Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 1.2e-150 537.0 363 100.0
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 3.8e-93 345.9 358 77.1
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 4.5e-86 322.4 239 73.2
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 3.5e-83 312.8 212 75.9
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 7.9e-83 311.6 212 75.9
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 3.8e-69 266.2 206 71.4
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 1.4e-68 264.2 207 68.6
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 1.7e-53 214.2 215 58.6
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 2.2e-53 213.8 184 63.0
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 6.5e-53 212.2 181 62.4
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 5.7e-49 199.1 210 59.5
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 4.5e-46 189.5 185 62.7
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 1.1e-44 184.9 142 66.2
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 6.1e-35 152.5 182 45.1
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 6.1e-35 152.5 175 47.4
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 6.1e-35 152.5 190 45.3
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 1.4e-34 151.4 189 46.0
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 1.8e-34 151.0 187 46.5
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 2.3e-34 150.6 191 43.5
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 3.4e-33 146.7 167 49.7
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 4.4e-33 146.4 185 44.9
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 4.4e-33 146.4 190 44.7
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 9.8e-33 145.2 174 45.4
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 9.8e-33 145.2 196 43.9
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 1.7e-32 144.4 194 44.3
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 2.2e-32 144.1 215 41.9
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 1.8e-31 141.0 194 40.7
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 3.1e-31 140.2 192 42.2
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 4.1e-31 139.8 162 46.9
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 1.2e-30 138.3 190 43.2
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.2e-30 138.3 167 46.7
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 1.6e-30 137.9 188 41.5
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.6e-30 137.9 167 47.3
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 2.0e-30 137.5 166 44.6
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 2.0e-30 137.5 166 44.6
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 2.0e-30 137.5 199 42.2
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 4.5e-30 136.3 162 43.2
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 4.5e-30 136.3 187 44.4
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 1.7e-29 134.4 186 41.4
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 2.9e-29 133.7 181 42.5
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 3.8e-29 133.3 176 40.9
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 3.8e-29 133.3 204 40.2
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 8.6e-29 132.1 229 34.1
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 8.6e-29 132.1 190 42.6
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 1.1e-28 131.7 189 39.2
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 1.9e-28 131.0 193 36.8
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 5.5e-28 129.4 191 40.8
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 9.5e-28 128.6 193 40.9
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 1.2e-27 128.3 189 40.7
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 4.7e-27 126.3 173 42.8
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 1.0e-26 125.2 191 39.8
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 2.3e-26 124.0 169 42.0
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 2.3e-26 124.0 169 42.6
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 2.3e-26 124.0 169 42.6
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 5.2e-26 122.9 190 39.5
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 5.2e-26 122.9 169 41.4
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 1.5e-25 121.3 175 40.0
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 3.4e-25 120.2 174 42.5
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 4.4e-25 119.8 209 39.2
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 7.5e-25 119.0 127 50.4
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 7.5e-25 119.0 185 40.5
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 3.7e-24 116.7 191 37.2
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 3.7e-24 116.7 146 43.2
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.8e-23 114.4 165 37.6
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 2.4e-23 114.0 165 37.6
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 3.1e-23 113.6 178 37.6
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 3.1e-23 113.6 201 33.8
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 3.1e-23 113.6 165 37.0
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 3.1e-23 113.6 191 35.6
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 5.4e-23 112.8 165 40.0
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 2.7e-22 110.5 200 32.5
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 1.3e-21 108.2 169 37.3
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.3e-21 108.2 166 36.7
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.3e-21 108.2 166 36.7
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 1.7e-21 107.8 152 38.8
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 3.9e-21 106.7 196 34.7
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 1.5e-20 104.8 166 37.3
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 3.3e-20 103.6 185 38.9
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 7.3e-20 102.4 168 36.9
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 4.7e-19 99.8 169 33.1
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 2.3e-18 97.4 164 36.0
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 5.2e-18 96.3 169 30.2
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 3.4e-17 93.6 172 34.9
Glyma.12G201200 Glycine max HOM05D007281 ORTHO05D009241 4.4e-17 93.2 74 67.6
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 1.1e-15 88.6 114 39.5
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 1.9e-15 87.8 157 33.8
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 6.0e-14 82.8 150 36.0
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 1.1e-12 78.6 116 34.5
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 5.6e-12 76.3 118 32.2
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 9.5e-12 75.5 132 34.1
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 1.2e-11 75.1 168 31.0
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 2.8e-11 73.9 88 46.6
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 1.1e-10 72.0 128 33.6
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.1e-10 72.0 128 33.6
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 1.4e-10 71.6 119 31.9
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.4e-10 71.6 131 31.3
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 2.3e-10 70.9 110 38.2
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 3.1e-10 70.5 119 31.1
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 1.5e-09 68.2 121 31.4
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 5.8e-09 66.2 161 32.9
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 2.2e-08 64.3 98 33.7
Sopen11g004540 Solanum pennellii HOM05D006232 ORTHO05D007746 8.3e-08 62.4 182 26.4
CAN.G691.16 Capsicum annuum HOM05D006232 ORTHO05D007746 1.1e-07 62.0 179 27.4
Aqoxy3G03779 Aquilegia oxysepala HOM05D006232 ORTHO05D007746 1.4e-07 61.6 220 25.9
Solyc11g008760.3 Solanum lycopersicum HOM05D006232 ORTHO05D007746 1.9e-07 61.2 183 26.2
PGSC0003DMG400016173 Solanum tuberosum HOM05D006232 ORTHO05D007746 4.1e-07 60.1 182 25.8
Duzib150G1100 Durio zibethinus HOM05D000001 ORTHO05D000003 7.0e-07 59.3 174 25.9
CDE09G0095 Ceratophyllum demersum HOM05D006232 ORTHO05D007746 9.2e-07 58.9 222 21.6
Gohir.A05G020800 Gossypium hirsutum HOM05D000001 ORTHO05D000003 9.2e-07 58.9 174 26.4
Gohir.D05G021900 Gossypium hirsutum HOM05D000001 ORTHO05D000003 9.2e-07 58.9 174 26.4
Gorai.009G022200 Gossypium raimondii HOM05D000001 ORTHO05D000003 9.2e-07 58.9 174 26.4
QL08p048137 Quercus lobata HOM05D006232 ORTHO05D007746 9.2e-07 58.9 176 25.0
BcaB01g02134 Brassica carinata HOM05D006232 ORTHO05D007746 1.2e-06 58.5 232 24.6
Nitab4.5_0001677g0020 Nicotiana tabacum HOM05D006232 ORTHO05D007746 1.2e-06 58.5 176 25.6
Lalb_Chr15g0076621 Lupinus albus HOM05D006232 ORTHO05D007746 1.6e-06 58.2 176 26.1
Glyma.11G135300 Glycine max HOM05D006232 ORTHO05D007746 2.7e-06 57.4 158 27.8


User provided reference genes

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