Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01351_v3 Cicer arietinum L. HOM05D000723 ORTHO05D034599 1.2e-61 239.6 118 100.0
Ca_31101_v3 Cicer arietinum L. HOM05D000723 ORTHO05D034599 5.7e-59 230.7 113 100.0
Medtr2g096330 Medicago truncatula HOM05D000723 ORTHO05D001760 8.6e-39 163.7 119 73.9
Psat5g282600 Pisum sativum HOM05D000723 ORTHO05D001760 2.8e-37 158.7 116 72.4
VMungo1080G1615 Vigna mungo HOM05D000723 ORTHO05D001760 4.4e-35 151.4 128 65.6
TPR.G34264 Trifolium pratense HOM05D000723 ORTHO05D001760 1.7e-34 149.4 96 80.2
Phvul.L002143 Phaseolus vulgaris HOM05D000723 ORTHO05D001760 7.8e-32 140.6 128 62.5
Glyma.13G332567 Glycine max HOM05D000723 ORTHO05D034599 1.7e-31 139.4 126 62.7
Lj3g0025616 Lotus japonicus HOM05D000723 ORTHO05D001760 2.3e-31 139.0 122 60.7
Glyma.15G041600 Glycine max HOM05D000723 ORTHO05D001760 1.1e-30 136.7 129 60.5
Lalb_Chr14g0374971 Lupinus albus HOM05D000723 ORTHO05D001760 3.2e-25 118.6 130 56.2
arahy.Tifrunner.gnm1.ann1.A3QRPX Arachis hypogaea HOM05D000723 ORTHO05D001760 1.4e-20 103.2 142 52.8
arahy.Tifrunner.gnm1.ann1.4NAC8Z Arachis hypogaea HOM05D000723 ORTHO05D001760 5.3e-20 101.3 141 51.8
Thecc.09G328600 Theobroma cacao HOM05D000723 ORTHO05D001760 6.9e-20 100.9 127 45.7
Haze_24024 Corylus avellana HOM05D000723 ORTHO05D001760 1.5e-19 99.8 127 49.6
Cfa011441 Carpinus fangiana HOM05D000723 ORTHO05D001760 2.0e-19 99.4 127 49.6
COL.COLO4_18438 Corchorus olitorius HOM05D000723 ORTHO05D001760 9.9e-19 97.1 131 44.3
Dinv26275 Davidia involucrata HOM05D000723 ORTHO05D001760 1.7e-18 96.3 129 45.0
CiPaw.13G100000 Carya illinoinensis HOM05D000723 ORTHO05D001760 4.9e-18 94.7 128 48.4
CSS0006630 Camellia sinensis var. sinensis HOM05D000723 ORTHO05D001760 8.4e-18 94.0 128 44.5
Ciclev10028220m.g Citrus clementina HOM05D000723 ORTHO05D001760 1.1e-17 93.6 127 42.5
Gohir.D03G130200 Gossypium hirsutum HOM05D000723 ORTHO05D001760 1.4e-17 93.2 114 46.5
Gorai.003G136900 Gossypium raimondii HOM05D000723 ORTHO05D001760 1.4e-17 93.2 114 46.5
Lj1A161T64 Lonicera japonica HOM05D000723 ORTHO05D001760 1.9e-17 92.8 122 50.0
Gohir.A03G038200 Gossypium hirsutum HOM05D000723 ORTHO05D001760 2.4e-17 92.4 114 46.5
QL01p033511 Quercus lobata HOM05D000723 ORTHO05D001760 2.4e-17 92.4 128 43.0
FAN21G2669 Fragaria x ananassa HOM05D000723 ORTHO05D001760 3.2e-17 92.0 130 47.7
Duzib168G0120 Durio zibethinus HOM05D000723 ORTHO05D001760 4.2e-17 91.7 127 44.1
FAN25G0280 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.6e-16 89.7 130 46.9
RcHm_v2.0_Chr5g0062711 Rosa chinensis HOM05D000723 ORTHO05D001760 1.6e-16 89.7 129 45.7
Cpa.g.sc252.19 Carica papaya HOM05D000723 ORTHO05D001760 3.5e-16 88.6 127 43.3
