000332 ORTHO05D000268 4.5e-10 68.6 47 61.7
Sc03g0008860 Simmondsia chinensis HOM05D000332 ORTHO05D000268 4.5e-10 68.6 51 68.6
Nitab4.5_0003452g0010 Nicotiana tabacum HOM05D000332 ORTHO05D000268 5.9e-10 68.2 67 47.8
Solyc07g064240.4 Solanum lycopersicum HOM05D000332 ORTHO05D000268 5.9e-10 68.2 61 52.5
A03p41820 Brassica napus HOM05D000332 ORTHO05D000268 1.0e-09 67.4 59 52.5
BraA03t13335Z Brassica rapa HOM05D000332 ORTHO05D000268 1.0e-09 67.4 59 52.5
BcaC08g43269 Brassica carinata HOM05D000332 ORTHO05D000268 1.7e-09 66.6 50 64.0
C06p06170 Brassica napus HOM05D000332 ORTHO05D000268 1.7e-09 66.6 50 64.0
BolC6t35728H Brassica oleracea HOM05D000332 ORTHO05D000268 1.7e-09 66.6 50 64.0
EL10Ac4g07937 Beta vulgaris HOM05D000332 ORTHO05D000268 2.3e-09 66.2 68 47.1
Cpa.g.sc97.50 Carica papaya HOM05D000332 ORTHO05D000268 2.3e-09 66.2 51 58.8
Ciclev10009420m.g Citrus clementina HOM05D000332 ORTHO05D000268 2.3e-09 66.2 55 49.1
Thhalv10011805m.g Eutrema salsugineum HOM05D000332 ORTHO05D000268 2.3e-09 66.2 50 64.0
MSTRG.6897 Avicennia marina HOM05D000332 ORTHO05D000268 2.9e-09 65.9 68 50.0
BcaC01g03548 Brassica carinata HOM05D000332 ORTHO05D000268 2.9e-09 65.9 59 50.8
C03p51200 Brassica napus HOM05D000332 ORTHO05D000268 2.9e-09 65.9 59 50.8
BolC3t17410H Brassica oleracea HOM05D000332 ORTHO05D000268 2.9e-09 65.9 59 50.8
Oeu062608.1 Olea europaea HOM05D000332 ORTHO05D000268 2.9e-09 65.9 57 52.6
THA.LOC104817883 Tarenaya hassleriana HOM05D000332 ORTHO05D000268 2.9e-09 65.9 61 49.2
BraA06t23485Z Brassica rapa HOM05D000332 ORTHO05D000268 3.8e-09 65.5 57 59.6
Carub.0003s2055 Capsella rubella HOM05D000332 ORTHO05D000268 3.8e-09 65.5 58 53.4
Manes.15G075300 Manihot esculenta HOM05D000332 ORTHO05D000268 3.8e-09 65.5 69 46.4
PGSC0003DMG400001038 Solanum tuberosum HOM05D000332 ORTHO05D000268 3.8e-09 65.5 61 50.8
BcaB06g26122 Brassica carinata HOM05D000332 ORTHO05D000268 5.0e-09 65.1 58 51.7
A05p28270 Brassica napus HOM05D000332 ORTHO05D000268 5.0e-09 65.1 58 51.7
BraA05t21709Z Brassica rapa HOM05D000332 ORTHO05D000268 5.0e-09 65.1 58 51.7
CAN.G337.98 Capsicum annuum HOM05D000332 ORTHO05D000268 5.0e-09 65.1 44 59.1
Aqoxy4G01972 Aquilegia oxysepala HOM05D000332 ORTHO05D000268 6.6e-09 64.7 75 48.0
MSTRG.15166 Avicennia marina HOM05D000332 ORTHO05D000268 6.6e-09 64.7 52 55.8
CARHR096360 Cardamine hirsuta HOM05D000332 ORTHO05D000268 6.6e-09 64.7 58 51.7
Thhalv10021550m.g Eutrema salsugineum HOM05D000332 ORTHO05D000268 6.6e-09 64.7 58 51.7
A06p02780 Brassica napus HOM05D000332 ORTHO05D000268 8.6e-09 64.3 57 57.9
PGR031G3234 Punica granatum HOM05D000332 ORTHO05D000268 8.6e-09 64.3 57 49.1
BcaB04g19115 Brassica carinata HOM05D000332 ORTHO05D000268 1.1e-08 63.9 59 50.8
BcaC05g28314 Brassica carinata HOM05D000332 ORTHO05D000268 1.1e-08 63.9 58 51.7
Dinv22292 Davidia involucrata HOM05D000332 ORTHO05D000268 1.1e-08 63.9 70 54.3
MBI18_g03010_MAGBIO Magnolia biondii HOM05D000332 ORTHO05D000268 1.1e-08 63.9 69 50.7
