Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00838_v3 Cicer arietinum L. HOM05D006932 ORTHO05D009616 0.0e+00 1748.8 909 100.0
Medtr3g113630 Medicago truncatula HOM05D006932 ORTHO05D009616 5.4e-306 1054.3 932 65.5
TPR.G34552 Trifolium pratense HOM05D006932 ORTHO05D009616 5.4e-306 1054.3 1001 62.3
Psat0s2878g0080 Pisum sativum HOM05D006932 ORTHO05D009616 5.7e-223 778.5 936 54.3
Phvul.009G009500 Phaseolus vulgaris HOM05D006932 ORTHO05D009616 1.9e-186 657.1 935 47.6
VMungo1309G1702 Vigna mungo HOM05D006932 ORTHO05D009616 7.8e-180 635.2 901 46.2
Glyma.06G023500 Glycine max HOM05D006932 ORTHO05D009616 5.6e-178 629.0 626 58.5
Lj1g0021590 Lotus japonicus HOM05D006932 ORTHO05D009616 3.9e-155 553.1 613 56.3
Lalb_Chr23g0266091 Lupinus albus HOM05D006932 ORTHO05D009616 1.7e-150 537.7 931 43.4
arahy.Tifrunner.gnm1.ann1.XXR9N9 Arachis hypogaea HOM05D006932 ORTHO05D009616 1.0e-139 501.9 942 41.6
arahy.Tifrunner.gnm1.ann1.Z8J4EM Arachis hypogaea HOM05D006932 ORTHO05D009616 5.1e-139 499.6 936 41.5
Lj6g0018015 Lotus japonicus HOM05D006932 ORTHO05D009616 5.2e-107 393.3 494 50.6
QL02p012013 Quercus lobata HOM05D006932 ORTHO05D009616 5.4e-88 330.1 958 33.1
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 4.5e-87 327.0 445 47.0
CiPaw.07G147900 Carya illinoinensis HOM05D006932 ORTHO05D009616 1.9e-85 321.6 681 37.9
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 2.3e-83 314.7 374 50.0
MD08G1010800 Malus domestica HOM05D006932 ORTHO05D009616 2.0e-82 311.6 525 42.5
Prupe.1G363400 Prunus persica HOM05D006932 ORTHO05D009616 1.3e-81 308.9 535 40.2
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 1.7e-81 308.5 372 50.3
COL.COLO4_26127 Corchorus olitorius HOM05D006932 ORTHO05D009616 2.8e-81 307.8 350 50.9
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 3.2e-80 304.3 545 40.0
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 7.8e-79 299.7 392 48.2
AT1G20060 Arabidopsis thaliana HOM05D006932 ORTHO05D009616 1.0e-78 299.3 396 49.5
BcaB03g14335 Brassica carinata HOM05D006932 ORTHO05D009616 2.9e-78 297.7 380 49.7
Ciclev10003784m.g Citrus clementina HOM05D006932 ORTHO05D009616 6.6e-78 296.6 405 46.7
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 6.6e-78 296.6 488 41.0
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 1.5e-77 295.4 370 48.9
Thecc.08G046600 Theobroma cacao HOM05D006932 ORTHO05D009616 1.5e-77 295.4 396 45.5
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 1.5e-77 295.4 394 47.5
Gorai.009G193700 Gossypium raimondii HOM05D006932 ORTHO05D009616 1.9e-77 295.0 428 44.6
Carub.0001s1959 Capsella rubella HOM05D006932 ORTHO05D009616 9.5e-77 292.7 454 45.6
Gohir.D05G188400 Gossypium hirsutum HOM05D006932 ORTHO05D009616 2.8e-76 291.2 428 43.9
CARHR020530 Cardamine hirsuta HOM05D006932 ORTHO05D009616 1.0e-75 289.3 396 48.5
AL1G32860 Arabidopsis lyrata HOM05D006932 ORTHO05D009616 1.4e-75 288.9 425 46.6
Actinidia37937 Actinidia chinensis HOM05D006932 ORTHO05D009616 3.1e-75 287.7 410 45.6
C07p23410 Brassica napus HOM05D006932 ORTHO05D009616 2.0e-74 285.0 411 46.7
Sp1g17820 Schrenkiella parvula HOM05D006932 ORTHO05D009616 2.0e-74 285.0 377 49.9
BcaB03g14345 Brassica carinata HOM05D006932 ORTHO05D009616 3.4e-74 284.3 410 46.8
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 5.8e-74 283.5 359 46.5
Gohir.A05G185600 Gossypium hirsutum HOM05D006932 ORTHO05D009616 5.8e-74 283.5 508 39.8
