Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 9.9e-165 583.6 334 100.0
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.4e-142 510.0 334 88.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 2.7e-130 469.2 334 84.1
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 5.9e-125 451.4 325 81.8
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 7.7e-125 451.1 328 78.4
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 2.7e-122 442.6 342 77.5
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 1.8e-121 439.9 326 77.3
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 3.7e-119 432.2 341 75.7
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.8e-118 429.9 359 69.6
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 7.2e-107 391.3 323 71.8
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 7.2e-107 391.3 342 71.1
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 5.2e-105 385.2 330 66.1
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 6.7e-105 384.8 319 69.6
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 2.6e-104 382.9 325 68.9
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 4.4e-104 382.1 331 68.6
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 7.5e-104 381.3 326 69.3
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.3e-103 380.6 322 68.6
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.7e-103 380.2 329 69.0
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 4.8e-103 378.6 326 68.1
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.1e-102 377.5 327 66.7
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.1e-102 377.5 334 67.1
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 7.0e-102 374.8 324 69.4
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 3.5e-101 372.5 323 68.7
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 7.7e-101 371.3 327 68.2
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 1.3e-100 370.5 322 68.3
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.7e-100 370.2 323 69.7
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.2e-100 369.8 322 68.6
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.2e-100 369.8 322 64.6
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 3.8e-100 369.0 329 68.1
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 8.5e-100 367.9 322 62.4
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.1e-99 367.5 320 67.8
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.5e-99 367.1 322 68.0
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 7.2e-99 364.8 322 68.0
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.6e-98 363.6 326 65.0
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 8.0e-98 361.3 330 63.0
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 8.0e-98 361.3 334 64.1
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.0e-97 360.9 325 66.2
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 2.6e-96 356.3 321 67.3
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.6e-96 356.3 321 66.7
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.4e-94 350.5 317 65.9
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 2.4e-94 349.7 323 65.0
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 9.1e-94 347.8 330 66.1
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 2.0e-93 346.7 347 57.9
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 4.5e-93 345.5 347 58.2
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 7.7e-93 344.7 326 63.5
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 7.7e-93 344.7 326 63.5
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.3e-92 344.0 325 64.3
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 6.5e-92 341.7 323 64.1
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 8.5e-92 341.3 330 61.2
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.5e-91 340.5 328 63.4
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 2.5e-91 339.7 319 64.3
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 5.5e-91 338.6 326 63.5
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 7.2e-91 338.2 324 64.2
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 1.2e-90 337.4 328 60.7
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.6e-90 337.0 325 63.1
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.1e-90 336.7 325 63.4
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 4.7e-90 335.5 323 63.2
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 6.1e-90 335.1 331 62.8
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.4e-89 334.0 325 60.9
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 5.2e-89 332.0 326 62.3
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 6.8e-89 331.6 321 62.9
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 6.8e-89 331.6 316 64.9
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 8.8e-89 331.3 324 63.6
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.2e-88 330.9 324 63.0
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 2.0e-88 330.1 321 62.9
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 2.6e-88 329.7 325 60.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 7.5e-88 328.2 328 63.4
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 9.8e-88 327.8 321 62.3
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 9.8e-88 327.8 325 60.6
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 1.7e-87 327.0 331 61.0
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 2.2e-87 326.6 320 64.1
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 2.2e-87 326.6 208 78.4
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.2e-87 326.6 342 50.6
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 6.3e-87 325.1 326 62.3
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.1e-86 322.8 331 62.5
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 4.1e-86 322.4 324 59.9
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 2.0e-85 320.1 322 59.3
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 3.5e-85 319.3 324 60.8
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.0e-84 317.8 324 61.4
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 5.6e-83 312.0 327 60.2
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.1e-82 310.1 325 60.0
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 4.0e-81 305.8 325 52.9
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 2.6e-80 303.1 318 61.3
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 4.4e-80 302.4 322 58.7
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.7e-79 300.4 318 61.3
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 6.4e-79 298.5 318 60.7
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 2.4e-78 296.6 290 65.2
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 4.6e-77 292.4 320 57.5
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 1.5e-75 287.3 324 58.6
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 1.5e-75 287.3 324 58.6
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 2.5e-75 286.6 324 58.3
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 6.8e-73 278.5 336 53.0
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 4.9e-71 272.3 324 54.9
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 4.6e-69 265.8 282 62.1
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 7.8e-69 265.0 319 44.5
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.8e-65 253.8 225 54.7
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 8.9e-65 251.5 311 55.3
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 8.3e-63 245.0 325 53.2
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.2e-62 243.0 202 56.4
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 7.1e-62 241.9 167 65.3
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.5e-61 239.6 196 57.7
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.5e-61 239.6 328 51.8
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 6.6e-60 235.3 173 62.4
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.6e-58 230.7 253 45.8
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.7e-58 229.2 172 61.6
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 6.8e-57 225.3 320 45.6
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 1.3e-55 221.1 170 61.2
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.1e-54 216.1 167 59.3
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 3.1e-49 199.9 191 50.8
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 4.4e-48 196.1 169 54.4
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.3e-44 184.5 167 53.9
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 8.4e-39 165.2 167 48.5
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.2e-37 161.4 187 47.6
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 4.8e-34 149.4 210 56.2
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 4.6e-29 132.9 251 33.5
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 7.9e-29 132.1 346 37.3
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.3e-25 119.4 111 55.9
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 6.9e-25 119.0 108 57.4
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 2.2e-23 114.0 80 70.0
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 9.3e-22 108.6 169 35.5
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 9.3e-22 108.6 347 28.5
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 4.6e-21 106.3 125 47.2
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 1.8e-20 104.4 233 46.4
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 8.2e-18 95.5 70 67.1
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 6.9e-17 92.4 89 52.8
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 9.3e-14 82.0 65 61.5
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 3.3e-11 73.6 48 68.8
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 4.8e-10 69.7 125 32.8
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 4.8e-10 69.7 154 37.0
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.1e-09 66.6 58 58.6
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.9e-07 60.5 44 68.2
Rhsim05G0171500 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.1e-06 58.5 45 62.2
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 5.5e-06 56.2 48 58.3


User provided reference genes

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