Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 1.5e-305 1052.0 517 100.0
TPR.G6443 Trifolium pratense HOM05D004790 ORTHO05D005678 1.0e-213 746.9 514 73.0
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 9.8e-212 740.3 519 72.6
Glyma.12G203700 Glycine max HOM05D004790 ORTHO05D005678 6.2e-174 614.8 514 61.5
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 8.1e-174 614.4 518 59.7
VMungo1080G1693 Vigna mungo HOM05D004790 ORTHO05D005678 2.4e-173 612.8 511 60.7
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 3.1e-173 612.5 514 60.7
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 2.4e-170 602.8 511 59.9
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 1.9e-143 513.5 498 54.4
Lalb_Chr14g0366851 Lupinus albus HOM05D004790 ORTHO05D005678 3.3e-143 512.7 497 53.7
Ciclev10014904m.g Citrus clementina HOM05D004790 ORTHO05D005678 2.5e-138 496.5 527 48.6
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 7.2e-138 495.0 519 49.5
FvH4_6g26160 Fragaria vesca HOM05D004790 ORTHO05D005678 7.9e-137 491.5 534 47.2
Gohir.D04G143900 Gossypium hirsutum HOM05D004790 ORTHO05D005678 7.9e-137 491.5 520 49.8
Gorai.012G129400 Gossypium raimondii HOM05D004790 ORTHO05D005678 7.9e-137 491.5 520 49.8
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 1.3e-136 490.7 524 48.1
Psat5g271320 Pisum sativum HOM05D004790 ORTHO05D005678 3.0e-136 489.6 505 51.9
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 5.1e-136 488.8 515 49.7
Atru.chr6.3004 Acer truncatum HOM05D004790 ORTHO05D005678 8.8e-136 488.0 528 47.9
PGR042G3525 Punica granatum HOM05D004790 ORTHO05D005678 8.8e-136 488.0 525 47.0
FAN02G0059 Fragaria x ananassa HOM05D004790 ORTHO05D005678 1.1e-135 487.6 534 47.2
Thecc.02G178300 Theobroma cacao HOM05D004790 ORTHO05D005678 1.5e-135 487.3 520 49.6
Prupe.3G136400 Prunus persica HOM05D004790 ORTHO05D005678 2.5e-135 486.5 541 47.5
Duzib248G1314 Durio zibethinus HOM05D004790 ORTHO05D005678 7.4e-135 485.0 513 48.9
Gohir.A04G104200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 3.7e-134 482.6 520 49.8
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 1.4e-133 480.7 542 46.3
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 5.3e-133 478.8 520 47.9
CiPaw.03G175600 Carya illinoinensis HOM05D004790 ORTHO05D005678 2.0e-132 476.9 533 47.8
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 1.2e-129 467.6 551 45.4
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 1.2e-129 467.6 551 45.4
QL08p038483 Quercus lobata HOM05D004790 ORTHO05D005678 1.6e-129 467.2 523 46.5
Dinv23649 Davidia involucrata HOM05D004790 ORTHO05D005678 3.6e-129 466.1 539 45.8
TWI36G0090 Tripterygium wilfordii HOM05D004790 ORTHO05D005678 3.6e-129 466.1 545 46.2
Cfa014604 Carpinus fangiana HOM05D004790 ORTHO05D005678 7.9e-129 464.9 519 46.8
MELO3C013614.2 Cucumis melo HOM05D004790 ORTHO05D005678 1.8e-128 463.8 528 47.0
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 3.0e-128 463.0 518 45.4
ClCG02G017590 Citrullus lanatus HOM05D004790 ORTHO05D005678 8.8e-128 461.5 530 46.4
Manes.12G090600 Manihot esculenta HOM05D004790 ORTHO05D005678 2.6e-127 459.9 517 46.2
Actinidia09859 Actinidia chinensis HOM05D004790 ORTHO05D005678 4.4e-127 459.1 556 45.1
Eucgr.A01811 Eucalyptus grandis HOM05D004790 ORTHO05D005678 1.3e-126 457.6 533 44.8
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 4.8e-126 455.7 520 48.3
Sabra13G0113200 Salix brachista HOM05D004790 ORTHO05D005678 4.8e-126 455.7 519 45.7
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 6.3e-126 455.3 528 46.2
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 1.1e-125 454.5 516 48.1
TAR627G0452 Trochodendron aralioides HOM05D004790 ORTHO05D005678 3.1e-125 453.0 535 45.2
Oeu045846.1 Olea europaea HOM05D004790 ORTHO05D005678 1.7e-123 447.2 527 45.0
Migut.H01089 Erythranthe guttata HOM05D004790 ORTHO05D005678 5.0e-123 445.7 524 44.8
vmacro12295 Vaccinium macrocarpon HOM05D004790 ORTHO05D005678 5.0e-123 445.7 554 44.4
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 8.5e-123 444.9 545 45.9
Sabra19G0112400 Salix brachista HOM05D004790 ORTHO05D005678 1.4e-122 444.1 522 44.8
Gorai.013G075500 Gossypium raimondii HOM05D004790 ORTHO05D005678 2.5e-122 443.4 512 45.7
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 7.2e-122 441.8 535 44.9
Haze_13149 Corylus avellana HOM05D004790 ORTHO05D005678 2.1e-121 440.3 511 46.8
