Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01575_v3 Cicer arietinum L. HOM05D003137 ORTHO05D003433 3.3e-36 154.5 74 100.0
Lj3g0011099 Lotus japonicus HOM05D003137 ORTHO05D003433 1.4e-26 122.5 71 78.9
Psat5g265400 Pisum sativum HOM05D003137 ORTHO05D003433 6.9e-26 120.2 71 80.3
TPR.G4191 Trifolium pratense HOM05D003137 ORTHO05D003433 1.3e-24 115.9 71 74.6
Medtr2g088870 Medicago truncatula HOM05D003137 ORTHO05D003433 2.9e-24 114.8 66 78.8
Glyma.12G196001 Glycine max HOM05D003137 ORTHO05D003433 4.2e-23 110.9 71 70.4
Glyma.13G306500 Glycine max HOM05D003137 ORTHO05D003433 1.6e-22 109.0 71 73.2
arahy.Tifrunner.gnm1.ann1.HIPE1N Arachis hypogaea HOM05D003137 ORTHO05D003433 2.1e-22 108.6 71 71.8
arahy.Tifrunner.gnm1.ann1.U40R6G Arachis hypogaea HOM05D003137 ORTHO05D003433 2.1e-22 108.6 71 71.8
VMungo1080G0481 Vigna mungo HOM05D003137 ORTHO05D003433 1.3e-21 105.9 71 67.6
Phvul.005G113400 Phaseolus vulgaris HOM05D003137 ORTHO05D003433 5.1e-21 104.0 71 67.6
SalBow6G6965 Salvia bowleyana HOM05D003137 ORTHO05D003433 1.1e-18 96.3 72 61.1
QL08p033861 Quercus lobata HOM05D003137 ORTHO05D003433 1.8e-18 95.5 72 65.3
Lalb_Chr01g0005541 Lupinus albus HOM05D003137 ORTHO05D003433 2.4e-18 95.1 71 64.8
arahy.Tifrunner.gnm1.ann1.2E7M4N Arachis hypogaea HOM05D003137 ORTHO05D003433 6.9e-18 93.6 64 67.2
Haze_12901 Corylus avellana HOM05D003137 ORTHO05D003433 2.0e-17 92.0 72 63.9
Cfa014440 Carpinus fangiana HOM05D003137 ORTHO05D003433 3.4e-17 91.3 72 63.9
MSTRG.25153 Avicennia marina HOM05D003137 ORTHO05D003433 7.6e-17 90.1 72 62.5
CAN.G1126.28 Capsicum annuum HOM05D003137 ORTHO05D003433 3.8e-16 87.8 65 63.1
SalBow7G2186 Salvia bowleyana HOM05D003137 ORTHO05D003433 3.8e-16 87.8 72 61.1
Migut.C00698 Erythranthe guttata HOM05D003137 ORTHO05D003433 6.4e-16 87.0 72 54.2
Prupe.3G220700 Prunus persica HOM05D003137 ORTHO05D003433 6.4e-16 87.0 72 61.1
Cc10_g03200 Coffea canephora HOM05D003137 ORTHO05D003433 8.4e-16 86.7 72 59.7
Dinv39684 Davidia involucrata HOM05D003137 ORTHO05D003433 8.4e-16 86.7 69 58.0
Nitab4.5_0000110g0420 Nicotiana tabacum HOM05D003137 ORTHO05D003433 1.4e-15 85.9 72 58.3
Nitab4.5_0003246g0110 Nicotiana tabacum HOM05D003137 ORTHO05D003433 1.4e-15 85.9 72 58.3
CiPaw.04G118000 Carya illinoinensis HOM05D003137 ORTHO05D003433 2.4e-15 85.1 72 61.1
PGSC0003DMG402027860 Solanum tuberosum HOM05D003137 ORTHO05D003433 7.1e-15 83.6 72 58.3
Lj8C37T5 Lonicera japonica HOM05D003137 ORTHO05D003433 9.3e-15 83.2 73 56.2
Peaxi162Scf00057g00421 Petunia axillaris HOM05D003137 ORTHO05D003433 1.2e-14 82.8 72 56.9
