Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 6.3e-174 614.0 307 100.0
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 6.7e-160 567.4 304 91.4
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 4.5e-156 554.7 307 89.9
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 7.2e-154 547.4 306 87.9
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 3.0e-152 542.0 310 88.4
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 8.8e-152 540.4 306 87.6
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 3.1e-149 531.9 306 85.6
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 2.2e-147 525.8 307 85.7
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 3.8e-147 525.0 307 85.7
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 3.8e-147 525.0 306 85.0
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 3.8e-147 525.0 306 85.0
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 6.5e-147 524.2 307 84.7
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 9.8e-143 510.4 306 84.3
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 4.1e-141 505.0 308 81.2
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 3.5e-140 501.9 308 80.5
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 1.7e-139 499.6 308 81.2
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 2.9e-139 498.8 309 81.6
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 7.3e-138 494.2 307 81.1
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 7.3e-138 494.2 307 81.1
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 7.3e-138 494.2 307 80.5
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 1.2e-137 493.4 312 79.2
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 1.2e-137 493.4 307 80.1
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 3.6e-137 491.9 309 79.9
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 3.0e-136 488.8 308 79.2
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 4.0e-136 488.4 308 77.6
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 1.2e-135 486.9 307 78.8
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 1.5e-135 486.5 308 78.6
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 1.5e-135 486.5 307 78.8
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 2.0e-135 486.1 308 77.9
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 7.5e-135 484.2 310 77.4
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 7.5e-135 484.2 310 77.7
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 7.5e-135 484.2 309 78.6
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 1.7e-134 483.0 307 78.2
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 1.7e-134 483.0 308 78.2
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 2.9e-134 482.3 306 77.5
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 2.9e-134 482.3 309 79.6
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 3.7e-134 481.9 307 78.5
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 6.4e-134 481.1 308 79.2
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 1.1e-133 480.3 308 78.2
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 1.8e-133 479.6 310 79.7
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 1.8e-133 479.6 307 77.9
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.2e-133 478.8 305 78.7
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 4.1e-133 478.4 308 77.6
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 4.1e-133 478.4 308 77.6
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 7.0e-133 477.6 309 77.7
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 7.0e-133 477.6 308 77.6
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 1.6e-132 476.5 309 77.0
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.6e-132 476.5 305 78.4
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 5.9e-132 474.6 306 76.1
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 7.8e-132 474.2 306 77.1
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 1.0e-131 473.8 309 77.3
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 3.0e-131 472.2 306 75.2
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.0e-131 472.2 305 77.7
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 3.0e-131 472.2 306 75.8
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 3.9e-131 471.9 309 76.7
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 6.6e-131 471.1 308 78.6
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 6.6e-131 471.1 306 76.5
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 6.6e-131 471.1 308 77.3
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 8.6e-131 470.7 305 77.0
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 5.6e-130 468.0 308 76.6
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 5.6e-130 468.0 327 73.1
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 9.5e-130 467.2 308 76.6
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 9.5e-130 467.2 308 76.6
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 1.2e-129 466.8 308 76.9
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 1.6e-129 466.5 308 76.9
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 1.6e-129 466.5 308 76.6
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 1.6e-129 466.5 308 77.3
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 4.7e-129 464.9 318 74.5
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 3.1e-128 462.2 313 76.0
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 4.0e-128 461.8 306 77.1
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 5.2e-128 461.5 309 75.7
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 1.2e-127 460.3 309 75.4
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 1.2e-127 460.3 308 76.0
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 5.8e-127 458.0 315 72.4
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 9.8e-127 457.2 308 75.0
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 9.8e-127 457.2 307 73.9
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 1.3e-126 456.8 308 74.4
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 1.7e-126 456.4 315 72.7
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 1.7e-126 456.4 315 72.7
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 4.9e-126 454.9 308 74.7
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 6.4e-126 454.5 308 73.7
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 8.3e-126 454.1 305 74.8
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 1.4e-125 453.4 306 75.5
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.9e-125 453.0 314 74.5
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 2.4e-125 452.6 307 74.3
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 1.2e-124 450.3 317 71.9
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 4.6e-124 448.4 307 75.2
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 1.3e-123 446.8 315 70.5
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 2.3e-123 446.0 317 70.3