Sabra19G0111100 Salix brachista HOM05D004790 ORTHO05D005678 3.6e-121 439.5 519 44.5
Hma1.2p1_0213F.1_g090370 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.0e-119 433.7 554 43.0
Oeu029923.1 Olea europaea HOM05D004790 ORTHO05D005678 5.7e-119 432.2 524 44.3
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 7.4e-119 431.8 528 43.8
Cc05_g07060 Coffea canephora HOM05D004790 ORTHO05D005678 1.7e-118 430.6 523 44.6
Sed0002654 Sechium edule HOM05D004790 ORTHO05D005678 2.2e-118 430.3 535 44.3
FAN05G3153 Fragaria x ananassa HOM05D004790 ORTHO05D005678 3.1e-117 426.4 484 46.1
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 4.1e-117 426.0 526 43.9
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 5.3e-117 425.6 513 43.7
Lj1A724T21 Lonicera japonica HOM05D004790 ORTHO05D005678 2.0e-116 423.7 507 45.6
Gohir.D13G066200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 3.8e-115 419.5 513 44.2
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 1.1e-114 417.9 501 44.7
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 7.2e-114 415.2 522 44.6
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 8.0e-113 411.8 511 44.0
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 1.8e-112 410.6 516 41.7
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 2.3e-112 410.2 523 41.9
Nn1g04055 Nelumbo nucifera HOM05D004790 ORTHO05D005678 4.0e-112 409.5 549 41.3
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 6.7e-112 408.7 524 42.0
Rhsim06G0143900 Rhododendron simsii HOM05D004790 ORTHO05D005678 1.5e-111 407.5 552 43.1
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 2.6e-111 406.8 523 41.3
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 5.7e-111 405.6 523 41.3
SGA_v2.0_scaffold109G31134 Striga asiatica HOM05D004790 ORTHO05D005678 7.5e-111 405.2 534 41.0
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 1.3e-110 404.4 527 41.9
Sp7g26220 Schrenkiella parvula HOM05D004790 ORTHO05D005678 1.3e-110 404.4 515 43.1
Ah.01g015210 Amaranthus hybridus HOM05D004790 ORTHO05D005678 3.7e-110 402.9 548 40.7
Hund01104 Selenicereus undatus HOM05D004790 ORTHO05D005678 4.8e-110 402.5 553 40.1
Solyc10g008420.3 Solanum lycopersicum HOM05D004790 ORTHO05D005678 4.8e-110 402.5 529 41.6
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 6.3e-110 402.1 527 41.6
Nitab4.5_0007168g0010 Nicotiana tabacum HOM05D004790 ORTHO05D005678 1.4e-109 401.0 527 41.7
PGSC0003DMG400021668 Solanum tuberosum HOM05D004790 ORTHO05D005678 1.4e-109 401.0 527 41.4
EL10Ac9g20754 Beta vulgaris HOM05D004790 ORTHO05D005678 2.4e-109 400.2 551 40.3
unitig_26.g9948 Utricularia gibba HOM05D004790 ORTHO05D005678 3.1e-109 399.8 531 42.4
Sopen10g004250 Solanum pennellii HOM05D004790 ORTHO05D005678 4.1e-109 399.4 529 41.4
CARHR235970 Cardamine hirsuta HOM05D004790 ORTHO05D005678 5.3e-109 399.1 517 40.0
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 5.3e-109 399.1 511 43.1
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 2.0e-108 397.1 522 42.0
SalBow7G3762 Salvia bowleyana HOM05D004790 ORTHO05D005678 1.7e-107 394.0 555 40.0
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 3.8e-107 392.9 519 42.8
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 6.5e-107 392.1 516 40.3
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 6.5e-107 392.1 511 40.5
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 8.5e-107 391.7 523 42.4
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 2.5e-106 390.2 517 41.8
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 5.5e-106 389.0 517 40.2
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 2.7e-105 386.7 514 41.2
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 2.7e-105 386.7 517 40.4
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 3.6e-105 386.3 517 41.6
Sc12g0003010 Simmondsia chinensis HOM05D004790 ORTHO05D005678 4.7e-105 386.0 562 39.0
MBI19_g19847_MAGBIO Magnolia biondii HOM05D004790 ORTHO05D005678 2.0e-103 380.6 568 39.8
BcaB03g12561 Brassica carinata HOM05D004790 ORTHO05D005678 9.8e-103 378.3 520 41.0
Duzib052G0346 Durio zibethinus HOM05D004790 ORTHO05D005678 1.7e-102 377.5 510 41.8
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 4.8e-102 375.9 506 40.5
AUR62037353 Chenopodium quinoa HOM05D004790 ORTHO05D005678 2.9e-99 366.7 542 38.0
Gohir.A13G055800 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.0e-96 358.2 514 40.7
PSO541G2110 Papaver somniferum HOM05D004790 ORTHO05D005678 1.4e-96 357.8 533 37.1
