Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.0e-221 773.1 379 100.0
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 6.9e-215 750.4 379 97.4
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 9.1e-191 670.2 384 86.2
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 5.4e-183 644.4 376 84.3
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 3.6e-179 631.7 378 79.9
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 5.7e-177 624.4 377 80.1
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.3e-173 613.2 376 79.8
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 3.2e-167 592.0 350 81.7
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.3e-165 586.6 359 79.9
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.9e-164 582.8 359 79.7
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 6.2e-163 577.8 326 87.4
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 5.8e-153 544.7 376 69.9
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 9.9e-153 543.9 373 69.2
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 2.2e-152 542.7 374 70.1
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.1e-151 540.4 376 69.1
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.7e-149 533.1 373 67.8
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 1.7e-149 533.1 377 68.2
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.1e-148 530.4 375 68.5
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.1e-148 530.4 375 68.8
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 2.1e-147 526.2 377 68.2
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 3.6e-147 525.4 375 68.3
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 1.8e-146 523.1 415 63.4
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 5.2e-146 521.5 372 66.4
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 7.6e-145 517.7 377 65.5
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.3e-144 516.9 378 65.9
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.9e-143 513.1 375 65.6
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.4e-143 512.7 375 65.6
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 9.2e-143 510.8 373 66.5
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 2.1e-142 509.6 369 68.6
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.7e-142 509.2 377 65.8
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 4.6e-142 508.4 379 65.4
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 6.0e-142 508.1 376 64.6
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.0e-141 507.3 370 67.0
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 6.6e-141 504.6 374 65.2
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.9e-140 503.1 374 63.9
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.9e-140 503.1 374 63.9
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 5.6e-140 501.5 371 65.2
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 9.6e-140 500.7 370 65.7
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.6e-139 500.0 373 64.6
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 2.1e-139 499.6 376 63.0
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 3.6e-139 498.8 372 63.2
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 4.7e-139 498.4 375 63.7
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 2.4e-138 496.1 376 65.4
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 3.1e-138 495.7 375 65.6
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 4.0e-138 495.4 351 68.1
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 6.9e-138 494.6 375 64.5
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.3e-136 490.3 393 60.8
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.8e-136 488.8 368 63.3
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 4.9e-136 488.4 376 63.6
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.9e-135 486.5 376 61.7
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.9e-135 486.5 374 62.8
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 2.4e-135 486.1 377 61.5
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.2e-135 485.3 372 62.9
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 7.1e-135 484.6 374 62.6
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.1e-134 483.0 407 59.5
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 2.7e-134 482.6 376 62.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 3.5e-134 482.3 372 62.4
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 6.0e-134 481.5 372 62.1
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.3e-133 480.3 372 62.1
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 3.0e-133 479.2 379 60.2
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 3.9e-133 478.8 374 61.8
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 2.5e-132 476.1 261 91.2
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 3.3e-132 475.7 366 62.3
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.3e-132 475.3 372 61.8
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 7.3e-132 474.6 374 61.5
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 9.6e-132 474.2 375 61.6
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 9.6e-132 474.2 375 61.6
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 9.6e-132 474.2 375 62.1
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 3.6e-131 472.2 351 63.8
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 6.2e-131 471.5 378 59.0
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.4e-130 470.3 376 60.4
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 3.1e-130 469.2 379 60.2
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 4.0e-130 468.8 371 61.7
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 3.4e-129 465.7 349 63.6
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.8e-129 464.9 370 61.9
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.7e-128 463.4 369 61.2
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.9e-128 462.6 368 61.4
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 2.9e-128 462.6 371 60.9
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-127 460.7 370 61.1
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.4e-127 460.3 370 61.4
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 7.9e-126 454.5 370 59.2
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.3e-125 453.8 379 58.8
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.1e-118 429.9 378 58.7
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.0e-117 426.0 298 68.1
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 1.1e-116 424.1 329 62.6
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 3.3e-116 422.5 373 54.4
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 1.6e-115 420.2 374 55.6
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 6.2e-115 418.3 368 56.0
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 3.8e-112 409.1 368 52.7
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.0e-109 401.0 300 65.7
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.0e-109 401.0 360 58.6
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.0e-109 401.0 274 72.3
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 3.9e-109 399.1 225 88.0
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 3.9e-109 399.1 369 54.5
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 8.7e-109 397.9 379 52.5
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 3.3e-108 396.0 381 53.0
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 3.3e-108 396.0 379 52.0
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.6e-107 393.7 374 54.5
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 5.3e-106 388.7 286 65.7
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 9.0e-106 387.9 398 50.8
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.9e-103 380.2 368 51.6
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 1.9e-103 380.2 377 52.3
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.1e-98 362.8 372 51.1
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.2e-94 350.9 279 62.4
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.3e-91 340.9 394 49.7
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 1.5e-89 334.0 253 63.2
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 4.2e-87 325.9 280 56.4
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 1.6e-86 323.9 374 45.5
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.0e-85 321.2 341 51.9
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.6e-81 307.4 374 42.8
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 7.7e-81 305.1 385 40.8
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 5.0e-80 302.4 216 65.3
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 7.2e-79 298.5 360 42.8
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 7.0e-66 255.4 392 35.2
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 7.0e-66 255.4 183 65.6
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 2.2e-59 233.8 190 60.0
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.0e-53 214.9 119 82.4
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 2.7e-49 200.3 164 59.1
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 1.5e-39 167.9 144 56.2
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 5.1e-32 142.9 93 80.6
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 8.6e-32 142.1 127 52.8
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.2e-28 131.7 210 39.5
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 3.1e-13 80.5 77 53.2
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 2.9e-11 73.9 45 73.3
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.9e-10 71.2 137 35.0


User provided reference genes

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