Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 1.3e-203 713.0 408 100.0
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 1.8e-99 367.1 417 60.0
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 1.6e-92 344.0 427 56.9
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 1.1e-56 224.9 446 46.2
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 1.2e-55 221.5 444 43.5
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 2.5e-53 213.8 445 44.9
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 3.8e-49 199.9 446 43.3
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 1.0e-46 191.8 443 43.8
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 1.1e-45 188.3 448 42.9
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 1.7e-38 164.5 483 36.6
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 6.6e-38 162.5 483 35.4
Psat7g094000 Pisum sativum HOM05D004305 ORTHO05D005159 1.8e-30 137.9 402 35.6
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 1.6e-28 131.3 435 34.3
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 3.1e-27 127.1 498 32.5
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 5.8e-26 122.9 414 31.6
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 2.2e-25 120.9 413 31.2
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 1.4e-24 118.2 415 31.3
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 4.2e-24 116.7 472 32.2
Medtr4g094532 Medicago truncatula HOM05D004305 ORTHO05D005159 4.2e-24 116.7 402 33.1
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 2.1e-23 114.4 501 27.9
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 6.0e-23 112.8 412 30.1
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 7.9e-23 112.5 460 29.3
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 1.0e-22 112.1 426 32.9
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 1.3e-22 111.7 463 31.5
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 1.5e-21 108.2 422 28.4
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 1.5e-21 108.2 478 29.5
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 2.5e-21 107.5 406 29.8
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 3.3e-21 107.1 462 29.7
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 4.3e-21 106.7 440 29.3
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 4.3e-21 106.7 472 31.1
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 9.6e-21 105.5 456 29.6
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 9.6e-21 105.5 510 28.8
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 1.6e-20 104.8 434 29.0
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 1.6e-20 104.8 434 29.0
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 1.6e-20 104.8 468 30.6
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 2.8e-20 104.0 423 30.3
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 4.8e-20 103.2 492 30.7
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 1.4e-19 101.7 432 28.5
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 3.1e-19 100.5 439 31.4
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 5.3e-19 99.8 391 30.7
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 5.3e-19 99.8 452 31.4
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 9.0e-19 99.0 432 28.0
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 9.0e-19 99.0 510 27.8
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 1.2e-18 98.6 426 30.5
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 1.5e-18 98.2 465 29.7
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 2.0e-18 97.8 391 30.4
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 3.4e-18 97.1 417 31.9
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 5.8e-18 96.3 391 30.2
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 7.6e-18 95.9 220 35.9
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 7.6e-18 95.9 455 29.5
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 1.0e-17 95.5 505 29.7
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 1.7e-17 94.7 406 30.0
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.9e-17 94.0 448 29.7
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 3.8e-17 93.6 446 29.4
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 3.8e-17 93.6 217 45.6
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.1e-16 92.0 505 28.7
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 1.4e-16 91.7 401 30.2
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 1.4e-16 91.7 401 30.2
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 1.4e-16 91.7 434 29.5
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 1.9e-16 91.3 461 30.2
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 2.5e-16 90.9 461 30.2
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 7.1e-16 89.4 482 29.9
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 9.3e-16 89.0 532 27.1
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 1.6e-15 88.2 466 26.8
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 2.1e-15 87.8 434 28.1
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 2.7e-15 87.4 424 30.2
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 2.7e-15 87.4 406 29.6
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 2.7e-15 87.4 406 29.6
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 2.7e-15 87.4 436 29.8
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 4.6e-15 86.7 452 29.6
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 6.1e-15 86.3 431 28.5
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 7.9e-15 85.9 480 27.7
