Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 4.3e-175 617.8 303 100.0
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 2.5e-151 538.9 338 81.1
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.0e-147 526.9 329 81.5
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 3.6e-137 491.9 333 72.7
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 3.3e-135 485.3 329 73.6
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.9e-130 469.5 329 70.2
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.7e-129 465.7 333 70.0
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 1.5e-127 459.9 333 70.0
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 3.3e-127 458.8 335 69.3
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 5.2e-112 408.3 330 61.2
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 5.2e-112 408.3 332 61.4
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 8.8e-112 407.5 332 62.0
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.2e-111 407.1 328 62.5
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 3.3e-111 405.6 334 61.4
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 9.7e-111 404.1 330 61.8
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 3.7e-110 402.1 331 61.0
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.7e-110 402.1 331 61.0
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 4.8e-110 401.7 337 61.7
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.1e-109 400.6 325 60.9
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.4e-109 400.2 344 59.6
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.4e-109 400.2 330 61.5
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.4e-109 400.2 337 59.3
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 2.0e-108 396.4 336 59.5
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 5.9e-108 394.8 341 58.9
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.2e-107 392.9 333 60.1
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.5e-106 389.4 331 57.7
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 2.5e-106 389.4 332 58.4
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.0e-104 382.5 331 57.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.2e-104 381.7 332 57.8
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 5.2e-104 381.7 332 57.8
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.2e-103 380.6 332 57.8
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.5e-103 380.2 338 58.0
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 3.4e-103 379.0 337 58.8
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 4.4e-103 378.6 321 58.3
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 4.4e-103 378.6 330 58.2
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 5.7e-103 378.3 331 58.9
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 7.5e-103 377.9 339 57.8
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 1.3e-102 377.1 325 58.8
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.7e-102 376.7 333 58.0
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 2.8e-102 375.9 337 58.2
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 2.8e-102 375.9 337 58.2
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 3.7e-102 375.6 337 58.5
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.7e-102 375.6 325 57.5
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 6.3e-102 374.8 337 58.2
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 6.3e-102 374.8 337 58.2
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.4e-101 373.6 326 56.1
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 1.8e-101 373.2 330 57.3
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 3.1e-101 372.5 332 57.8
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 5.4e-101 371.7 360 54.7
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 9.1e-101 370.9 367 53.4
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 9.1e-101 370.9 328 57.0
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 2.0e-100 369.8 332 59.0
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 7.7e-100 367.9 337 55.2
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.3e-99 367.1 334 57.5
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.3e-99 367.1 333 58.0
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 2.9e-99 365.9 330 57.6
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 3.8e-99 365.5 332 56.6
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 5.0e-99 365.2 333 56.5
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 6.5e-99 364.8 330 57.0
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 8.6e-99 364.4 334 55.7
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 1.1e-98 364.0 313 57.8
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.5e-98 363.6 336 56.0
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.9e-98 363.2 334 57.8
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 3.2e-98 362.5 332 54.8
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 9.5e-98 360.9 342 55.6
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.2e-97 360.5 334 56.3
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 2.8e-97 359.4 337 55.5
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.0e-96 357.5 333 56.2
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 1.4e-96 357.1 263 66.2
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.2e-95 354.0 369 50.7
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 6.3e-94 348.2 330 54.8
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.9e-90 336.7 297 58.6
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 4.3e-90 335.5 335 51.6
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 7.3e-90 334.7 300 59.0
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.2e-89 334.0 329 50.8
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.6e-89 333.6 326 53.4
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.1e-89 333.2 336 51.2
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.8e-89 332.8 298 58.7
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 6.8e-88 328.2 334 51.5
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.7e-86 323.6 293 58.7
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 5.4e-85 318.5 398 44.7
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 7.0e-85 318.2 328 52.4
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 3.9e-83 312.4 335 49.3
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 6.6e-83 311.6 332 50.6
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 6.8e-80 301.6 477 39.6
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 2.9e-78 296.2 262 57.3
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.9e-77 293.5 265 56.2
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 5.2e-72 275.4 264 52.7
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 4.9e-70 268.9 277 53.1
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 2.1e-68 263.5 231 55.8
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.1e-66 257.7 242 52.9
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 7.3e-66 255.0 320 45.9
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 3.6e-65 252.7 236 53.0
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 1.2e-63 247.7 349 43.6
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 3.4e-63 246.1 318 40.6
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.2e-62 243.4 308 48.1
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 2.3e-59 233.4 321 40.2
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.5e-58 230.7 141 73.8
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.1e-50 204.5 231 44.6
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 5.6e-50 202.2 329 38.3
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 4.9e-46 189.1 141 61.7
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 9.3e-45 184.9 104 85.6
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.3e-35 153.7 356 30.6
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 8.7e-35 151.8 139 53.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.9e-27 126.3 78 70.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.5e-26 123.6 104 60.6
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.8e-19 100.9 68 76.5
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.2e-13 79.7 100 44.0
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.4e-11 74.7 47 66.0
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.4e-11 74.7 51 66.7
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 7.4e-10 68.9 58 67.2
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 8.5e-06 55.5 47 46.8


User provided reference genes

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