Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01254_v3 Cicer arietinum L. HOM05D006244 ORTHO05D007401 2.6e-22 107.8 54 100.0
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 3.4e-14 80.9 59 71.2
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 5.7e-14 80.1 59 71.2
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 2.2e-13 78.2 59 67.8
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 1.9e-09 65.1 68 55.9
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 5.6e-09 63.5 64 54.7
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 5.6e-09 63.5 67 56.7
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 7.3e-09 63.2 57 61.4
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.0e-07 59.3 57 59.6
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 3.1e-07 57.8 57 56.1
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 4.0e-07 57.4 53 58.5
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 5.2e-07 57.0 70 47.1
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 6.8e-07 56.6 74 45.9
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 6.8e-07 56.6 57 57.9
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 6.8e-07 56.6 70 45.7
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 8.9e-07 56.2 53 58.5
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.2e-06 55.8 57 56.1
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.5e-06 55.5 75 44.0
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.5e-06 55.5 57 56.1
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 2.6e-06 54.7 62 50.0
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 3.4e-06 54.3 57 54.4
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 4.4e-06 53.9 65 47.7
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 7.5e-06 53.1 59 45.8
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 7.5e-06 53.1 57 56.1
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 7.5e-06 53.1 57 56.1
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 9.8e-06 52.8 57 54.4
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 9.8e-06 52.8 67 46.3


User provided reference genes

Program Settings