Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 3.6e-39 164.5 85 100.0
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 2.6e-37 158.3 85 94.1
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 1.7e-36 155.6 85 91.8
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.7e-36 155.6 85 92.9
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 8.4e-36 153.3 85 90.6
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.1e-35 152.9 85 91.8
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.6e-34 149.1 85 88.2
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.1e-34 148.7 85 84.7
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 2.1e-34 148.7 85 87.1
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.5e-34 147.9 85 84.7
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.5e-34 147.9 85 84.7
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 3.5e-34 147.9 85 87.1
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 4.6e-34 147.5 85 87.1
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 4.6e-34 147.5 85 87.1
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 6.0e-34 147.1 85 85.9
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 6.0e-34 147.1 85 85.9
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 7.9e-34 146.7 85 85.9
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.0e-33 146.4 85 85.9
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.3e-33 146.0 85 83.5
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.3e-33 146.0 85 84.7
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 1.8e-33 145.6 85 83.5
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.8e-33 145.6 85 83.5
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.8e-33 145.6 85 84.7
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.8e-33 145.6 85 85.9
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 1.8e-33 145.6 84 85.7
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.8e-33 145.6 85 84.7
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.3e-33 145.2 85 84.7
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.3e-33 145.2 85 83.5
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 2.3e-33 145.2 85 84.7
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 2.3e-33 145.2 85 84.7
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.3e-33 145.2 85 84.7
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 3.0e-33 144.8 85 84.7
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.9e-33 144.4 85 84.7
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 3.9e-33 144.4 85 83.5
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 3.9e-33 144.4 85 84.7
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 3.9e-33 144.4 85 84.7
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.9e-33 144.4 85 84.7
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 5.1e-33 144.1 85 83.5
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.1e-33 144.1 85 83.5
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.1e-33 144.1 85 83.5
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 6.7e-33 143.7 85 82.4
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 8.7e-33 143.3 85 82.4
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 8.7e-33 143.3 85 83.5
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 8.7e-33 143.3 85 81.2
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 8.7e-33 143.3 85 83.5
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 8.7e-33 143.3 85 83.5
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 8.7e-33 143.3 85 81.2
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.1e-32 142.9 85 83.5
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.1e-32 142.9 85 84.7
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.1e-32 142.9 85 81.2
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.1e-32 142.9 85 82.4
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.5e-32 142.5 85 82.4
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.5e-32 142.5 85 81.2
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.5e-32 142.5 85 81.2
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.5e-32 142.5 85 81.2
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.5e-32 142.5 85 80.0
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.5e-32 142.5 85 81.2
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 80.0
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 81.2
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 80.0
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 80.0
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 81.2
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 81.2
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 80.0
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 81.2
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 80.0
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 80.0
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 81.2
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 83.5
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 82.4
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 81.2
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.9e-32 142.1 85 82.4
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 2.5e-32 141.7 85 82.4
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 2.5e-32 141.7 85 80.0
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 2.5e-32 141.7 85 80.0
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.5e-32 141.7 85 81.2
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 2.5e-32 141.7 85 82.4
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 3.3e-32 141.4 85 81.2
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 3.3e-32 141.4 85 81.2
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 3.3e-32 141.4 85 81.2
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 4.3e-32 141.0 85 80.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 4.3e-32 141.0 85 81.2
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.3e-32 141.0 85 82.4
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 5.6e-32 140.6 85 80.0
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 7.4e-32 140.2 85 81.2
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 9.6e-32 139.8 85 81.2
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 9.6e-32 139.8 85 78.8
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 9.6e-32 139.8 85 78.8
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.3e-31 139.4 82 82.9
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.3e-31 139.4 85 78.8
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.3e-31 139.4 85 78.8
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.3e-31 139.4 85 78.8
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.6e-31 139.0 85 81.2
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.6e-31 139.0 83 83.1
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.6e-31 139.0 85 77.6
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 1.6e-31 139.0 85 81.2
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 2.1e-31 138.7 85 78.8
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 2.1e-31 138.7 85 80.0
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 2.8e-31 138.3 84 83.3
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 3.7e-31 137.9 85 80.0
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 3.7e-31 137.9 85 80.0
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 3.7e-31 137.9 85 77.6
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 6.2e-31 137.1 84 79.8
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 8.1e-31 136.7 84 82.1
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 8.1e-31 136.7 85 78.8
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.1e-30 136.3 85 81.2
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.1e-30 136.3 80 81.2
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.4e-30 136.0 84 82.1
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.4e-30 136.0 85 80.0
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.1e-30 134.8 85 75.3
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 4.0e-30 134.4 85 75.3
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 6.9e-30 133.7 85 74.1
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 6.9e-30 133.7 80 80.0
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 6.4e-28 127.1 85 71.8
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 4.2e-27 124.4 70 84.3
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 6.7e-25 117.1 85 68.2
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 8.7e-25 116.7 71 81.7
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 7.4e-24 113.6 85 64.7
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 8.2e-23 110.2 85 61.2
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.1e-22 109.8 85 62.4
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 8.4e-20 100.1 85 60.0
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.9e-16 89.0 52 78.8
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 9.7e-16 86.7 49 85.7
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 2.2e-15 85.5 77 53.2
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 3.1e-14 81.6 85 50.6
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.5e-13 79.3 50 76.0
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.8e-07 58.5 44 70.5
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 3.1e-06 55.1 38 65.8


User provided reference genes

Program Settings