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 5.0e-123 444.9 315 70.8
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 6.6e-123 444.5 306 72.9
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 4.3e-122 441.8 317 69.7
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 9.5e-122 440.7 317 69.7
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 2.1e-121 439.5 265 80.8
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 6.2e-121 438.0 324 68.2
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.1e-120 437.2 328 69.5
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.3e-120 436.0 290 74.8
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 8.9e-120 434.1 296 74.3
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 1.5e-119 433.3 278 77.7
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 2.0e-119 433.0 299 73.9
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 4.4e-119 431.8 331 69.5
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 9.8e-119 430.6 315 68.9
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 3.2e-117 425.6 307 73.0
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 9.2e-117 424.1 278 75.9
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.6e-116 421.8 268 77.6
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 6.2e-113 411.4 320 65.9
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 5.2e-112 408.3 322 64.6
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 6.8e-112 407.9 322 64.6
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 1.0e-107 394.0 306 64.7
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.7e-107 393.3 305 67.2
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 7.3e-106 387.9 259 73.7
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 6.8e-104 381.3 221 83.7
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.7e-102 376.7 305 66.2
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 4.9e-102 375.2 231 78.8
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 3.2e-101 372.5 332 59.6
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 8.7e-99 364.4 229 74.7
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 1.3e-97 360.5 340 57.4
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 3.6e-97 359.0 307 62.2
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 6.2e-97 358.2 302 63.2
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 8.1e-97 357.8 308 59.1
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 1.2e-95 354.0 308 64.0
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 2.1e-92 343.2 204 84.8
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 3.0e-91 339.3 226 77.0
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 3.3e-82 309.3 278 58.6
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 1.1e-80 304.3 316 55.7
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 1.8e-75 287.0 204 71.1
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 9.6e-74 281.2 323 49.2
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 2.8e-73 279.6 165 84.2
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 2.6e-71 273.1 246 57.3
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 2.9e-70 269.6 155 84.5
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 6.1e-68 261.9 171 80.1
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 1.8e-64 250.4 346 43.1
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 1.7e-62 243.8 150 79.3
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 6.1e-60 235.3 168 69.0
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.8e-57 226.5 134 82.1
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 1.0e-54 218.0 159 68.6
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 1.4e-48 197.6 131 77.9
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.1e-48 196.1 112 84.8
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.6e-47 193.4 121 78.5
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 1.0e-46 191.4 273 41.8
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.3e-46 191.0 121 76.9
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.7e-46 190.7 121 76.9
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.7e-46 190.7 121 76.9
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.5e-46 188.7 121 76.0
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.5e-45 187.6 118 78.0
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 2.5e-45 186.8 239 48.1
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.5e-45 186.8 116 79.3
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.2e-45 186.4 118 78.0
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.6e-44 184.1 118 76.3
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.6e-44 183.0 118 75.4
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.3e-40 169.1 297 42.8
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.5e-39 166.4 93 84.9
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 1.7e-38 164.1 102 77.5
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 2.9e-38 163.3 102 77.5
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.2e-37 159.5 155 56.1
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 1.0e-30 138.3 92 71.7
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.8e-30 136.3 84 78.6
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 1.0e-27 128.3 135 52.6
C03p32750 Brassica napus HOM05D003958 ORTHO05D004864 3.4e-26 123.2 95 62.1
BolC3t15610H Brassica oleracea HOM05D003958 ORTHO05D004864 3.4e-26 123.2 95 62.1
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.3e-21 106.3 64 79.7
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.5e-21 105.1 64 79.7
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.2e-19 99.4 92 59.8
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 2.6e-18 97.1 74 68.9
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 1.3e-17 94.7 74 64.9
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.3e-17 94.7 92 58.7
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.1e-16 91.7 92 56.5
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 7.0e-16 89.0 50 80.0
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 7.0e-16 89.0 50 80.0
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.0e-15 87.4 50 78.0
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 2.0e-15 87.4 50 78.0
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 2.0e-15 87.4 47 80.9
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 2.0e-15 87.4 77 62.3
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 3.5e-15 86.7 108 49.1
Solyc06g053690.3 Solanum lycopersicum HOM05D003958 ORTHO05D004864 7.8e-15 85.5 62 66.1
Oeu056467.1 Olea europaea HOM05D003958 ORTHO05D004864 1.0e-14 85.1 230 28.3
Medtr2g014570 Medicago truncatula HOM05D003958 ORTHO05D004864 1.3e-14 84.7 46 87.0
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 2.0e-07 60.8 102 43.1
BcaC03g13467 Brassica carinata HOM05D002486 ORTHO05D002606 8.6e-06 55.5 153 31.4


User provided reference genes

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