GSVIVG01025042001 Vitis vinifera HOM05D000723 ORTHO05D001760 1.0e-15 87.0 130 45.4
Actinidia03778 Actinidia chinensis HOM05D000723 ORTHO05D001760 2.3e-15 85.9 127 40.9
PGR119G0510 Punica granatum HOM05D000723 ORTHO05D001760 5.1e-15 84.7 103 49.5
FvH4_3g34860 Fragaria vesca HOM05D000723 ORTHO05D001760 6.7e-15 84.3 130 44.6
FAN11G1931 Fragaria x ananassa HOM05D000723 ORTHO05D001760 6.7e-15 84.3 130 44.6
Peaxi162Scf00406g00011 Petunia axillaris HOM05D000723 ORTHO05D001760 3.3e-14 82.0 114 47.4
FAN16G0126 Fragaria x ananassa HOM05D000723 ORTHO05D001760 4.3e-14 81.6 130 44.6
Hma1.2p1_0035F.1_g022030 Hydrangea macrophylla HOM05D000723 ORTHO05D001760 1.3e-13 80.1 76 59.2
Potri.001G234900 Populus trichocarpa HOM05D000723 ORTHO05D001760 2.1e-13 79.3 130 42.3
Manes.11G135000 Manihot esculenta HOM05D000723 ORTHO05D001760 2.8e-13 79.0 116 44.8
MD03G1100600 Malus domestica HOM05D000723 ORTHO05D001760 3.7e-13 78.6 133 41.4
Prupe.6G085600 Prunus persica HOM05D000723 ORTHO05D001760 3.7e-13 78.6 126 42.9
Rhsim01G0224400 Rhododendron simsii HOM05D000723 ORTHO05D001760 4.8e-13 78.2 87 50.6
PSO339G4845 Papaver somniferum HOM05D000723 ORTHO05D001760 1.4e-12 76.6 81 58.0
vmacro14503 Vaccinium macrocarpon HOM05D000723 ORTHO05D001760 1.4e-12 76.6 87 49.4
Aqoxy4G03033 Aquilegia oxysepala HOM05D000723 ORTHO05D001760 1.8e-12 76.3 110 41.8
Carub.0008s2040 Capsella rubella HOM05D000723 ORTHO05D001760 1.8e-12 76.3 116 48.3
THA.LOC104810798 Tarenaya hassleriana HOM05D000723 ORTHO05D001760 5.3e-12 74.7 103 48.5
AL8G36270 Arabidopsis lyrata HOM05D000723 ORTHO05D001760 6.9e-12 74.3 116 43.1
CARHR273330 Cardamine hirsuta HOM05D000723 ORTHO05D001760 6.9e-12 74.3 121 40.5
Ah.08g214860 Amaranthus hybridus HOM05D000723 ORTHO05D001760 1.2e-11 73.6 123 43.9
Sc21g0005430 Simmondsia chinensis HOM05D000723 ORTHO05D001760 1.2e-11 73.6 67 58.2
Thhalv10013308m.g Eutrema salsugineum HOM05D000723 ORTHO05D001760 1.5e-11 73.2 110 42.7
TWI79G0803 Tripterygium wilfordii HOM05D000723 ORTHO05D001760 1.5e-11 73.2 129 39.5
Atru.chr3.3811 Acer truncatum HOM05D000723 ORTHO05D001760 4.5e-11 71.6 75 58.7
EL10Ac7g15958 Beta vulgaris HOM05D000723 ORTHO05D001760 7.6e-11 70.9 122 41.8
Eucgr.J02077 Eucalyptus grandis HOM05D000723 ORTHO05D001760 7.6e-11 70.9 104 43.3
CAN.G820.10 Capsicum annuum HOM05D000723 ORTHO05D001760 9.9e-11 70.5 59 66.1
Sabra16G0141100 Salix brachista HOM05D000723 ORTHO05D001760 9.9e-11 70.5 128 42.2
Hund05009 Selenicereus undatus HOM05D000723 ORTHO05D001760 2.2e-10 69.3 122 41.0
TAR633G0699 Trochodendron aralioides HOM05D000723 ORTHO05D001760 2.2e-10 69.3 127 37.0
DCAR_015598 Daucus carota HOM05D000723 ORTHO05D001760 4.9e-10 68.2 58 63.8
