Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.8e-263 911.0 464 100.0
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.8e-263 911.0 464 100.0
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 8.3e-194 680.6 493 74.8
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 9.1e-193 677.2 504 73.2
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 3.2e-190 668.7 508 72.2
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 2.2e-186 656.0 491 72.9
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 1.9e-182 642.9 511 69.9
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.8e-172 609.8 511 66.3
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 8.9e-164 580.9 508 65.2
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 8.1e-157 557.8 490 65.5
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 8.4e-154 547.7 410 71.7
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 2.4e-145 519.6 562 56.8
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.5e-139 500.4 514 55.4
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 2.7e-136 489.6 512 54.7
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 2.6e-131 473.0 487 56.5
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 4.5e-131 472.2 392 62.5
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 1.7e-130 470.3 497 54.3
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.1e-129 467.6 422 58.8
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.6e-128 463.8 434 58.1
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 6.0e-128 461.8 456 57.7
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 3.0e-127 459.5 399 62.7
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 8.7e-127 458.0 443 56.9
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 8.7e-127 458.0 484 54.1
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.1e-126 457.6 443 56.7
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.5e-126 457.2 385 63.6
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 1.6e-125 453.8 391 60.4
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 6.2e-125 451.8 433 58.7
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 8.1e-125 451.4 453 55.6
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.4e-124 450.7 416 58.9
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.4e-124 450.7 463 54.9
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.1e-124 449.5 412 60.2
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.5e-123 447.2 412 56.6
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 3.8e-122 442.6 411 59.9
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.9e-118 430.3 439 56.5
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 3.3e-118 429.5 482 51.0
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 5.3e-116 422.2 336 63.1
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.2e-115 421.0 479 51.6
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 4.5e-115 419.1 431 53.6
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 7.6e-115 418.3 457 51.9
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 2.9e-114 416.4 381 59.6
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 6.5e-114 415.2 390 55.9
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.9e-113 413.7 351 59.5
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 2.5e-113 413.3 420 56.4
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 4.6e-112 409.1 436 55.3
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 7.9e-112 408.3 423 52.5
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 1.3e-111 407.5 451 51.4
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 5.1e-111 405.6 395 55.7
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 3.3e-110 402.9 457 50.3
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 4.3e-110 402.5 363 57.0
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 7.4e-110 401.7 377 54.4
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 2.2e-109 400.2 423 51.3
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 3.7e-109 399.4 514 47.1
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 3.7e-109 399.4 457 52.1
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 4.8e-109 399.1 497 48.3
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 8.2e-109 398.3 356 56.7
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 6.9e-108 395.2 365 56.2
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.5e-107 394.0 410 53.2
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 1.5e-107 394.0 470 50.9
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 3.4e-107 392.9 350 58.9
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 5.9e-107 392.1 486 47.1
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.3e-106 391.0 370 55.1
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.3e-106 391.0 374 54.0
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.3e-106 391.0 472 48.7
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 2.2e-106 390.2 467 48.6
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 2.2e-106 390.2 524 45.4
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 6.5e-106 388.7 502 46.8
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 8.5e-106 388.3 393 53.4
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.4e-105 387.5 425 49.4
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 3.2e-105 386.3 376 52.7
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 7.2e-105 385.2 499 46.3
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 3.6e-104 382.9 488 46.3
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 3.6e-104 382.9 418 51.0
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 7.9e-104 381.7 342 57.9
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.0e-103 381.3 425 52.2
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.1e-102 377.9 342 57.6
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.5e-102 376.7 387 51.4
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 4.3e-102 375.9 435 47.8
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 4.3e-102 375.9 509 46.0
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.3e-101 372.1 456 49.8
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 1.8e-100 370.5 347 54.5
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 3.1e-100 369.8 345 55.9
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.6e-99 366.7 442 48.0
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 4.5e-99 365.9 473 45.7
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 7.9e-96 355.1 407 47.4
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 2.3e-95 353.6 458 46.3
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.1e-95 352.4 216 84.3
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 2.0e-94 350.5 374 51.3
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 3.1e-92 343.2 367 52.6
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.2e-91 341.3 372 51.1
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 2.7e-88 330.1 315 57.8
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 1.8e-87 327.4 358 53.6
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 2.8e-85 320.1 364 47.5
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 1.6e-83 314.3 477 44.4
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 7.2e-81 305.4 427 43.6
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 5.5e-73 279.3 358 44.4
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 7.2e-73 278.9 329 48.3
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.6e-72 277.7 358 44.1
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.2e-70 271.6 301 49.8
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 5.4e-68 262.7 427 41.2
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 1.9e-65 254.2 293 46.8
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 7.3e-65 252.3 336 41.4
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 8.9e-63 245.4 343 39.4
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 1.2e-56 224.9 301 40.5
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 3.6e-56 223.4 316 40.5
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 8.0e-56 222.2 177 67.8
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.7e-53 213.4 185 60.0
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 3.5e-51 206.8 243 51.4
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 3.3e-41 173.7 206 51.0
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 1.8e-31 141.4 205 42.9
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 3.1e-31 140.6 196 41.8
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 3.2e-28 130.6 131 53.4
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 2.5e-25 120.9 133 48.9
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 5.1e-18 96.7 266 27.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.8e-15 88.2 86 53.5
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 9.3e-12 75.9 67 58.2
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.0e-10 70.9 70 50.0
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 2.5e-09 67.8 52 67.3
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 5.6e-09 66.6 113 35.4
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.2e-06 58.9 89 36.0


User provided reference genes

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