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 1.0e-14 85.5 277 29.2
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.0e-14 85.5 449 27.6
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 2.3e-14 84.3 446 27.8
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 2.3e-14 84.3 454 27.8
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 3.9e-14 83.6 62 67.7
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 6.7e-14 82.8 501 28.3
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 8.7e-14 82.4 446 26.2
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.1e-13 82.0 446 27.8
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 1.5e-13 81.6 221 34.8
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.9e-13 81.3 451 27.5
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 1.9e-13 81.3 452 26.5
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 2.5e-13 80.9 477 28.5
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 3.3e-13 80.5 493 26.0
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 3.3e-13 80.5 203 38.4
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 4.3e-13 80.1 311 30.9
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 4.3e-13 80.1 425 26.4
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 4.3e-13 80.1 521 28.6
A09p21070 Brassica napus HOM05D004305 ORTHO05D005159 5.7e-13 79.7 391 29.7
TPR.G27520 Trifolium pratense HOM05D004305 ORTHO05D005159 5.7e-13 79.7 60 70.0
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 2.8e-12 77.4 66 56.1
Thhalv10003311m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 3.7e-12 77.0 388 28.6
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 3.7e-12 77.0 458 28.6
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 4.8e-12 76.6 447 27.5
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 4.8e-12 76.6 450 30.0
Ah.04g165990 Amaranthus hybridus HOM05D023924 ORTHO05D023401 6.3e-12 76.3 59 66.1
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 8.2e-12 75.9 391 29.4
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 1.1e-11 75.5 391 29.4
CARHR178780 Cardamine hirsuta HOM05D004305 ORTHO05D005159 1.4e-11 75.1 391 28.9
TPR.G30380 Trifolium pratense HOM05D004305 ORTHO05D005159 1.8e-11 74.7 311 30.2
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 2.4e-11 74.3 475 27.2
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 2.4e-11 74.3 459 26.6
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 2.4e-11 74.3 223 35.4
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 4.1e-11 73.6 469 24.9
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 5.3e-11 73.2 58 67.2
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 9.0e-11 72.4 507 27.0
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 9.0e-11 72.4 438 28.5
BcaC04g21838 Brassica carinata HOM05D004305 ORTHO05D005159 1.2e-10 72.0 391 29.9
C09p26810 Brassica napus HOM05D004305 ORTHO05D005159 1.2e-10 72.0 391 29.9
BolC9t55570H Brassica oleracea HOM05D004305 ORTHO05D005159 1.2e-10 72.0 391 29.2
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 1.5e-10 71.6 252 31.7
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 3.4e-10 70.5 446 27.8
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 5.9e-10 69.7 205 39.0
BcaB07g30950 Brassica carinata HOM05D004305 ORTHO05D005159 5.9e-10 69.7 391 28.4
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 7.7e-10 69.3 211 29.9
BcaB07g30530 Brassica carinata HOM05D004305 ORTHO05D005159 7.7e-10 69.3 385 29.4
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 7.7e-10 69.3 398 27.9
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 7.7e-10 69.3 423 27.2
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 1.7e-09 68.2 466 29.2
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 2.9e-09 67.4 461 30.6
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 3.8e-09 67.0 455 27.0
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 3.8e-09 67.0 447 28.0
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 5.0e-09 66.6 401 27.9
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 6.5e-09 66.2 459 28.1
ECA247G2099 Erigeron canadensis HOM05D004305 ORTHO05D005159 1.9e-08 64.7 419 25.8
BraA06t27598Z Brassica rapa HOM05D004305 ORTHO05D005159 2.5e-08 64.3 383 26.1
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 4.2e-08 63.5 455 27.5
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 7.2e-08 62.8 209 32.1
Sed0024509 Sechium edule HOM05D004305 ORTHO05D005159 9.4e-08 62.4 418 27.0
BraA02t07875Z Brassica rapa HOM05D004305 ORTHO05D005159 1.6e-07 61.6 384 27.3
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 2.1e-07 61.2 220 28.6
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 3.6e-07 60.5 389 25.7
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 3.6e-07 60.5 389 25.7
Sed0021177 Sechium edule HOM05D004305 ORTHO05D005159 4.6e-07 60.1 51 62.7
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 7.9e-07 59.3 393 29.0
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 1.4e-06 58.5 363 27.8
BcaC03g16656 Brassica carinata HOM05D004305 ORTHO05D005159 2.3e-06 57.8 200 30.5
A06p47270 Brassica napus HOM05D004305 ORTHO05D005159 3.0e-06 57.4 383 26.9
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 3.0e-06 57.4 443 26.0
A02p28380 Brassica napus HOM05D004305 ORTHO05D005159 6.7e-06 56.2 385 28.1
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 8.8e-06 55.8 402 26.9
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 8.8e-06 55.8 413 27.8


User provided reference genes

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