Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 0.0e+00 1163.7 592 100.0
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 3.8e-260 901.4 605 79.2
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 1.4e-259 899.4 600 79.0
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 2.8e-215 752.3 541 75.0
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 8.0e-202 707.6 608 65.3
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 5.2e-193 678.3 597 63.0
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 1.2e-189 667.2 601 61.1
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 3.6e-186 655.6 593 60.7
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 8.4e-183 644.4 593 60.0
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 1.4e-182 643.7 497 68.0
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 5.1e-180 635.2 584 61.5
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 1.8e-177 626.7 573 60.2
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 1.5e-176 623.6 567 60.5
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 2.9e-175 619.4 536 64.2
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 1.7e-172 610.1 522 64.6
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 6.6e-172 608.2 533 64.0
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.9e-171 606.7 523 63.5
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 9.6e-171 604.4 493 65.7
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 1.8e-169 600.1 527 62.2
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 1.4e-166 590.5 529 59.5
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 2.1e-162 576.6 472 65.7
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 3.1e-161 572.8 490 60.6
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.5e-160 570.5 490 60.4
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 2.2e-159 566.6 573 54.3
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 9.3e-158 561.2 494 59.7
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 3.5e-157 559.3 577 53.9
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 7.9e-157 558.1 571 54.1
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 1.8e-156 557.0 545 56.9
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 9.6e-155 551.2 596 54.0
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 1.1e-153 547.7 596 52.7
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 2.4e-153 546.6 574 52.8
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 3.1e-153 546.2 612 51.0
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 5.3e-153 545.4 640 50.9
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 9.0e-153 544.7 522 55.9
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 2.0e-152 543.5 496 58.9
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 3.4e-152 542.7 492 58.7
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 3.4e-152 542.7 611 51.1
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 4.5e-152 542.3 498 58.6
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 5.8e-152 542.0 606 52.1
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 1.0e-151 541.2 486 60.5
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.3e-151 540.8 611 50.6
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 2.9e-151 539.7 624 52.4
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 3.8e-151 539.3 494 58.7
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 3.8e-151 539.3 529 55.2
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 4.9e-151 538.9 492 58.7
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 8.4e-151 538.1 494 56.9
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 1.1e-150 537.7 605 51.1
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 1.1e-150 537.7 612 50.5
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 1.9e-150 537.0 528 56.2
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 4.2e-150 535.8 602 51.8
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 4.2e-150 535.8 614 51.5
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 4.2e-150 535.8 605 50.7
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 5.5e-150 535.4 496 57.1
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 9.3e-150 534.6 589 51.1
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 2.1e-149 533.5 491 56.6
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 6.1e-149 531.9 491 56.2
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 7.9e-149 531.6 655 49.0
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 7.9e-149 531.6 655 49.0
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 1.0e-148 531.2 491 56.2
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 1.0e-148 531.2 604 50.8
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.8e-148 530.4 550 53.1
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 2.3e-148 530.0 491 56.0
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 1.1e-147 527.7 492 55.7
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 1.5e-147 527.3 623 50.1
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 1.5e-147 527.3 556 52.3
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 4.3e-147 525.8 590 51.2
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.6e-146 523.9 466 59.4
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 2.8e-146 523.1 500 55.6
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 2.8e-146 523.1 631 50.1
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 3.7e-146 522.7 525 53.5
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 4.8e-146 522.3 484 58.9
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 8.2e-146 521.5 576 53.1
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 5.3e-145 518.8 551 52.8
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 9.0e-145 518.1 400 71.8
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 9.0e-145 518.1 650 47.7
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 1.5e-144 517.3 535 55.1
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.0e-144 516.9 492 56.5
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 1.7e-143 513.8 572 51.7
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 8.5e-143 511.5 511 56.2
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 1.9e-142 510.4 489 55.0
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 3.2e-142 509.6 583 51.1
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 5.5e-142 508.8 636 47.5
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 6.1e-141 505.4 492 56.9
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 6.1e-141 505.4 592 50.0
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 1.8e-140 503.8 597 50.6
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 3.9e-140 502.7 640 48.3
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 6.7e-140 501.9 623 49.9
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 2.2e-138 496.9 493 53.8