SGA_v2.0_scaffold48G18065 Striga asiatica HOM05D003137 ORTHO05D003433 1.2e-14 82.8 72 56.9
Actinidia11210 Actinidia chinensis HOM05D003137 ORTHO05D003433 1.6e-14 82.4 73 57.5
MD09G1104800 Malus domestica HOM05D003137 ORTHO05D003433 1.6e-14 82.4 75 57.3
MD17G1092500 Malus domestica HOM05D003137 ORTHO05D003433 3.5e-14 81.3 75 57.3
Solyc04g080050.4 Solanum lycopersicum HOM05D003137 ORTHO05D003433 3.5e-14 81.3 72 56.9
Sopen04g033640 Solanum pennellii HOM05D003137 ORTHO05D003433 3.5e-14 81.3 72 56.9
CiPaw.03G163200 Carya illinoinensis HOM05D003137 ORTHO05D003433 4.6e-14 80.9 72 58.3
GSVIVG01030627001 Vitis vinifera HOM05D003137 ORTHO05D003433 4.6e-14 80.9 72 52.8
Oeu016738.1 Olea europaea HOM05D003137 ORTHO05D003433 7.9e-14 80.1 72 55.6
Sed0002741 Sechium edule HOM05D003137 ORTHO05D003433 1.3e-13 79.3 75 57.3
CANSAT64G2088 Cannabis sativa HOM05D003137 ORTHO05D003433 3.0e-13 78.2 72 55.6
Manes.13G073300 Manihot esculenta HOM05D003137 ORTHO05D003433 3.0e-13 78.2 72 55.6
Thecc.02G162600 Theobroma cacao HOM05D003137 ORTHO05D003433 3.0e-13 78.2 72 58.3
vmacro14192 Vaccinium macrocarpon HOM05D003137 ORTHO05D003433 3.9e-13 77.8 72 55.6
CSS0047433 Camellia sinensis var. sinensis HOM05D003137 ORTHO05D003433 5.1e-13 77.4 74 54.1
SGA_v2.0_scaffold24G10245 Striga asiatica HOM05D003137 ORTHO05D003433 5.1e-13 77.4 72 54.2
FvH4_6g43560 Fragaria vesca HOM05D003137 ORTHO05D003433 6.7e-13 77.0 81 51.9
FAN05G0260 Fragaria x ananassa HOM05D003137 ORTHO05D003433 6.7e-13 77.0 81 51.9
Cpa.g.sc8.238 Carica papaya HOM05D003137 ORTHO05D003433 1.1e-12 76.3 72 58.3
Sabra17G0026100 Salix brachista HOM05D003137 ORTHO05D003433 1.1e-12 76.3 72 56.9
DCAR_020205 Daucus carota HOM05D003137 ORTHO05D003433 1.5e-12 75.9 71 49.3
Potri.007G121400 Populus trichocarpa HOM05D003137 ORTHO05D003433 1.5e-12 75.9 72 58.3
FAN09G4236 Fragaria x ananassa HOM05D003137 ORTHO05D003433 1.9e-12 75.5 81 50.6
TWI75G1854 Tripterygium wilfordii HOM05D003137 ORTHO05D003433 2.5e-12 75.1 72 55.6
FAN14G4002 Fragaria x ananassa HOM05D003137 ORTHO05D003433 3.3e-12 74.7 81 50.6
Gohir.A01G013400 Gossypium hirsutum HOM05D003137 ORTHO05D003433 5.6e-12 73.9 72 52.8
Gohir.D01G014700 Gossypium hirsutum HOM05D003137 ORTHO05D003433 5.6e-12 73.9 72 52.8
Gorai.002G016400 Gossypium raimondii HOM05D003137 ORTHO05D003433 5.6e-12 73.9 72 52.8
ClCG04G004390 Citrullus lanatus HOM05D003137 ORTHO05D003433 7.4e-12 73.6 76 56.6
Ciclev10015128m.g Citrus clementina HOM05D003137 ORTHO05D003433 7.4e-12 73.6 72 58.3
Duzib132G0891 Durio zibethinus HOM05D003137 ORTHO05D003433 7.4e-12 73.6 72 55.6
Rhsim07G0131000 Rhododendron simsii HOM05D003137 ORTHO05D003433 9.6e-12 73.2 75 50.7
