Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 1.6e-244 849.0 427 100.0
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 2.0e-234 815.5 427 94.8
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 6.2e-228 793.9 423 93.9
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 9.8e-226 786.6 421 91.4
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 2.2e-225 785.4 421 91.7
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 1.4e-224 782.7 421 90.5
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 2.7e-223 778.5 421 90.3
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 1.1e-221 773.1 421 89.3
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 3.1e-219 765.0 424 87.7
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 8.9e-219 763.5 424 88.9
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 1.7e-217 759.2 421 88.1
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 2.2e-217 758.8 421 88.8
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 8.3e-217 756.9 427 87.8
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.1e-216 756.5 421 87.4
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 1.4e-216 756.1 423 87.7
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 2.4e-216 755.4 424 87.7
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 2.4e-216 755.4 421 88.4
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 7.1e-216 753.8 424 87.5
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 9.2e-216 753.4 421 88.4
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 9.2e-216 753.4 421 87.9
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 9.2e-216 753.4 424 87.0
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.1e-215 752.3 424 86.8
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 2.7e-215 751.9 424 87.3
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 2.7e-215 751.9 421 87.4
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 1.7e-214 749.2 421 87.2
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 2.3e-214 748.8 424 87.0
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.9e-214 748.0 420 86.7
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 6.6e-214 747.3 421 86.5
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.5e-213 746.1 420 86.7
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 1.9e-213 745.7 424 85.8
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 2.5e-213 745.3 421 87.4
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 3.3e-213 745.0 421 86.9
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 3.3e-213 745.0 421 86.9
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.6e-213 744.2 420 86.7
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 5.6e-213 744.2 421 86.9
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 7.3e-213 743.8 421 86.5
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 7.3e-213 743.8 421 86.7
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 9.5e-213 743.4 421 86.7
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 2.1e-212 742.3 421 86.7
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 4.0e-211 738.0 421 86.0
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 5.2e-211 737.6 421 86.2
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.2e-209 732.3 434 83.6
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 3.8e-209 731.5 421 86.0
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 6.4e-209 730.7 421 85.3
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 6.4e-209 730.7 421 84.8
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 1.1e-208 729.9 421 85.3
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 1.1e-208 729.9 413 86.2
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 1.1e-208 729.9 421 85.5
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 1.4e-208 729.6 421 85.5
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.4e-208 728.8 410 87.3
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 3.2e-208 728.4 421 84.3
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 1.2e-207 726.5 445 81.6
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 2.7e-207 725.3 421 83.8
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 3.5e-207 724.9 421 84.6
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 3.5e-207 724.9 424 83.7
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 7.8e-207 723.8 422 85.3
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 2.3e-206 722.2 421 84.3
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 2.3e-206 722.2 411 86.1
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 3.9e-206 721.5 420 85.2
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 6.6e-206 720.7 421 84.6
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 8.7e-206 720.3 421 84.1
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 8.7e-206 720.3 421 84.1
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 8.7e-206 720.3 421 84.3
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 8.7e-206 720.3 421 84.3
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 1.1e-205 719.9 420 83.8
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.5e-205 719.5 422 83.9
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 1.9e-205 719.2 421 84.3
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 2.5e-205 718.8 421 84.1
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 3.3e-205 718.4 421 84.1
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 3.3e-205 718.4 421 84.1
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 4.3e-205 718.0 427 84.5
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 9.6e-205 716.8 421 84.3
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 1.6e-204 716.1 421 82.7
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.1e-204 715.7 422 83.2
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 1.8e-203 712.6 421 82.9
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 1.8e-203 712.6 467 77.7
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 3.1e-203 711.8 421 84.1
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 3.1e-203 711.8 416 84.1
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 3.1e-203 711.8 421 83.8
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 4.0e-203 711.4 421 83.8
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 9.0e-203 710.3 416 84.1
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 1.5e-202 709.5 423 82.5
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 1.5e-202 709.5 421 81.9
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 7.6e-202 707.2 421 83.6
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 2.2e-201 705.7 420 82.4
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 1.4e-200 703.0 411 84.2
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 1.9e-200 702.6 434 81.3
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.4e-200 701.0 421 80.3
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 7.1e-200 700.7 421 82.2
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 1.2e-199 699.9 424 81.1
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 4.6e-199 698.0 424 80.9