Peaxi162Scf00553g00220 Petunia axillaris HOM05D006932 ORTHO05D009616 5.8e-74 283.5 460 41.5
THA.LOC104811418 Tarenaya hassleriana HOM05D006932 ORTHO05D009616 1.3e-73 282.3 713 35.1
ClCG08G014220 Citrullus lanatus HOM05D006932 ORTHO05D009616 2.2e-73 281.6 641 37.1
A07p16040 Brassica napus HOM05D006932 ORTHO05D009616 2.9e-73 281.2 369 48.8
BraA07t29332Z Brassica rapa HOM05D006932 ORTHO05D009616 2.9e-73 281.2 369 48.8
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 2.9e-73 281.2 544 38.1
Cpa.g.sc26.310 Carica papaya HOM05D006932 ORTHO05D009616 1.1e-72 279.3 413 45.0
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 1.9e-72 278.5 712 34.3
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 5.4e-72 276.9 452 40.9
Hund05180 Selenicereus undatus HOM05D006932 ORTHO05D009616 5.4e-72 276.9 948 30.6
GSVIVG01009938001 Vitis vinifera HOM05D006932 ORTHO05D009616 2.0e-71 275.0 336 50.3
CsaV3_2G029620 Cucumis sativus L. HOM05D006932 ORTHO05D009616 7.8e-71 273.1 388 47.4
Sed0011683 Sechium edule HOM05D006932 ORTHO05D009616 1.3e-70 272.3 633 37.3
MELO3C011020.2 Cucumis melo HOM05D006932 ORTHO05D009616 2.5e-69 268.1 477 42.3
Lsat_1_v5_gn_2_12640 Lactuca sativa HOM05D006932 ORTHO05D009616 5.6e-69 266.9 577 35.5
PGR031G2736 Punica granatum HOM05D006932 ORTHO05D009616 2.8e-68 264.6 411 41.8
RhsimUnG0065200 Rhododendron simsii HOM05D006932 ORTHO05D009616 2.8e-68 264.6 541 37.2
Thhalv10006798m.g Eutrema salsugineum HOM05D006932 ORTHO05D009616 3.6e-68 264.2 498 39.2
ECA238G0815 Erigeron canadensis HOM05D006932 ORTHO05D009616 6.2e-68 263.5 388 42.3
Sopen08g012470 Solanum pennellii HOM05D006932 ORTHO05D009616 6.2e-68 263.5 946 30.1
CANSAT25G0116 Cannabis sativa HOM05D006932 ORTHO05D009616 1.1e-67 262.7 372 48.1
Aa31LG7G4500 Aethionema arabicum HOM05D006932 ORTHO05D009616 4.0e-67 260.8 495 39.6
Sc15g0004860 Simmondsia chinensis HOM05D006932 ORTHO05D009616 1.2e-66 259.2 568 36.4
BolC7t42874H Brassica oleracea HOM05D006932 ORTHO05D009616 4.4e-66 257.3 372 46.8
Manes.18G012000 Manihot esculenta HOM05D006932 ORTHO05D009616 9.8e-66 256.1 459 40.1
Cc10_g01490 Coffea canephora HOM05D006932 ORTHO05D009616 1.3e-65 255.8 469 39.4
PSO700G0201 Papaver somniferum HOM05D006932 ORTHO05D009616 1.9e-64 251.9 383 44.1
Aqoxy5G01813 Aquilegia oxysepala HOM05D006932 ORTHO05D009616 2.4e-64 251.5 543 37.0
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 1.6e-63 248.8 388 43.3
ATR0090G024 Amborella trichopoda HOM05D006932 ORTHO05D009616 7.8e-63 246.5 396 40.7
Os02g0101800 Oryza sativa ssp. japonica HOM05D006932 ORTHO05D009616 3.9e-62 244.2 368 44.3
AUR62040551 Chenopodium quinoa HOM05D006932 ORTHO05D009616 7.3e-61 240.0 961 29.4
Nn5g30750 Nelumbo nucifera HOM05D006932 ORTHO05D009616 9.5e-61 239.6 465 35.9
SalBow7G2156 Salvia bowleyana HOM05D006932 ORTHO05D009616 9.5e-61 239.6 488 37.7
HanXRQChr14g0431051 Helianthus annuus HOM05D006932 ORTHO05D009616 4.7e-60 237.3 254 54.7
Zm00001eb210100 Zea mays HOM05D006932 ORTHO05D009616 8.9e-59 233.0 414 40.3
SGA_v2.0_scaffold92G28210 Striga asiatica HOM05D006932 ORTHO05D009616 8.3e-57 226.5 262 50.8
Migut.C00855 Erythranthe guttata HOM05D006932 ORTHO05D009616 2.4e-56 224.9 1058 27.8
unitig_899.g15428 Utricularia gibba HOM05D006932 ORTHO05D009616 6.6e-54 216.9 375 41.9
SEGI_37211 Sequoiadendron giganteum HOM05D006932 ORTHO05D009616 1.5e-53 215.7 492 35.2
Prupe.8G272100 Prunus persica HOM05D006932 ORTHO05D009616 4.7e-52 210.7 272 47.4