MELO3C019066.2 Cucumis melo HOM05D003137 ORTHO05D003433 1.6e-11 72.4 76 56.6
CsaV3_4G029720 Cucumis sativus L. HOM05D003137 ORTHO05D003433 1.6e-11 72.4 76 56.6
Eucgr.K00863 Eucalyptus grandis HOM05D003137 ORTHO05D003433 3.7e-11 71.2 72 52.8
TWI18G1074 Tripterygium wilfordii HOM05D003137 ORTHO05D003433 3.7e-11 71.2 72 52.8
COL.COLO4_12992 Corchorus olitorius HOM05D003137 ORTHO05D003433 4.8e-11 70.9 74 56.8
DCAR_009428 Daucus carota HOM05D003137 ORTHO05D003433 4.8e-11 70.9 71 47.9
AUR62027561 Chenopodium quinoa HOM05D003137 ORTHO05D003433 4.0e-10 67.8 73 53.4
Sc21g0001670 Simmondsia chinensis HOM05D003137 ORTHO05D003433 5.3e-10 67.4 71 49.3
unitig_46.g17923 Utricularia gibba HOM05D001026 ORTHO05D005232 6.9e-10 67.0 72 50.0
RcHm_v2.0_Chr2g0160141 Rosa chinensis HOM05D003137 ORTHO05D003433 1.2e-09 66.2 72 51.4
PGR042G2833 Punica granatum HOM05D003137 ORTHO05D003433 1.5e-09 65.9 72 55.6
Atru.chr6.3141 Acer truncatum HOM05D003137 ORTHO05D003433 3.4e-09 64.7 72 51.4
Lalb_Chr24g0393061 Lupinus albus HOM05D003137 ORTHO05D003433 3.4e-09 64.7 95 44.2
Ah.14g086720 Amaranthus hybridus HOM05D003137 ORTHO05D003433 4.5e-09 64.3 73 50.7
PGSC0003DMG400031494 Solanum tuberosum HOM05D003137 ORTHO05D003433 5.8e-09 63.9 64 54.7
CAN.G655.3 Capsicum annuum HOM05D003137 ORTHO05D003433 7.6e-09 63.5 64 53.1
EL10Ac8g19786 Beta vulgaris HOM05D003137 ORTHO05D003433 1.7e-08 62.4 73 49.3
arahy.Tifrunner.gnm1.ann1.D87ERS Arachis hypogaea HOM05D003137 ORTHO05D003433 4.9e-08 60.8 44 59.1
PSO478G0754 Papaver somniferum HOM05D003137 ORTHO05D003433 4.9e-08 60.8 72 47.2
PSO782G4462 Papaver somniferum HOM05D003137 ORTHO05D003433 4.9e-08 60.8 72 47.2
HanXRQChr17g0560951 Helianthus annuus HOM05D003137 ORTHO05D003433 4.2e-07 57.8 73 43.8
Potri.017G039000 Populus trichocarpa HOM05D003137 ORTHO05D003433 5.5e-07 57.4 72 47.2
ATR0787G213 Amborella trichopoda HOM05D003137 ORTHO05D003433 7.1e-07 57.0 72 44.4
Lsat_1_v5_gn_8_129381 Lactuca sativa HOM05D003137 ORTHO05D003433 7.1e-07 57.0 70 42.9
THA.LOC104827598 Tarenaya hassleriana HOM05D003137 ORTHO05D003433 7.1e-07 57.0 65 49.2
Hund21479 Selenicereus undatus HOM05D003137 ORTHO05D003433 1.2e-06 56.2 68 44.1
Nn4g22018 Nelumbo nucifera HOM05D003137 ORTHO05D003433 2.1e-06 55.5 81 42.0
Sp7g06520 Schrenkiella parvula HOM05D003137 ORTHO05D003433 2.7e-06 55.1 65 43.1
CDE02G0387 Ceratophyllum demersum HOM05D003137 ORTHO05D003433 3.5e-06 54.7 69 42.0
CARHR216920 Cardamine hirsuta HOM05D003137 ORTHO05D003433 4.6e-06 54.3 65 41.5


User provided reference genes

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