Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 2.1e-88 328.9 163 100.0
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.6e-57 225.7 121 95.9
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 9.7e-57 223.8 121 93.4
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 1.3e-56 223.4 121 95.0
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 2.4e-55 219.2 121 93.4
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 9.1e-55 217.2 121 93.4
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 1.5e-52 209.9 121 90.1
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 3.2e-52 208.8 121 88.4
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 6.1e-51 204.5 118 89.0
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 8.0e-51 204.1 115 91.3
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 2.3e-50 202.6 115 90.4
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 7.4e-49 197.6 112 90.2
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 5.3e-47 191.4 118 78.0
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 7.0e-47 191.0 114 90.4
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 7.0e-47 191.0 118 77.1
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 1.6e-46 189.9 114 86.0
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 4.5e-46 188.3 104 93.3
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 7.7e-46 187.6 121 75.2
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 7.7e-46 187.6 121 76.0
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 1.3e-45 186.8 109 88.1
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.7e-45 186.4 117 79.5
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 2.9e-45 185.7 133 70.7
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.5e-44 183.3 132 68.9
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.5e-44 182.6 121 72.7
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.2e-44 182.2 121 72.7
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.2e-43 180.3 130 65.4
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.1e-43 179.5 126 68.3
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 4.7e-43 178.3 121 70.2
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 6.1e-43 177.9 121 74.4
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 8.0e-43 177.6 117 76.1
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 8.0e-43 177.6 121 71.9
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.0e-42 177.2 121 71.1
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.8e-42 176.4 115 75.7
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 2.3e-42 176.0 121 71.9
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 2.3e-42 176.0 121 71.1
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 3.0e-42 175.6 138 65.9
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 5.2e-42 174.9 121 71.1
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.8e-42 174.5 121 70.2
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.8e-42 174.5 121 70.2
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 1.5e-41 173.3 115 74.8
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 2.6e-41 172.6 125 68.0
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 3.4e-41 172.2 121 66.9
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 3.4e-41 172.2 123 65.9
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 3.4e-41 172.2 121 71.1
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 5.7e-41 171.4 117 74.4
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.7e-41 171.4 121 66.9
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 7.5e-41 171.0 121 68.6
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 7.5e-41 171.0 121 70.2
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 1.3e-40 170.2 124 66.1
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 1.3e-40 170.2 121 67.8
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 1.3e-40 170.2 113 72.6
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 2.2e-40 169.5 114 70.2
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 2.8e-40 169.1 122 69.7
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 6.3e-40 167.9 121 70.2
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-39 167.2 114 68.4
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.8e-39 166.4 112 75.0
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 2.4e-39 166.0 121 65.3
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.4e-39 166.0 112 74.1
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 3.1e-39 165.6 117 69.2
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 3.1e-39 165.6 112 73.2
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 3.1e-39 165.6 114 71.1
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 4.1e-39 165.2 114 70.2
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 7.0e-39 164.5 121 68.6
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.6e-38 163.3 115 70.4
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 2.7e-38 162.5 114 68.4
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 5.9e-38 161.4 114 69.3
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 7.7e-38 161.0 114 68.4
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 7.7e-38 161.0 121 66.1
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.0e-37 160.6 146 58.2
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.0e-37 160.6 98 78.6
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 1.3e-37 160.2 112 69.6
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.3e-37 160.2 121 64.5
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 2.2e-37 159.5 123 65.0
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 2.2e-37 159.5 121 68.6
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 2.9e-37 159.1 114 69.3
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 3.8e-37 158.7 100 76.0
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 5.0e-37 158.3 112 72.3
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 5.0e-37 158.3 114 68.4
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 5.0e-37 158.3 114 69.3
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 6.5e-37 157.9 120 61.7
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 8.5e-37 157.5 113 69.0
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 1.1e-36 157.1 114 68.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.1e-36 157.1 118 66.9
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.1e-36 157.1 118 66.9
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.1e-36 157.1 109 66.1
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 1.5e-36 156.8 114 68.4
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 2.5e-36 156.0 114 68.4
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.5e-36 156.0 104 73.1
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 3.2e-36 155.6 114 67.5
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 4.2e-36 155.2 111 66.7
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 5.5e-36 154.8 115 69.6
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 7.2e-36 154.5 108 71.3
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 9.4e-36 154.1 111 65.8
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 9.4e-36 154.1 121 62.8
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.2e-35 153.7 104 73.1
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 2.1e-35 152.9 108 68.5
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.4e-34 150.2 109 73.4
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 3.0e-34 149.1 104 70.2
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 2.0e-33 146.4 107 67.3
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 2.0e-33 146.4 89 77.5
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 2.6e-33 146.0 105 71.4
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 2.6e-33 146.0 89 78.7
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 2.6e-33 146.0 103 68.0
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 2.6e-33 146.0 96 72.9
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.4e-33 145.6 104 68.3
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 4.4e-33 145.2 118 61.0
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 9.8e-33 144.1 103 69.9
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 1.3e-32 143.7 104 69.2
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 3.7e-32 142.1 106 62.3
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 4.8e-32 141.7 104 72.1
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 6.3e-32 141.4 111 61.3
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 8.3e-32 141.0 110 64.5
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.1e-31 140.6 104 65.4
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.4e-31 140.2 110 64.5
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 1.4e-31 140.2 106 67.0
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 1.8e-31 139.8 98 70.4
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 3.1e-31 139.0 80 80.0
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 4.5e-30 135.2 91 70.3
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 4.5e-30 135.2 108 57.4
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 2.3e-29 132.9 126 56.3
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 2.9e-29 132.5 98 70.4
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.9e-28 129.8 109 60.6
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 9.5e-28 127.5 103 66.0
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 2.8e-27 125.9 99 60.6
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 6.1e-27 124.8 101 59.4
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.1e-23 114.0 75 76.0
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.4e-23 112.8 93 61.3
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 5.4e-23 111.7 105 64.8
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.0e-21 107.5 111 48.6
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.7e-21 106.7 109 50.5
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.6e-19 99.0 70 65.7
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.0e-18 95.5 62 79.0
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 2.0e-17 93.2 79 55.7
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 4.1e-15 85.5 81 61.7
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.4e-15 85.1 66 65.2
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 6.0e-14 81.6 109 40.4
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 4.0e-10 68.9 52 59.6
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 6.8e-10 68.2 102 38.2
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 1.1e-07 60.8 99 32.3


User provided reference genes

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