Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 5.9e-173 610.9 338 100.0
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 1.3e-92 344.0 353 62.3
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 6.9e-81 305.1 356 61.2
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 1.6e-74 283.9 361 56.8
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 1.3e-66 257.7 331 54.7
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 2.0e-56 223.8 379 45.9
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 5.0e-55 219.2 405 43.5
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 1.4e-54 217.6 406 44.3
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 6.9e-41 172.2 332 44.6
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 5.5e-38 162.5 165 58.8
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 7.2e-38 162.2 434 37.8
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 6.1e-37 159.1 332 41.9
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 2.0e-35 154.1 443 35.0
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 1.6e-29 134.4 316 38.3
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 3.6e-29 133.3 371 34.0
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 4.7e-29 132.9 385 35.1
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 1.0e-28 131.7 349 37.5
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 3.0e-28 130.2 371 35.0
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 2.6e-27 127.1 305 39.7
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 5.7e-27 125.9 360 36.4
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 9.7e-27 125.2 369 34.1
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 2.8e-26 123.6 220 43.6
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 2.8e-26 123.6 430 33.0
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 4.8e-26 122.9 348 33.6
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.1e-25 121.7 259 40.5
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 1.1e-25 121.7 183 48.1
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 1.8e-25 120.9 372 34.1
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 5.3e-25 119.4 379 35.1
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 7.0e-25 119.0 346 34.1
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 1.2e-24 118.2 442 32.8
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.0e-24 117.5 177 45.8
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 2.7e-24 117.1 341 33.7
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 4.5e-24 116.3 301 37.9
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 7.7e-24 115.5 349 35.2
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 1.0e-23 115.2 287 36.9
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 1.3e-23 114.8 206 42.2
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 3.8e-23 113.2 344 34.9
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 5.0e-23 112.8 304 36.5
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 6.5e-23 112.5 283 35.3
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 2.5e-22 110.5 110 60.9
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 3.2e-22 110.2 317 34.4
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 7.2e-22 109.0 337 34.1
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 9.4e-22 108.6 314 35.4
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 2.1e-21 107.5 372 32.5
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 3.6e-21 106.7 307 35.5
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 3.6e-21 106.7 110 56.4
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 6.1e-21 105.9 143 50.3
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 6.1e-21 105.9 256 38.7
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 1.4e-20 104.8 413 31.7
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.4e-20 104.8 253 37.5
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 6.8e-20 102.4 376 35.6
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.5e-19 101.3 184 45.1
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 4.4e-19 99.8 168 44.0
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 7.5e-19 99.0 337 33.8
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 1.7e-18 97.8 163 43.6
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 2.8e-18 97.1 366 35.2
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 4.8e-18 96.3 311 31.8
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 4.8e-18 96.3 318 32.1
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 3.1e-17 93.6 246 36.6
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 3.1e-17 93.6 300 34.3
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 5.4e-17 92.8 194 40.7
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 7.0e-17 92.4 378 32.0
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 7.0e-17 92.4 378 33.1
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 2.7e-16 90.5 356 31.5
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 3.5e-16 90.1 152 42.8
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 3.5e-16 90.1 125 48.8
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 3.8e-15 86.7 189 40.2
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 5.0e-15 86.3 111 48.6
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 5.0e-15 86.3 111 48.6
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.5e-14 84.7 243 31.7
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.9e-14 84.3 306 33.7
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 4.2e-14 83.2 166 40.4
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 9.5e-14 82.0 179 35.2
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 8.0e-13 79.0 242 32.6
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 1.8e-12 77.8 175 34.9
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 1.8e-12 77.8 313 29.7
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 2.3e-12 77.4 196 33.2
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 2.3e-12 77.4 178 33.7
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 2.3e-12 77.4 301 29.2
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 3.0e-12 77.0 331 30.5
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 4.0e-12 76.6 365 27.9
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 5.2e-12 76.3 143 42.7
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 5.2e-12 76.3 143 42.7
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 6.8e-12 75.9 196 33.2
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 1.5e-11 74.7 388 28.1
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 1.5e-11 74.7 185 33.0
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 3.4e-11 73.6 196 32.1
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 3.4e-11 73.6 196 32.1
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 3.4e-11 73.6 184 33.2
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 3.4e-11 73.6 124 44.4
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 1.7e-10 71.2 169 33.7
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 8.3e-10 68.9 53 64.2
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 1.4e-09 68.2 198 34.3
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 4.1e-09 66.6 338 28.4
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 5.4e-09 66.2 135 38.5
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 9.2e-09 65.5 277 31.8
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.6e-08 64.7 245 32.2
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 2.7e-08 63.9 374 25.1
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 5.9e-08 62.8 392 25.8
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 1.7e-07 61.2 56 57.1
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 3.8e-07 60.1 125 40.0
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 6.6e-07 59.3 347 27.4
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 6.6e-07 59.3 114 43.0
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 1.1e-06 58.5 307 28.3
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 1.5e-06 58.2 68 48.5
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 4.3e-06 56.6 340 26.2
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 4.3e-06 56.6 340 26.2
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 5.6e-06 56.2 376 24.5
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 7.3e-06 55.8 366 25.7
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 9.5e-06 55.5 244 30.3


User provided reference genes

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