Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00913_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 2.0e-21 106.3 141 100.0
Ca_29979_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 2.0e-21 106.3 141 100.0
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 4.2e-16 88.6 141 84.4
Psat0s3961g0080 Pisum sativum HOM05D000135 ORTHO05D000816 1.0e-14 84.0 48 91.7
Psat0s3961g0120 Pisum sativum HOM05D000135 ORTHO05D000816 1.0e-14 84.0 50 88.0
Medtr4g103630 Medicago truncatula HOM05D000135 ORTHO05D000816 1.4e-14 83.6 49 83.7
Medtr4g103650 Medicago truncatula HOM05D000135 ORTHO05D000816 3.9e-14 82.0 45 88.9
Medtr4g103655 Medicago truncatula HOM05D000135 ORTHO05D000816 5.2e-14 81.6 49 81.6
Psat4g065400 Pisum sativum HOM05D000135 ORTHO05D000816 5.2e-14 81.6 50 88.0
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 5.7e-13 78.2 49 71.4
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 4.1e-11 72.0 48 70.8
Lj4g0011466 Lotus japonicus HOM05D000135 ORTHO05D000816 7.0e-11 71.2 45 75.6
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 1.6e-10 70.1 47 70.2
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 2.0e-10 69.7 44 75.0
Lj4g0025643 Lotus japonicus HOM05D000135 ORTHO05D000816 2.6e-10 69.3 44 75.0
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 5.9e-10 68.2 48 68.8
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 7.7e-10 67.8 44 72.7
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 7.7e-10 67.8 49 63.3
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.0e-09 67.4 49 63.3
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 1.3e-09 67.0 44 72.7
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 1.7e-09 66.6 44 70.5
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 2.2e-09 66.2 48 66.7
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 2.9e-09 65.9 45 64.4
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 3.8e-09 65.5 48 66.7
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 3.8e-09 65.5 49 63.3
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 3.8e-09 65.5 48 64.6
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 6.5e-09 64.7 47 63.8
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 6.5e-09 64.7 43 69.8
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 8.5e-09 64.3 44 68.2
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 8.5e-09 64.3 48 62.5
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 8.5e-09 64.3 49 59.2
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 1.1e-08 63.9 43 69.8
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 1.9e-08 63.2 44 68.2
Psat5g140800 Pisum sativum HOM05D000135 ORTHO05D000816 1.9e-08 63.2 47 59.6
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 1.9e-08 63.2 48 64.6
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.2e-08 62.4 47 61.7
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 61.7
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 61.7
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 61.7
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 61.7
Duzib084G0108 Durio zibethinus HOM05D000135 ORTHO05D000816 7.2e-08 61.2 49 59.2
Phvul.005G026000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 7.2e-08 61.2 43 62.8
Glyma.04G194800 Glycine max HOM05D000135 ORTHO05D000816 9.4e-08 60.8 47 59.6
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 1.2e-07 60.5 141 81.6
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 1.6e-07 60.1 43 62.8
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 1.6e-07 60.1 42 64.3
Ciclev10022753m.g Citrus clementina HOM05D000135 ORTHO05D000816 2.1e-07 59.7 51 56.9
Duzib205G1548 Durio zibethinus HOM05D000135 ORTHO05D000816 2.1e-07 59.7 48 54.2
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.1e-07 59.7 44 61.4
Gohir.A03G053400 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 141 61.0
Gohir.D11G039500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 49 57.1
Gorai.007G042400 Gossypium raimondii HOM05D000135 ORTHO05D000816 2.1e-07 59.7 49 57.1
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 3.6e-07 58.9 43 60.5
Gohir.A11G035900 Gossypium hirsutum HOM05D000135 ORTHO05D000816 4.7e-07 58.5 49 55.1
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 6.1e-07 58.2 49 51.0
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.1e-07 58.2 44 61.4
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.1e-07 58.2 44 59.1
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.1e-07 58.2 44 61.4
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 6.1e-07 58.2 49 55.1
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 1.0e-06 57.4 48 54.2
Lj3g0020733 Lotus japonicus HOM05D000135 ORTHO05D000816 1.0e-06 57.4 46 56.5
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 1.0e-06 57.4 43 60.5
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.0e-06 57.4 42 59.5
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 1.4e-06 57.0 136 30.9
Duzib068G0781 Durio zibethinus HOM05D000135 ORTHO05D000816 1.4e-06 57.0 49 55.1
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.4e-06 57.0 44 56.8
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 1.4e-06 57.0 42 57.1
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.4e-06 57.0 49 55.1
Peaxi162Scf00098g00156 Petunia axillaris HOM05D000135 ORTHO05D000816 1.8e-06 56.6 46 54.3
QL02p016339 Quercus lobata HOM05D000135 ORTHO05D000816 1.8e-06 56.6 44 56.8
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 57.1
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 57.1
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 57.1
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 57.1
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 57.1
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 57.1
VMungo1309G1946 Vigna mungo HOM05D000135 ORTHO05D000816 2.3e-06 56.2 47 55.3
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 3.0e-06 55.8 44 54.5
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.0e-06 55.8 42 57.1
QL02p016392 Quercus lobata HOM05D000135 ORTHO05D000816 3.0e-06 55.8 44 56.8
Sabra05G0201600 Salix brachista HOM05D000135 ORTHO05D000816 3.0e-06 55.8 42 59.5
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.0e-06 55.8 42 57.1
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 3.0e-06 55.8 49 51.0
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 3.0e-06 55.8 48 54.2
Potri.002G132500 Populus trichocarpa HOM05D000135 ORTHO05D000816 4.0e-06 55.5 42 59.5
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 4.0e-06 55.5 42 57.1
Lj2C97T3 Lonicera japonica HOM05D000135 ORTHO05D000816 5.2e-06 55.1 42 59.5
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.2e-06 55.1 42 57.1
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 52.1
QL02p016421 Quercus lobata HOM05D000135 ORTHO05D000816 5.2e-06 55.1 44 54.5
TWI12G0256 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 54.2
VMungo1215G1953 Vigna mungo HOM05D000135 ORTHO05D000816 5.2e-06 55.1 45 57.8
CiPaw.07G129800 Carya illinoinensis HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 54.5
Eucgr.F03632 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 54.5
Gohir.A10G155722 Gossypium hirsutum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 54.5
Gohir.D10G109651 Gossypium hirsutum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 54.5
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 6.7e-06 54.7 43 60.5
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 6.7e-06 54.7 42 54.8
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 6.7e-06 54.7 48 52.1
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 54.5
Solyc06g073830.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 42 54.8
Sopen06g030230 Solanum pennellii HOM05D000135 ORTHO05D000816 6.7e-06 54.7 42 54.8
PGSC0003DMG400005909 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 42 54.8
Gohir.A07G051650 Gossypium hirsutum HOM05D000135 ORTHO05D000816 8.8e-06 54.3 44 54.5
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 8.8e-06 54.3 48 52.1
Gohir.D07G056100 Gossypium hirsutum HOM05D000135 ORTHO05D000816 8.8e-06 54.3 44 54.5
Gorai.001G059500 Gossypium raimondii HOM05D000135 ORTHO05D000816 8.8e-06 54.3 44 54.5
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 8.8e-06 54.3 48 52.1
Lj2C97T5 Lonicera japonica HOM05D000135 ORTHO05D000816 8.8e-06 54.3 42 59.5
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 8.8e-06 54.3 48 52.1


User provided reference genes

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