PSO675G6339 Papaver somniferum HOM05D004790 ORTHO05D005678 2.0e-95 354.0 529 37.6
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 4.9e-94 349.4 555 37.5
SalBow7G1856 Salvia bowleyana HOM05D004790 ORTHO05D005678 1.1e-93 348.2 462 41.1
ECA234G1653 Erigeron canadensis HOM05D004790 ORTHO05D005678 9.2e-93 345.1 472 40.5
Zm00001eb044390 Zea mays HOM05D004790 ORTHO05D005678 3.3e-90 336.7 534 36.5
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 5.6e-90 335.9 530 39.1
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.6e-89 334.3 499 39.5
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 1.4e-85 321.2 513 36.6
Zm00001eb044450 Zea mays HOM05D004790 ORTHO05D005678 9.2e-85 318.5 523 35.6
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 1.0e-83 315.1 398 41.5
CDE02G0639 Ceratophyllum demersum HOM05D004790 ORTHO05D005678 7.0e-77 292.4 557 33.0
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 6.0e-76 289.3 493 36.5
Os10g0500600 Oryza sativa ssp. japonica HOM05D004790 ORTHO05D005678 7.3e-74 282.3 472 35.8
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.4e-71 273.5 484 36.0
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.4e-71 273.5 486 35.6
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 1.1e-69 268.5 491 32.2
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.6e-68 263.1 460 35.9
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.7e-67 261.2 460 35.7
Hma1.2p1_3039F.1_g331980 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.0e-59 233.8 518 30.3
Hma1.2p1_1201F.1_g266640 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-48 198.4 457 30.4
Hma1.2p1_3039F.1_g332000 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-48 198.4 457 30.4
Hma1.2p1_1201F.1_g266660 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.8e-47 193.0 378 34.4
HPP92_027303 Vanilla planifolia HOM05D004790 ORTHO05D005678 5.1e-43 179.9 263 38.4
Dinv26430 Davidia involucrata HOM05D004790 ORTHO05D005678 7.4e-42 176.0 307 35.2
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 8.1e-41 172.6 214 49.5
FAN05G5699 Fragaria x ananassa HOM05D004790 ORTHO05D005678 2.0e-39 167.9 136 55.1
SEGI_40185 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 4.5e-39 166.8 462 28.1
Mapoly0001s0243 Marchantia polymorpha HOM05D004790 ORTHO05D005678 2.1e-36 157.9 532 26.3
Pp3c8_24840 Physcomitrium patens HOM05D004790 ORTHO05D005678 2.7e-36 157.5 539 26.0
Pp3c23_21860 Physcomitrium patens HOM05D004790 ORTHO05D005678 8.7e-35 152.5 527 25.2
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 1.9e-34 151.4 407 27.3
SMO111G0050 Selaginella moellendorffii HOM05D004790 ORTHO05D005678 2.0e-31 141.4 431 29.0
Prupe.3G136600 Prunus persica HOM05D004790 ORTHO05D005678 5.8e-31 139.8 144 50.7
TPR.G11082 Trifolium pratense HOM05D004790 ORTHO05D005678 8.4e-30 136.0 482 26.1
AUR62042487 Chenopodium quinoa HOM05D004790 ORTHO05D005678 5.5e-29 133.3 164 42.1
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 4.1e-24 117.1 417 24.7
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 1.0e-19 102.4 497 21.3
Pp3c20_1230 Physcomitrium patens HOM05D004790 ORTHO05D005678 4.1e-16 90.5 380 23.4
Sabra13G0109400 Salix brachista HOM05D004790 ORTHO05D005678 1.3e-14 85.5 73 47.9
Hma1.2p1_0002F.1_g002210 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.0e-14 83.6 296 27.7
Sabra13G0113000 Salix brachista HOM05D004790 ORTHO05D005678 1.0e-11 75.9 56 55.4
GSVIVG01029526001 Vitis vinifera HOM05D004790 ORTHO05D005678 1.4e-11 75.5 73 45.2
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 3.9e-11 73.9 83 39.8
Sabra13G0109000 Salix brachista HOM05D000001 ORTHO05D000424 5.1e-11 73.6 60 48.3
Dinv07568 Davidia involucrata HOM05D032653 ORTHO05D182718 2.8e-09 67.8 208 26.4
Dinv17313 Davidia involucrata HOM05D032653 ORTHO05D185244 3.7e-09 67.4 208 26.4
FAN05G5117 Fragaria x ananassa HOM05D000001 ORTHO05D000424 8.2e-09 66.2 57 47.4
Hma1.2p1_0002F.1_g002220 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.5e-07 62.0 55 47.3
AagrBONN_evm.TU.Sc2ySwM_228.2505 Anthoceros agrestis HOM05D004790 ORTHO05D005678 2.6e-07 61.2 151 28.5
AagrBONN_evm.TU.Sc2ySwM_228.2348 Anthoceros agrestis HOM05D004790 ORTHO05D007542 7.7e-07 59.7 60 40.0
Dinv07569 Davidia involucrata HOM05D032653 ORTHO05D005678 3.8e-06 57.4 84 34.5


User provided reference genes

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