EL10Ac1g02169 Beta vulgaris HOM05D006932 ORTHO05D009616 8.9e-51 206.5 481 34.1
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 1.2e-50 206.1 552 33.0
Solyc08g042030.3 Solanum lycopersicum HOM05D006932 ORTHO05D009616 1.4e-48 199.1 205 55.1
TAR376G0059 Trochodendron aralioides HOM05D006932 ORTHO05D009616 3.0e-46 191.4 376 36.4
Haze_22656 Corylus avellana HOM05D006932 ORTHO05D009616 3.3e-45 188.0 251 47.8
Nitab4.5_0003251g0090 Nicotiana tabacum HOM05D006932 ORTHO05D009616 5.3e-43 180.6 958 27.8
HPP92_014539 Vanilla planifolia HOM05D006932 ORTHO05D009616 1.2e-39 169.5 375 33.9
Eucgr.H00967 Eucalyptus grandis HOM05D006932 ORTHO05D009616 1.6e-39 169.1 151 64.2
AUR62041481 Chenopodium quinoa HOM05D006932 ORTHO05D009616 5.1e-38 164.1 363 35.0
FAN20G1755 Fragaria x ananassa HOM05D006932 ORTHO05D009616 9.9e-34 149.8 245 40.8
Ca_15498_v3 Cicer arietinum L. HOM05D006932 ORTHO05D009616 2.2e-33 148.7 171 54.4
CSS0004466 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D009616 1.6e-20 105.9 123 55.3
TWI34G0106 Tripterygium wilfordii HOM05D006932 ORTHO05D413486 2.2e-09 68.9 59 55.9
Mapoly0026s0062 Marchantia polymorpha HOM05D000108 ORTHO05D009193 2.9e-09 68.6 270 25.6
GSVIVG01009937001 Vitis vinifera HOM05D006932 ORTHO05D014708 1.6e-07 62.8 73 49.3
Eucgr.H00968 Eucalyptus grandis HOM05D006932 ORTHO05D014708 7.9e-07 60.5 105 41.0
Gohir.D06G031600 Gossypium hirsutum HOM05D000108 ORTHO05D001407 7.9e-07 60.5 198 28.3
Gorai.010G034800 Gossypium raimondii HOM05D000108 ORTHO05D001407 7.9e-07 60.5 198 28.3
CSS0026676 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D009616 1.8e-06 59.3 46 63.0
FvH4_5g35340 Fragaria vesca HOM05D000108 ORTHO05D001407 1.8e-06 59.3 199 27.6
FAN04G1245 Fragaria x ananassa HOM05D000108 ORTHO05D001407 1.8e-06 59.3 199 27.6
FAN08G2169 Fragaria x ananassa HOM05D000108 ORTHO05D001407 1.8e-06 59.3 199 27.6
FAN18G4137 Fragaria x ananassa HOM05D000108 ORTHO05D001407 1.8e-06 59.3 199 27.6
Pp3c3_9850 Physcomitrium patens HOM05D000108 ORTHO05D001407 2.3e-06 58.9 217 26.7
THA.LOC104799089 Tarenaya hassleriana HOM05D000108 ORTHO05D001407 2.3e-06 58.9 204 27.9
Ca_06978_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002608 3.0e-06 58.5 222 27.9
MD08G1078700 Malus domestica HOM05D000240 ORTHO05D002608 3.9e-06 58.2 219 27.9
Cpa.g.sc21.19 Carica papaya HOM05D000108 ORTHO05D001407 5.1e-06 57.8 199 26.6
MD11G1176500 Malus domestica HOM05D000108 ORTHO05D001378 5.1e-06 57.8 227 26.9
Thecc.08G070900 Theobroma cacao HOM05D000108 ORTHO05D001407 5.1e-06 57.8 200 28.5
Aqoxy2G01801 Aquilegia oxysepala HOM05D000240 ORTHO05D002608 6.7e-06 57.4 161 32.9
BolC1t00536H Brassica oleracea HOM05D000108 ORTHO05D001407 6.7e-06 57.4 266 24.4
Migut.N02859 Erythranthe guttata HOM05D000108 ORTHO05D001407 6.7e-06 57.4 271 25.8
FAN11G2165 Fragaria x ananassa HOM05D000108 ORTHO05D001378 6.7e-06 57.4 226 26.5
Medtr1g017540 Medicago truncatula HOM05D000240 ORTHO05D002608 6.7e-06 57.4 222 26.6
Glyma.14G089072 Glycine max HOM05D000240 ORTHO05D002608 8.8e-06 57.0 222 27.9
Glyma.17G233200 Glycine max HOM05D000240 ORTHO05D002608 8.8e-06 57.0 222 27.9
MD08G1198000 Malus domestica HOM05D000108 ORTHO05D001407 8.8e-06 57.0 186 27.4
vmacro21339 Vaccinium macrocarpon HOM05D000108 ORTHO05D001407 8.8e-06 57.0 232 25.0
VMungo0647G2543 Vigna mungo HOM05D000240 ORTHO05D002608 8.8e-06 57.0 222 27.9


User provided reference genes

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