Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.1e-141 506.9 250 100.0
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 3.0e-96 355.9 239 73.6
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 2.0e-92 343.2 251 72.5
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.3e-91 340.5 233 75.5
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.1e-74 284.3 259 61.0
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 1.0e-72 277.7 253 59.7
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 1.3e-70 270.8 243 58.8
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.2e-65 254.2 249 53.8
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.8e-56 223.8 261 46.7
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 3.1e-56 223.0 261 44.8
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.5e-55 220.7 274 44.9
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 5.8e-55 218.8 261 46.4
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 1.3e-54 217.6 273 45.1
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 3.7e-54 216.1 258 47.3
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.9e-53 213.8 261 44.8
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 2.4e-53 213.4 261 44.8
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 4.1e-53 212.6 262 48.1
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 5.4e-53 212.2 242 46.7
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 7.1e-53 211.8 262 46.2
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 3.9e-51 206.1 261 43.3
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 3.9e-51 206.1 263 45.2
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 1.5e-50 204.1 273 41.4
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 7.3e-50 201.8 256 43.4
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.6e-49 199.5 249 43.4
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 4.7e-49 199.1 263 43.7
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 8.1e-49 198.4 276 43.5
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.8e-48 197.2 274 41.2
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 2.4e-48 196.8 212 46.2
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 2.4e-48 196.8 271 43.9
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.4e-48 196.8 236 45.8
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 4.0e-48 196.1 265 48.7
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 8.9e-48 194.9 293 38.6
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.0e-47 193.7 273 42.1
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 2.6e-47 193.4 266 48.1
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 7.6e-47 191.8 253 40.7
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 1.3e-46 191.0 260 46.2
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.3e-46 191.0 270 40.4
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.2e-46 190.3 233 48.1
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 8.4e-46 188.3 268 42.9
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.9e-45 187.2 286 39.2
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 5.4e-45 185.7 253 42.7
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 5.4e-45 185.7 284 39.8
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 9.3e-45 184.9 249 45.4
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 9.3e-45 184.9 249 45.4
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 2.7e-44 183.3 240 46.7
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 6.0e-44 182.2 266 43.6
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 1.3e-43 181.0 264 39.0
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.3e-43 180.3 262 41.6
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.9e-42 177.2 283 37.5
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 3.3e-42 176.4 183 47.5
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 3.3e-42 176.4 251 40.6
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 2.8e-41 173.3 251 39.8
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 6.2e-41 172.2 192 44.3
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 8.1e-41 171.8 267 40.8
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 1.1e-40 171.4 233 41.6
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 1.4e-40 171.0 173 46.8
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 5.3e-40 169.1 270 38.5
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 6.9e-40 168.7 274 35.4
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 9.0e-40 168.3 230 44.3
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.2e-39 167.9 226 41.2
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.5e-39 167.5 260 38.5
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.6e-39 166.8 211 43.6
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 4.4e-39 166.0 256 38.7
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 4.4e-39 166.0 238 41.2
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 5.8e-39 165.6 257 37.7
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 5.8e-39 165.6 174 49.4
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.7e-38 164.1 237 41.8
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.2e-38 163.7 257 40.5
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.2e-38 163.7 257 40.5
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 5.4e-37 159.1 252 38.1
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 7.1e-37 158.7 263 38.0
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 7.1e-37 158.7 266 37.2
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 9.3e-37 158.3 272 34.9
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.2e-36 157.9 191 46.6
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 1.6e-36 157.5 256 35.9
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 7.9e-36 155.2 283 37.5
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 7.9e-36 155.2 267 37.5
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.3e-35 154.5 233 40.3
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 2.3e-35 153.7 320 33.8
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 3.0e-35 153.3 247 35.6
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 5.1e-35 152.5 187 42.8
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 5.1e-35 152.5 256 38.3
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 3.3e-34 149.8 234 40.2
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 1.5e-31 141.0 267 33.7
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 5.8e-31 139.0 276 33.0
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 1.6e-28 131.0 162 43.8
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 8.7e-27 125.2 304 33.2
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 5.6e-26 122.5 107 51.4
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 8.1e-25 118.6 172 41.9
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 1.8e-24 117.5 124 46.8
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 3.3e-18 96.7 272 30.5
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 3.3e-18 96.7 281 29.2
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.1e-16 91.7 119 37.0
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.2e-15 88.2 108 39.8
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.2e-14 84.0 157 33.8
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 7.4e-10 68.9 113 37.2
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 1.6e-09 67.8 77 48.1
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 8.2e-09 65.5 102 38.2
Glyma.13G348900 Glycine max HOM05D007444 ORTHO05D009359 6.5e-06 55.8 63 55.6
SEGI_20360 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.5e-06 55.8 131 32.8


User provided reference genes

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