Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 9.2e-63 243.4 127 100.0
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 4.8e-43 177.9 129 70.5
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 8.1e-43 177.2 132 71.2
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 1.6e-35 152.9 127 64.6
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 8.7e-29 130.6 127 59.8
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 1.1e-28 130.2 134 58.2
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 7.6e-25 117.5 135 53.3
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 2.7e-22 109.0 128 56.2
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 3.9e-21 105.1 134 50.0
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 3.7e-19 98.6 133 48.1
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 6.3e-19 97.8 127 50.4
Phvul.005G106200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 1.1e-18 97.1 156 46.8
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 1.4e-18 96.7 134 50.0
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 2.9e-16 89.0 157 44.6
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 2.5e-15 85.9 126 43.7
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 4.6e-14 81.6 133 47.4
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 4.6e-14 81.6 120 45.8
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 6.1e-14 81.3 128 51.6
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.4e-13 80.1 111 48.6
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 5.1e-13 78.2 120 45.0
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 2.5e-12 75.9 120 41.7
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 3.3e-12 75.5 124 44.4
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 5.7e-12 74.7 140 46.4
TPR.G21773 Trifolium pratense HOM05D006722 ORTHO05D007944 7.4e-12 74.3 115 46.1
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 7.4e-12 74.3 121 42.1
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 6.3e-11 71.2 117 44.4
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 6.3e-11 71.2 117 44.4
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 6.3e-11 71.2 117 44.4
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 8.2e-11 70.9 107 45.8
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 1.1e-10 70.5 133 41.4
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 1.1e-10 70.5 133 41.4
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.1e-10 70.5 120 40.8
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.8e-10 69.7 140 45.7
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 5.3e-10 68.2 134 36.6
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 3.4e-09 65.5 163 35.6
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 5.9e-09 64.7 118 37.3
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 5.9e-09 64.7 126 41.3
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 7.7e-09 64.3 134 34.3
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 7.7e-09 64.3 141 36.9
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.0e-08 63.9 135 39.3
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.3e-08 63.5 124 41.1
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 5.0e-08 61.6 136 36.0
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 5.0e-08 61.6 142 35.2
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 5.0e-08 61.6 126 39.7
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 8.5e-08 60.8 125 40.0
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 1.1e-07 60.5 130 37.7
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 1.4e-07 60.1 121 44.6
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.9e-07 59.7 117 39.3
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 2.5e-07 59.3 94 42.6
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 4.2e-07 58.5 124 38.7
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 5.5e-07 58.2 83 45.8
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 9.4e-07 57.4 118 40.7
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 9.4e-07 57.4 96 44.8
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 1.2e-06 57.0 39 74.4
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 1.2e-06 57.0 116 38.8
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 4.7e-06 55.1 127 36.2
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 7.9e-06 54.3 133 34.6


User provided reference genes

Program Settings