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 1.3e-198 696.4 421 80.5
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 6.6e-198 694.1 420 80.7
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 1.1e-197 693.3 421 79.6
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 1.5e-197 693.0 409 84.4
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 1.9e-197 692.6 417 80.8
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 1.4e-195 686.4 364 93.7
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 9.0e-195 683.7 424 81.1
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 1.4e-192 676.4 424 76.9
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.6e-191 672.9 415 79.0
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 1.0e-190 670.2 421 80.0
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 1.5e-189 666.4 421 80.0
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 7.4e-189 664.1 421 79.1
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 1.5e-186 656.4 421 77.9
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.5e-186 654.8 421 77.9
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 7.6e-186 654.1 422 74.6
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 8.4e-185 650.6 429 77.2
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 3.2e-184 648.7 422 74.2
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 4.2e-184 648.3 412 78.4
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 7.9e-183 644.0 419 73.7
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 6.7e-182 641.0 409 79.5
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 3.3e-181 638.6 607 58.2
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 4.3e-181 638.3 424 76.2
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.1e-180 636.0 419 73.3
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 6.2e-180 634.4 418 77.0
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.0e-179 631.7 416 74.8
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 2.0e-178 629.4 398 79.4
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 5.8e-178 627.9 421 73.4
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.0e-177 627.1 411 76.9
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 2.9e-177 625.5 438 72.4
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.5e-177 624.4 406 75.9
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 6.5e-177 624.4 471 70.3
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-176 623.2 411 75.2
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 2.3e-174 615.9 409 74.8
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 2.5e-173 612.5 421 70.5
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.3e-171 604.7 412 74.0
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 4.5e-170 601.7 348 83.6
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 7.7e-170 600.9 339 86.7
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 6.5e-169 597.8 340 87.1
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 4.6e-167 591.7 357 82.4
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 6.7e-166 587.8 347 81.8
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 6.7e-166 587.8 404 72.5
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 6.9e-163 577.8 424 68.9
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 7.7e-162 574.3 403 70.2
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.1e-160 570.5 432 67.8
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 2.0e-157 559.7 411 64.7
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 2.2e-156 556.2 411 69.8
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 2.9e-153 545.8 306 86.9
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-152 543.5 399 68.7
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 2.7e-143 512.7 303 82.8
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.0e-141 506.5 411 64.7
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 4.1e-139 498.8 421 60.3
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 1.1e-136 490.7 283 84.1
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 1.2e-133 480.7 438 60.0
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 2.7e-130 469.5 282 80.1
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 4.5e-130 468.8 434 58.3
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 7.0e-123 444.9 252 86.9
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 1.9e-115 420.2 431 50.3
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 3.9e-113 412.5 233 86.7
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 4.1e-99 365.9 432 46.5
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 6.0e-90 335.5 465 43.7
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 1.6e-87 327.4 173 91.3
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 7.1e-83 312.0 410 41.7
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.6e-82 310.8 199 77.9
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 3.3e-80 303.1 163 90.8
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.4e-70 271.2 239 60.3
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 9.3e-67 258.5 157 77.7
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 9.6e-64 248.4 166 74.7
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.3e-57 228.0 253 54.2
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 5.1e-57 226.1 158 74.7
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 8.2e-55 218.8 160 68.1
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 2.7e-34 150.6 96 78.1
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 3.7e-31 140.2 84 81.0
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 1.8e-30 137.9 85 76.5
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 1.6e-29 134.8 240 37.9
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 2.0e-29 134.4 125 60.8
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.5e-24 118.2 72 81.9
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 3.1e-22 110.5 129 51.2
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 5.0e-20 103.2 59 83.1
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 6.5e-20 102.8 95 62.1
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 2.7e-18 97.4 55 78.2
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 8.8e-17 92.4 168 38.1
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 5.7e-16 89.7 55 72.7
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 9.1e-14 82.4 226 29.6
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 1.3e-12 78.6 48 79.2
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 1.4e-09 68.6 47 70.2
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 2.3e-09 67.8 94 41.5
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 4.0e-09 67.0 70 48.6
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 6.8e-09 66.2 38 84.2
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 8.9e-09 65.9 42 69.0
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 4.4e-08 63.5 44 65.9
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 4.4e-08 63.5 32 81.2
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 6.3e-07 59.7 30 83.3


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