Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01568_v3 Cicer arietinum L. HOM05D007783 ORTHO05D009740 1.1e-38 163.7 152 100.0
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 1.4e-17 93.6 150 66.7
Lj3g0010205 Lotus japonicus HOM05D007783 ORTHO05D009740 3.5e-16 89.0 161 62.7
Psat5g265520 Pisum sativum HOM05D007783 ORTHO05D009740 1.0e-12 77.4 158 67.1
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 5.2e-12 75.1 67 62.7
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 3.4e-11 72.4 65 64.6
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 7.5e-11 71.2 57 68.4
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 1.3e-10 70.5 64 57.8
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 1.3e-10 70.5 69 59.4
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 1.7e-10 70.1 64 60.9
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 2.9e-10 69.3 69 59.4
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 3.7e-10 68.9 67 59.7
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 3.7e-10 68.9 59 62.7
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 4.9e-10 68.6 64 57.8
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 6.4e-10 68.2 62 61.3
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.1e-09 67.4 66 63.6
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 1.8e-09 66.6 60 65.0
Prupe.3G221700 Prunus persica HOM05D007783 ORTHO05D009740 4.1e-09 65.5 72 54.2
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 5.4e-09 65.1 58 65.5
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 5.4e-09 65.1 67 61.2
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 5.4e-09 65.1 63 58.7
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 5.4e-09 65.1 63 58.7
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 5.4e-09 65.1 73 56.2
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 5.4e-09 65.1 77 51.9
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 5.4e-09 65.1 47 72.3
Cpa.g.sc8.247 Carica papaya HOM05D007783 ORTHO05D009740 7.0e-09 64.7 59 59.3
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 7.0e-09 64.7 68 58.8
Peaxi162Scf00007g01310 Petunia axillaris HOM05D007783 ORTHO05D009740 9.2e-09 64.3 64 65.6
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 1.2e-08 63.9 65 60.0
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 1.6e-08 63.5 51 70.6
Potri.007G120101 Populus trichocarpa HOM05D007783 ORTHO05D009740 1.6e-08 63.5 68 54.4
Lsat_1_v5_gn_8_129821 Lactuca sativa HOM05D007783 ORTHO05D009740 2.0e-08 63.2 66 51.5
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 2.7e-08 62.8 60 61.7
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 2.7e-08 62.8 63 57.1
Glyma.12G103000 Glycine max HOM05D007783 ORTHO05D009740 2.7e-08 62.8 63 65.1
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.7e-08 62.8 57 64.9
Sabra17G0027500 Salix brachista HOM05D007783 ORTHO05D009740 2.7e-08 62.8 68 50.0
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 3.5e-08 62.4 62 61.3
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 3.5e-08 62.4 65 58.5
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 3.5e-08 62.4 68 57.4
THA.LOC104802538 Tarenaya hassleriana HOM05D007783 ORTHO05D009740 3.5e-08 62.4 47 68.1
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 3.5e-08 62.4 67 56.7
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 4.6e-08 62.0 58 58.6
MELO3C018795.2 Cucumis melo HOM05D007783 ORTHO05D009740 5.9e-08 61.6 60 63.3
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 5.9e-08 61.6 67 59.7
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 5.9e-08 61.6 67 59.7
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 5.9e-08 61.6 72 52.8
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 7.8e-08 61.2 59 57.6
Glyma.12G197200 Glycine max HOM05D007783 ORTHO05D009740 7.8e-08 61.2 154 56.5
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 7.8e-08 61.2 67 56.7
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 7.8e-08 61.2 61 55.7
Cfa021131 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.0e-07 60.8 70 54.3
Cfa021551 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.0e-07 60.8 70 55.7
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.0e-07 60.8 67 59.7
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 1.7e-07 60.1 49 63.3
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 1.7e-07 60.1 68 55.9
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.3e-07 59.7 55 65.5
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 2.3e-07 59.7 55 65.5
ECA246G5319 Erigeron canadensis HOM05D007783 ORTHO05D009740 3.0e-07 59.3 68 48.5
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 3.0e-07 59.3 66 54.5
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 3.9e-07 58.9 65 50.8
Aqoxy4G02125 Aquilegia oxysepala HOM05D007783 ORTHO05D009740 5.0e-07 58.5 63 55.6
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 5.0e-07 58.5 70 52.9
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 5.0e-07 58.5 51 62.7
unitig_749.g13945 Utricularia gibba HOM05D006348 ORTHO05D009740 8.6e-07 57.8 68 47.1
CSS0046432 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 1.1e-06 57.4 59 55.9
DCAR_012961 Daucus carota HOM05D007783 ORTHO05D009740 1.1e-06 57.4 65 53.8
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 1.5e-06 57.0 55 60.0
Sp3g19900 Schrenkiella parvula HOM05D007783 ORTHO05D009740 1.5e-06 57.0 49 63.3
EL10Ac3g05472 Beta vulgaris HOM05D007783 ORTHO05D009740 2.5e-06 56.2 64 53.1
Sabra07G0097600 Salix brachista HOM05D007783 ORTHO05D009740 2.5e-06 56.2 68 51.5
SGA_v2.0_scaffold49G18329 Striga asiatica HOM05D007783 ORTHO05D009740 3.3e-06 55.8 54 55.6
AL3G36260 Arabidopsis lyrata HOM05D007783 ORTHO05D009740 4.3e-06 55.5 62 53.2
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 4.3e-06 55.5 61 50.8
C05p41370 Brassica napus HOM05D007783 ORTHO05D009740 5.6e-06 55.1 71 52.1
Sc21g0001790 Simmondsia chinensis HOM05D007783 ORTHO05D009740 5.6e-06 55.1 52 59.6


User provided reference genes

Program Settings