Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 1.2e-223 779.6 420 100.0
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 3.3e-93 346.3 561 42.6
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 2.9e-89 333.2 568 44.2
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 8.0e-87 325.1 459 50.3
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 8.8e-86 321.6 569 43.1
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 1.0e-73 281.6 449 43.2
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 2.5e-72 276.9 440 43.4
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 2.9e-52 210.3 463 37.6
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 4.9e-36 156.4 407 34.6
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 2.4e-35 154.1 345 37.4
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 9.6e-32 142.1 298 44.6
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 9.9e-29 132.1 174 47.7
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 1.7e-28 131.3 222 42.3
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 1.0e-25 122.1 314 36.0
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 1.1e-24 118.6 221 42.1
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 3.6e-23 113.6 223 41.7
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 5.3e-22 109.8 199 44.7
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 6.9e-22 109.4 505 26.5
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 2.6e-21 107.5 419 33.2
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 4.9e-20 103.2 199 43.2
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 3.2e-19 100.5 506 26.9
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 3.0e-17 94.0 192 41.1
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 3.0e-17 94.0 375 29.1
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 2.8e-15 87.4 327 28.7
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 6.2e-15 86.3 474 25.1
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 1.1e-14 85.5 223 31.4
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 1.4e-14 85.1 288 28.8
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 3.1e-14 84.0 223 30.9
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 4.9e-12 76.6 242 29.8
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 1.1e-11 75.5 166 33.7
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 1.1e-11 75.5 251 30.7
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 1.8e-09 68.2 438 24.4
Manes.11G119400 Manihot esculenta HOM05D008213 ORTHO05D009787 5.1e-09 66.6 423 24.1
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 1.1e-08 65.5 197 31.5
Aqoxy5G00188 Aquilegia oxysepala HOM05D008213 ORTHO05D009787 1.5e-08 65.1 187 29.9
Cpa.g.sc71.7 Carica papaya HOM05D008213 ORTHO05D009787 1.6e-07 61.6 140 30.0
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 1.1e-06 58.9 455 22.2
TAR362G1061 Trochodendron aralioides HOM05D008213 ORTHO05D009787 1.8e-06 58.2 409 26.7


User provided reference genes

Program Settings