AT5G59750 Arabidopsis thaliana HOM05D000723 ORTHO05D001760 6.4e-10 67.8 127 40.2
CANSAT54G2430 Cannabis sativa HOM05D000723 ORTHO05D001760 6.4e-10 67.8 92 46.7
PSO206G0040 Papaver somniferum HOM05D000723 ORTHO05D001760 6.4e-10 67.8 78 55.1
Sp6g21420 Schrenkiella parvula HOM05D000723 ORTHO05D001760 1.9e-09 66.2 104 43.3
AUR62001843 Chenopodium quinoa HOM05D000723 ORTHO05D001760 2.4e-09 65.9 68 54.4
PGSC0003DMG400015538 Solanum tuberosum HOM05D000723 ORTHO05D001760 3.2e-09 65.5 89 44.9
Nn2g12878 Nelumbo nucifera HOM05D000723 ORTHO05D001760 4.2e-09 65.1 120 37.5
Solyc11g073160.3 Solanum lycopersicum HOM05D000723 ORTHO05D001760 7.1e-09 64.3 49 69.4
Oeu062317.1 Olea europaea HOM05D000723 ORTHO05D001760 9.3e-09 63.9 41 80.5
Hma1.2p1_0035F.1_g021990 Hydrangea macrophylla HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 73.8
Cc01_g12240 Coffea canephora HOM05D000723 ORTHO05D001760 1.6e-08 63.2 41 75.6
A02p06900 Brassica napus HOM05D000723 ORTHO05D001760 2.7e-08 62.4 52 61.5
C02p12200 Brassica napus HOM05D000723 ORTHO05D001760 3.5e-08 62.0 41 73.2
BolC2t07322H Brassica oleracea HOM05D000723 ORTHO05D001760 3.5e-08 62.0 41 73.2
Sopen11g030800 Solanum pennellii HOM05D000723 ORTHO05D001760 3.5e-08 62.0 47 70.2
BraA02t05771Z Brassica rapa HOM05D000723 ORTHO05D001760 6.0e-08 61.2 97 40.2
Nitab4.5_0003179g0100 Nicotiana tabacum HOM05D000723 ORTHO05D001760 1.0e-07 60.5 63 52.4
MBI14_g02807_MAGBIO Magnolia biondii HOM05D000723 ORTHO05D001760 2.3e-07 59.3 72 44.4
Nitab4.5_0000610g0240 Nicotiana tabacum HOM05D000723 ORTHO05D001760 2.3e-07 59.3 32 81.2
MSTRG.18598 Avicennia marina HOM05D000723 ORTHO05D001760 3.0e-07 58.9 92 43.5
SEGI_39653 Sequoiadendron giganteum HOM05D000723 ORTHO05D001760 3.0e-07 58.9 54 57.4
HanXRQChr01g0009921 Helianthus annuus HOM05D000723 ORTHO05D001760 6.7e-07 57.8 74 41.9
ATR0033G041 Amborella trichopoda HOM05D000723 ORTHO05D001760 8.7e-07 57.4 78 41.0
Migut.D02136 Erythranthe guttata HOM05D000723 ORTHO05D001760 8.7e-07 57.4 112 39.3
Lsat_1_v5_gn_5_166481 Lactuca sativa HOM05D000723 ORTHO05D001760 8.7e-07 57.4 41 65.9
SalBow3G1370 Salvia bowleyana HOM05D000723 ORTHO05D001760 1.1e-06 57.0 55 61.8
SGA_v2.0_scaffold134G34715 Striga asiatica HOM05D000723 ORTHO05D001760 1.1e-06 57.0 54 61.1
SalBow1G2017 Salvia bowleyana HOM05D000723 ORTHO05D001760 1.5e-06 56.6 41 73.2
ECA248G2818 Erigeron canadensis HOM05D000723 ORTHO05D001760 1.9e-06 56.2 131 31.3
Os05g0460600 Oryza sativa ssp. japonica HOM05D000723 ORTHO05D001760 2.5e-06 55.8 126 35.7
Zm00001eb351390 Zea mays HOM05D000723 ORTHO05D001760 4.3e-06 55.1 126 34.1


User provided reference genes

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