Nitab4.5_0000397g0230 Nicotiana tabacum HOM05D000332 ORTHO05D000268 1.1e-08 63.9 65 47.7
Sp3g18590 Schrenkiella parvula HOM05D000332 ORTHO05D000268 1.1e-08 63.9 58 51.7
Hund23295 Selenicereus undatus HOM05D000332 ORTHO05D000268 1.1e-08 63.9 51 58.8
Sopen07g032390 Solanum pennellii HOM05D000332 ORTHO05D000268 1.1e-08 63.9 45 57.8
TAR624G0621 Trochodendron aralioides HOM05D000332 ORTHO05D000268 1.1e-08 63.9 82 45.1
HPP92_009388 Vanilla planifolia HOM05D000332 ORTHO05D000268 1.1e-08 63.9 55 49.1
Aa31LG8G7380 Aethionema arabicum HOM05D000332 ORTHO05D000268 1.5e-08 63.5 56 53.6
C05p43750 Brassica napus HOM05D000332 ORTHO05D000268 1.5e-08 63.5 58 51.7
BolC5t33091H Brassica oleracea HOM05D000332 ORTHO05D000268 1.5e-08 63.5 58 51.7
Potri.001G419200 Populus trichocarpa HOM05D000332 ORTHO05D000268 1.5e-08 63.5 62 46.8
QL08p012676 Quercus lobata HOM05D000332 ORTHO05D000268 1.5e-08 63.5 46 63.0
GSVIVG01001982001 Vitis vinifera HOM05D000332 ORTHO05D000268 1.5e-08 63.5 75 50.7
Actinidia05117 Actinidia chinensis HOM05D000332 ORTHO05D000268 1.9e-08 63.2 76 46.1
Manes.03G128000 Manihot esculenta HOM05D000332 ORTHO05D000268 1.9e-08 63.2 50 60.0
Potri.011G135400 Populus trichocarpa HOM05D000332 ORTHO05D000268 1.9e-08 63.2 59 49.2
Sabra11G0121300 Salix brachista HOM05D000332 ORTHO05D000268 1.9e-08 63.2 51 52.9
BcaB07g33538 Brassica carinata HOM05D000332 ORTHO05D000268 2.5e-08 62.8 57 57.9
CSS0043089 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D000268 2.5e-08 62.8 83 41.0
Sp1g37700 Schrenkiella parvula HOM05D000332 ORTHO05D000268 2.5e-08 62.8 57 57.9
vmacro11757 Vaccinium macrocarpon HOM05D000332 ORTHO05D000268 2.5e-08 62.8 53 52.8
Eucgr.F02422 Eucalyptus grandis HOM05D000332 ORTHO05D000268 4.3e-08 62.0 51 51.0
SEGI_16720 Sequoiadendron giganteum HOM05D000332 ORTHO05D000268 4.3e-08 62.0 48 54.2
MSTRG.14423 Avicennia marina HOM05D000332 ORTHO05D000268 5.6e-08 61.6 68 50.0
CDE01G0061 Ceratophyllum demersum HOM05D000332 ORTHO05D000268 5.6e-08 61.6 47 55.3
Peaxi162Scf00450g00853 Petunia axillaris HOM05D000332 ORTHO05D000268 7.3e-08 61.2 73 47.9
BcaB04g20645 Brassica carinata HOM05D000332 ORTHO05D000268 9.5e-08 60.8 50 56.0
A01p34230 Brassica napus HOM05D000332 ORTHO05D000268 9.5e-08 60.8 50 56.0
PSO675G5483 Papaver somniferum HOM05D000332 ORTHO05D000268 9.5e-08 60.8 52 57.7
BcaC09g50966 Brassica carinata HOM05D000332 ORTHO05D000268 1.2e-07 60.5 50 54.0
C01p18660 Brassica napus HOM05D000332 ORTHO05D000268 1.2e-07 60.5 50 54.0
BolC1t01794H Brassica oleracea HOM05D000332 ORTHO05D000268 1.2e-07 60.5 50 54.0
Lj1P867T16 Lonicera japonica HOM05D000332 ORTHO05D000268 1.2e-07 60.5 34 70.6
Hund02119 Selenicereus undatus HOM05D000332 ORTHO05D000268 1.2e-07 60.5 56 55.4
AT3G20570 Arabidopsis thaliana HOM05D000332 ORTHO05D000268 2.1e-07 59.7 52 53.8
Atru.chr2.3236 Acer truncatum HOM05D000332 ORTHO05D000268 2.8e-07 59.3 54 46.3