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 1.1e-137 494.6 532 53.0
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 6.5e-135 485.3 383 65.3
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.7e-133 479.9 492 53.9
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 4.7e-133 479.2 470 57.0
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 3.1e-129 466.5 502 53.2
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 3.5e-128 463.0 499 51.9
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 2.1e-125 453.8 536 51.3
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 2.7e-125 453.4 452 55.8
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 2.7e-125 453.4 503 51.3
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 2.2e-122 443.7 407 61.2
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.1e-118 431.4 558 44.3
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 1.3e-114 417.9 506 46.2
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.1e-113 414.8 501 51.7
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 1.2e-109 401.4 370 57.0
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 6.1e-109 399.1 396 56.6
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 8.0e-109 398.7 386 55.4
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 6.8e-108 395.6 326 69.0
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 2.0e-107 394.0 505 44.2
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.1e-102 378.3 503 44.1
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 9.8e-99 365.2 630 41.0
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 2.8e-93 347.1 319 59.6
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 6.1e-93 345.9 297 63.3
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.8e-92 344.4 284 62.3
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 7.5e-91 339.0 529 40.8
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 2.2e-90 337.4 358 50.6
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 3.7e-82 310.1 487 39.8
CDE02G2442 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 2.4e-81 307.4 325 51.1
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 2.3e-79 300.8 544 37.1
CSS0007570 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 4.9e-74 283.1 330 51.2
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 1.2e-72 278.5 196 72.4
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 1.1e-68 265.4 275 52.4
CARHR258160 Cardamine hirsuta HOM05D001329 ORTHO05D004946 8.9e-68 262.3 246 54.5
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 2.2e-66 257.7 287 52.3
Haze_15874 Corylus avellana HOM05D001329 ORTHO05D004946 1.1e-65 255.4 331 47.7
Haze_15870 Corylus avellana HOM05D001329 ORTHO05D004946 2.4e-65 254.2 331 47.1
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 7.8e-64 249.2 291 48.5
CSS0047870 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 7.3e-62 242.7 327 45.0
Psat5g295400 Pisum sativum HOM05D001329 ORTHO05D004946 9.9e-59 232.3 145 77.9
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 5.4e-57 226.5 243 56.0
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 2.9e-50 204.1 265 46.4
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 1.9e-46 191.4 538 29.0
Actinidia21724 Actinidia chinensis HOM05D001329 ORTHO05D004946 2.5e-46 191.0 186 54.3
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 2.6e-43 181.0 195 51.3
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 4.5e-43 180.3 200 50.5
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.6e-40 170.2 272 37.9
Lsat_1_v5_gn_1_63401 Lactuca sativa HOM05D001329 ORTHO05D004946 7.4e-38 162.9 145 62.1
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 2.1e-37 161.4 108 73.1
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 6.3e-37 159.8 160 58.8
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.8e-36 158.3 251 39.8
Glyma.13G353300 Glycine max HOM05D001329 ORTHO05D004946 2.6e-35 154.5 123 64.2
Lsat_1_v5_gn_9_94461 Lactuca sativa HOM05D001329 ORTHO05D004946 2.6e-35 154.5 131 62.6
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.4e-35 154.1 255 38.4
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 1.9e-33 148.3 182 48.9
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 6.7e-31 139.8 160 51.9
SEGI_08653 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 1.3e-29 135.6 242 35.1
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 1.1e-25 122.5 153 50.3
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.5e-25 120.2 244 33.6
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.3e-23 114.8 245 34.3
PSO675G5297 Papaver somniferum HOM05D001329 ORTHO05D004946 1.5e-22 112.1 133 44.4
arahy.Tifrunner.gnm1.ann1.3W2ZUL Arachis hypogaea HOM05D001329 ORTHO05D010271 6.5e-18 96.7 73 69.9
Cpa.g.sc25.35 Carica papaya HOM05D001329 ORTHO05D004946 1.2e-16 92.4 101 43.6
Hma1.2p1_0430F.1_g151230 Hydrangea macrophylla HOM05D001329 ORTHO05D004946 2.1e-16 91.7 95 41.1
Eucgr.G00548 Eucalyptus grandis HOM05D001329 ORTHO05D004946 5.1e-15 87.0 95 52.6
Gohir.A05G129875 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.3e-13 82.4 69 58.0
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-12 79.3 71 53.5
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 7.0e-12 76.6 49 71.4
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 9.1e-12 76.3 59 59.3
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 3.5e-11 74.3 53 60.4
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.0e-10 72.8 118 40.7
arahy.Tifrunner.gnm1.ann1.R9IHKK Arachis hypogaea HOM05D001329 ORTHO05D010271 1.7e-10 72.0 51 72.5
arahy.Tifrunner.gnm1.ann1.6Z8QT9 Arachis hypogaea HOM05D001329 ORTHO05D010271 3.8e-10 70.9 51 68.6
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 1.5e-09 68.9 53 60.4
arahy.Tifrunner.gnm1.ann1.H8VH8W Arachis hypogaea HOM05D008137 ORTHO05D010271 2.5e-09 68.2 50 68.0
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 2.5e-09 68.2 48 72.9
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 4.7e-08 63.9 53 52.8
BcaB01g06145 Brassica carinata HOM05D001329 ORTHO05D004946 1.8e-07 62.0 40 57.5
BcaC02g08434 Brassica carinata HOM05D001329 ORTHO05D004946 3.0e-07 61.2 40 57.5
C04p54240 Brassica napus HOM05D001329 ORTHO05D004946 1.5e-06 58.9 80 38.8
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 2.6e-06 58.2 73 41.1
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 3.3e-06 57.8 40 70.0
arahy.Tifrunner.gnm1.ann1.9Y3J9M Arachis hypogaea HOM05D008137 ORTHO05D010271 9.7e-06 56.2 50 62.0
arahy.Tifrunner.gnm1.ann1.B8XGRJ Arachis hypogaea HOM05D008137 ORTHO05D010271 9.7e-06 56.2 50 62.0
arahy.Tifrunner.gnm1.ann1.VBV8TV Arachis hypogaea HOM05D008137 ORTHO05D010271 9.7e-06 56.2 50 62.0
arahy.Tifrunner.gnm1.ann1.YK1T90 Arachis hypogaea HOM05D008137 ORTHO05D010271 9.7e-06 56.2 50 62.0


User provided reference genes

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