Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00982_v3 Cicer arietinum L. HOM05D001408 ORTHO05D001312 7.4e-39 163.3 77 100.0
Glyma.13G372600 Glycine max HOM05D001408 ORTHO05D001312 3.8e-19 97.8 80 63.8
Lj3g0017779 Lotus japonicus HOM05D001408 ORTHO05D001312 6.5e-19 97.1 73 71.2
Glyma.15G001100 Glycine max HOM05D001408 ORTHO05D001312 8.5e-19 96.7 78 64.1
TPR.G29279 Trifolium pratense HOM05D001408 ORTHO05D001312 2.7e-17 91.7 77 67.5
Phvul.005G185000 Phaseolus vulgaris HOM05D001408 ORTHO05D001312 7.9e-17 90.1 78 61.5
TPR.G20517 Trifolium pratense HOM05D001408 ORTHO05D001312 1.8e-16 89.0 67 67.2
arahy.Tifrunner.gnm1.ann1.S69VLQ Arachis hypogaea HOM05D001408 ORTHO05D001312 8.7e-16 86.7 76 59.2
VMungo1080G0918 Vigna mungo HOM05D001408 ORTHO05D001312 1.1e-13 79.7 79 57.0
Manes.06G177100 Manihot esculenta HOM05D001408 ORTHO05D001312 1.9e-10 68.9 77 51.9
FAN09G1717 Fragaria x ananassa HOM05D001408 ORTHO05D001312 1.2e-09 66.2 79 49.4
FAN14G2979 Fragaria x ananassa HOM05D001408 ORTHO05D001312 4.6e-09 64.3 79 49.4
Manes.14G007900 Manihot esculenta HOM05D001408 ORTHO05D001312 6.1e-09 63.9 77 48.1
FvH4_6g37040 Fragaria vesca HOM05D001408 ORTHO05D001312 7.9e-09 63.5 79 49.4
Psat5g307080 Pisum sativum HOM05D001408 ORTHO05D001312 1.0e-08 63.2 71 53.5
Cfa002149 Carpinus fangiana HOM05D001408 ORTHO05D001312 1.4e-08 62.8 81 46.9
FAN05G1663 Fragaria x ananassa HOM05D001408 ORTHO05D001312 2.3e-08 62.0 79 48.1
QL05p084007 Quercus lobata HOM05D001408 ORTHO05D001312 3.0e-08 61.6 75 48.0
Actinidia31126 Actinidia chinensis HOM05D001408 ORTHO05D001312 3.9e-08 61.2 79 44.3
Thecc.06G059100 Theobroma cacao HOM05D001408 ORTHO05D001312 3.9e-08 61.2 79 45.6
Atru.chr1.2696 Acer truncatum HOM05D001408 ORTHO05D001312 5.1e-08 60.8 92 44.6
Duzib192G0702 Durio zibethinus HOM05D001408 ORTHO05D001312 5.1e-08 60.8 79 46.8
Prupe.3G022100 Prunus persica HOM05D001408 ORTHO05D001312 5.1e-08 60.8 76 47.4
CANSAT01G1469 Cannabis sativa HOM05D001408 ORTHO05D001312 1.1e-07 59.7 81 49.4
Haze_16273 Corylus avellana HOM05D001408 ORTHO05D001312 1.1e-07 59.7 88 44.3
GSVIVG01029539001 Vitis vinifera HOM05D001408 ORTHO05D001312 2.0e-07 58.9 79 45.6
ClCG07G014630 Citrullus lanatus HOM05D001408 ORTHO05D001312 2.6e-07 58.5 83 45.8
Duzib235G1422 Durio zibethinus HOM05D001408 ORTHO05D001312 2.6e-07 58.5 79 44.3
Gohir.A06G118400 Gossypium hirsutum HOM05D001408 ORTHO05D001312 2.6e-07 58.5 75 49.3
Gohir.D06G122300 Gossypium hirsutum HOM05D001408 ORTHO05D001312 2.6e-07 58.5 75 49.3
Gorai.010G142500 Gossypium raimondii HOM05D001408 ORTHO05D001312 2.6e-07 58.5 75 49.3
Lalb_Chr14g0376191 Lupinus albus HOM05D001408 ORTHO05D001312 2.6e-07 58.5 91 47.3
MBI13_g34037_MAGBIO Magnolia biondii HOM05D001408 ORTHO05D001312 2.6e-07 58.5 78 48.7
CSS0001108 Camellia sinensis var. sinensis HOM05D001408 ORTHO05D001312 3.3e-07 58.2 79 44.3
CSS0048323 Camellia sinensis var. sinensis HOM05D001408 ORTHO05D001312 3.3e-07 58.2 79 44.3
Actinidia00645 Actinidia chinensis HOM05D001408 ORTHO05D001312 4.4e-07 57.8 77 42.9
Cpa.g.sc155.20 Carica papaya HOM05D001408 ORTHO05D001312 4.4e-07 57.8 79 46.8
Sed0023760 Sechium edule HOM05D001408 ORTHO05D001312 4.4e-07 57.8 81 45.7
MD09G1164700 Malus domestica HOM05D001408 ORTHO05D001312 9.7e-07 56.6 76 44.7
Medtr2g105850 Medicago truncatula HOM05D001408 ORTHO05D001312 1.3e-06 56.2 73 47.9
Potri.008G005800 Populus trichocarpa HOM05D001408 ORTHO05D001312 1.3e-06 56.2 80 45.0
RcHm_v2.0_Chr2g0149591 Rosa chinensis HOM05D001408 ORTHO05D001312 1.3e-06 56.2 79 45.6
Hma1.2p1_0517F.1_g170760 Hydrangea macrophylla HOM05D001408 ORTHO05D001312 1.7e-06 55.8 79 44.3
Hma1.2p1_0517F.1_g170770 Hydrangea macrophylla HOM05D001408 ORTHO05D001312 1.7e-06 55.8 79 44.3
Potri.010G252900 Populus trichocarpa HOM05D001408 ORTHO05D001312 1.7e-06 55.8 83 43.4
Ciclev10026281m.g Citrus clementina HOM05D001408 ORTHO05D001312 2.2e-06 55.5 92 41.3
Nn8g40790 Nelumbo nucifera HOM05D001408 ORTHO05D001312 2.2e-06 55.5 79 45.6
Sabra08G0002900 Salix brachista HOM05D001408 ORTHO05D001312 6.3e-06 53.9 73 42.5


User provided reference genes

Program Settings