MBI02_g22022_MAGBIO Magnolia biondii HOM05D000332 ORTHO05D000268 3.6e-07 58.9 54 50.0
Sed0010785 Sechium edule HOM05D000332 ORTHO05D000268 3.6e-07 58.9 50 52.0
AL3G34430 Arabidopsis lyrata HOM05D000332 ORTHO05D000268 4.7e-07 58.5 58 46.6
CDE05G3557 Ceratophyllum demersum HOM05D000332 ORTHO05D000268 4.7e-07 58.5 59 50.8
ClCG05G014640 Citrullus lanatus HOM05D000332 ORTHO05D000268 6.1e-07 58.2 50 50.0
MELO3C018095.2 Cucumis melo HOM05D000332 ORTHO05D000268 6.1e-07 58.2 50 48.0
CsaV3_3G023170 Cucumis sativus L. HOM05D000332 ORTHO05D000268 6.1e-07 58.2 50 48.0
CsaV3_UNG102750 Cucumis sativus L. HOM05D000332 ORTHO05D000268 6.1e-07 58.2 50 48.0
MD03G1209600 Malus domestica HOM05D000332 ORTHO05D000268 6.1e-07 58.2 78 39.7
PSO541G3007 Papaver somniferum HOM05D000332 ORTHO05D000268 6.1e-07 58.2 52 55.8
Thecc.07G012800 Theobroma cacao HOM05D000332 ORTHO05D000268 6.1e-07 58.2 52 46.2
HanXRQChr11g0337901 Helianthus annuus HOM05D000332 ORTHO05D000268 8.0e-07 57.8 50 54.0
SEGI_15527 Sequoiadendron giganteum HOM05D000332 ORTHO05D000268 8.0e-07 57.8 50 46.0
MELO3C025405.2 Cucumis melo HOM05D000332 ORTHO05D000268 1.0e-06 57.4 51 54.9
Oeu042919.2 Olea europaea HOM05D000332 ORTHO05D000268 1.0e-06 57.4 40 62.5
MD11G1224400 Malus domestica HOM05D000332 ORTHO05D000268 1.4e-06 57.0 67 40.3
HanXRQChr05g0159191 Helianthus annuus HOM05D000332 ORTHO05D000268 1.8e-06 56.6 50 56.0
ATR0810G088 Amborella trichopoda HOM05D000332 ORTHO05D008535 2.3e-06 56.2 64 46.9
vmacro17642 Vaccinium macrocarpon HOM05D000332 ORTHO05D000268 2.3e-06 56.2 66 40.9
Eucgr.F03437 Eucalyptus grandis HOM05D000332 ORTHO05D000268 3.0e-06 55.8 51 52.9
PSO210G5067 Papaver somniferum HOM05D000332 ORTHO05D000268 3.0e-06 55.8 71 45.1
Actinidia05000 Actinidia chinensis HOM05D000332 ORTHO05D000268 5.2e-06 55.1 39 51.3
Actinidia10717 Actinidia chinensis HOM05D000332 ORTHO05D000268 5.2e-06 55.1 83 42.2
COL.COLO4_09590 Corchorus olitorius HOM05D000332 ORTHO05D000268 5.2e-06 55.1 69 42.0
PSO478G0124 Papaver somniferum HOM05D000332 ORTHO05D000268 5.2e-06 55.1 54 44.4
PSO676G0020 Papaver somniferum HOM05D000332 ORTHO05D000268 5.2e-06 55.1 54 46.3
PSO782G4861 Papaver somniferum HOM05D000332 ORTHO05D000268 5.2e-06 55.1 54 44.4
CAN.G587.73 Capsicum annuum HOM05D000332 ORTHO05D000268 6.8e-06 54.7 59 44.1
ClCG10G005610 Citrullus lanatus HOM05D000332 ORTHO05D000268 6.8e-06 54.7 65 44.6
Duzib170G0272 Durio zibethinus HOM05D000332 ORTHO05D000268 6.8e-06 54.7 66 37.9
Sed0008825 Sechium edule HOM05D000332 ORTHO05D000268 6.8e-06 54.7 63 47.6
SEGI_37125 Sequoiadendron giganteum HOM05D000332 ORTHO05D000268 6.8e-06 54.7 61 39.3
TWI39G0865 Tripterygium wilfordii HOM05D000332 ORTHO05D000268 6.8e-06 54.7 67 44.8
Oeu057106.1 Olea europaea HOM05D000332 ORTHO05D000268 8.9e-06 54.3 61 37.7
TAR622G0309 Trochodendron aralioides HOM05D000332 ORTHO05D000268 8.9e-06 54.3 39 59.0


User provided reference genes

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