Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 7.0e-66 253.8 130 100.0
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 3.5e-57 224.9 129 88.4
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.4e-53 213.0 129 85.3
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 3.0e-53 211.8 128 85.9
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.5e-52 209.5 129 82.9
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 4.4e-52 208.0 129 83.7
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 3.7e-51 204.9 129 82.2
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 1.8e-50 202.6 129 83.7
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 7.8e-49 197.2 129 82.2
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 2.1e-46 189.1 129 76.7
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 3.6e-46 188.3 129 76.7
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.8e-45 186.0 129 76.0
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 5.8e-44 181.0 126 76.2
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 1.4e-42 176.4 130 75.4
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 7.0e-42 174.1 130 70.8
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.3e-40 169.9 129 74.4
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 1.7e-40 169.5 129 69.8
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 3.0e-40 168.7 129 69.8
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 2.5e-39 165.6 129 72.1
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 3.3e-39 165.2 129 71.3
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 7.3e-39 164.1 129 69.8
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 7.3e-39 164.1 129 69.8
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.2e-38 163.3 129 69.8
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 6.2e-38 161.0 129 69.0
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 8.0e-38 160.6 128 64.8
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.1e-37 160.2 130 65.4
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 1.1e-37 160.2 130 68.5
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 3.1e-37 158.7 129 68.2
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 4.0e-37 158.3 129 68.2
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 8.9e-37 157.1 130 69.2
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 8.9e-37 157.1 130 69.2
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 8.9e-37 157.1 137 65.0
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 1.2e-36 156.8 129 66.7
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 2.0e-36 156.0 137 67.2
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 2.6e-36 155.6 129 67.4
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 4.4e-36 154.8 130 68.5
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 4.4e-36 154.8 128 68.0
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 4.4e-36 154.8 128 69.5
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 9.8e-36 153.7 129 65.1
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 2.2e-35 152.5 129 64.3
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 2.9e-35 152.1 128 67.2
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 4.9e-35 151.4 129 64.3
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 6.4e-35 151.0 129 62.8
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 1.1e-34 150.2 130 64.6
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 1.4e-34 149.8 131 64.9
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.4e-34 149.8 131 64.9
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 1.9e-34 149.4 129 65.1
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 2.4e-34 149.1 129 64.3
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 2.4e-34 149.1 128 67.2
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 2.4e-34 149.1 129 61.2
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 2.4e-34 149.1 130 60.8
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 7.0e-34 147.5 129 67.4
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 7.0e-34 147.5 129 61.2
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 2.1e-33 146.0 156 59.0
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.5e-33 145.2 128 64.1
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.5e-33 145.2 128 64.1
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 3.5e-33 145.2 128 64.1
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 7.8e-33 144.1 128 63.3
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.0e-32 143.7 128 60.2
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 1.3e-32 143.3 128 62.5
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.3e-32 143.3 129 61.2
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 2.3e-32 142.5 143 58.0
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 3.9e-32 141.7 124 62.9
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 6.6e-32 141.0 128 64.1
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 6.6e-32 141.0 123 62.6
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.9e-31 139.4 124 64.5
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 5.6e-31 137.9 124 64.5
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 9.5e-31 137.1 128 60.9
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 8.1e-30 134.0 130 56.9
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 8.1e-30 134.0 132 57.6
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.4e-29 133.3 138 53.6
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 7.3e-23 110.9 128 54.7
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.8e-21 106.3 128 50.0
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 4.0e-21 105.1 142 46.5
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 4.0e-21 105.1 88 64.8
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 3.4e-20 102.1 62 80.6
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 2.4e-18 95.9 128 45.3
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 7.8e-17 90.9 127 42.5
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 1.3e-16 90.1 96 51.0
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 4.3e-15 85.1 162 36.4
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 3.6e-14 82.0 119 42.0
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 3.1e-13 79.0 66 62.1
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 9.0e-13 77.4 54 68.5
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 9.0e-13 77.4 86 51.2
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.3e-11 73.6 61 67.2
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.4e-10 69.3 79 51.9
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.2e-09 67.0 102 40.2
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.2e-09 67.0 102 40.2
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.0e-08 63.9 57 57.9
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.3e-08 62.8 75 46.7


User provided reference genes

Program Settings