Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00658_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 9.8e-150 533.9 363 100.0
Ca_00702_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 9.8e-150 533.9 363 100.0
Psat1g180840 Pisum sativum HOM05D000144 ORTHO05D007858 1.2e-128 463.8 363 77.4
TPR.G9944 Trifolium pratense HOM05D000144 ORTHO05D007858 1.4e-124 450.3 363 70.2
Lalb_Chr14g0375501 Lupinus albus HOM05D000144 ORTHO05D007858 1.2e-110 404.1 365 64.4
Lj5g0003534 Lotus japonicus HOM05D000144 ORTHO05D007858 3.8e-109 399.1 403 58.6
Glyma.17G218800 Glycine max HOM05D000144 ORTHO05D007858 9.2e-108 394.4 363 63.6
Phvul.001G045200 Phaseolus vulgaris HOM05D000144 ORTHO05D007858 2.8e-104 382.9 363 63.6
VMungo0647G2473 Vigna mungo HOM05D000144 ORTHO05D007858 1.1e-103 380.9 363 62.8
arahy.Tifrunner.gnm1.ann1.ZKP4WK Arachis hypogaea HOM05D000144 ORTHO05D007858 1.6e-96 357.1 372 65.9
arahy.Tifrunner.gnm1.ann1.K67LMX Arachis hypogaea HOM05D000144 ORTHO05D007858 3.6e-96 355.9 371 67.7
Prupe.1G408500 Prunus persica HOM05D000144 ORTHO05D007858 5.4e-92 342.0 365 58.6
QL02p000650 Quercus lobata HOM05D000144 ORTHO05D007858 9.3e-92 341.3 362 58.0
CSS0040828 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D007858 9.6e-89 331.3 364 56.6
Medtr2g023120 Medicago truncatula HOM05D000144 ORTHO05D007858 1.3e-88 330.9 314 72.6
ClCG05G018040 Citrullus lanatus HOM05D000144 ORTHO05D007858 2.1e-88 330.1 365 55.3
Manes.03G050500 Manihot esculenta HOM05D000144 ORTHO05D007858 4.8e-88 328.9 363 53.7
Ciclev10008108m.g Citrus clementina HOM05D000144 ORTHO05D007858 1.1e-87 327.8 363 53.4
CiPaw.15G036300 Carya illinoinensis HOM05D000144 ORTHO05D007858 1.8e-87 327.0 363 54.0
Hma1.2p1_0196F.1_g084860 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 3.1e-87 326.2 363 56.7
TWI34G0926 Tripterygium wilfordii HOM05D000144 ORTHO05D007858 4.0e-87 325.9 363 54.0
MELO3C016887.2 Cucumis melo HOM05D000144 ORTHO05D007858 6.9e-87 325.1 365 54.2
GSVIVG01035415001 Vitis vinifera HOM05D000144 ORTHO05D007858 6.9e-87 325.1 366 55.7
Actinidia25710 Actinidia chinensis HOM05D000144 ORTHO05D007858 9.0e-87 324.7 364 54.9
CsaV3_4G035820 Cucumis sativus L. HOM05D000144 ORTHO05D007858 3.4e-86 322.8 365 54.2
CANSAT25G1581 Cannabis sativa HOM05D000144 ORTHO05D007858 5.8e-86 322.0 371 53.9
Atru.chr7.1929 Acer truncatum HOM05D000144 ORTHO05D007858 1.7e-85 320.5 363 52.1
Duzib168G0360 Durio zibethinus HOM05D000144 ORTHO05D007858 3.8e-85 319.3 363 52.3
Sed0010774 Sechium edule HOM05D000144 ORTHO05D007858 3.8e-85 319.3 365 53.7
Potri.018G061700 Populus trichocarpa HOM05D000144 ORTHO05D007858 8.4e-85 318.2 376 52.4
Gohir.D06G084800 Gossypium hirsutum HOM05D000144 ORTHO05D007858 7.9e-83 311.6 366 51.9
MD15G1055400 Malus domestica HOM05D000144 ORTHO05D007858 1.8e-82 310.5 366 56.0
Gorai.010G098200 Gossypium raimondii HOM05D000144 ORTHO05D007858 2.3e-82 310.1 366 51.6
Gohir.A06G085500 Gossypium hirsutum HOM05D000144 ORTHO05D007858 3.9e-82 309.3 366 51.6
TAR626G1661 Trochodendron aralioides HOM05D000144 ORTHO05D007858 3.9e-82 309.3 365 52.1
Thecc.09G058100 Theobroma cacao HOM05D000144 ORTHO05D007858 1.5e-81 307.4 363 52.3
Sc06g0001040 Simmondsia chinensis HOM05D000144 ORTHO05D007858 3.3e-81 306.2 367 49.6
AUR62009111 Chenopodium quinoa HOM05D000144 ORTHO05D007858 9.6e-81 304.7 367 49.9
Nitab4.5_0003730g0080 Nicotiana tabacum HOM05D000144 ORTHO05D007858 1.6e-80 303.9 365 50.7
COL.COLO4_21097 Corchorus olitorius HOM05D000144 ORTHO05D007858 2.1e-80 303.5 367 52.6
Rhsim08G0158500 Rhododendron simsii HOM05D000144 ORTHO05D007858 3.7e-80 302.8 364 52.7
Solyc08g062700.3 Solanum lycopersicum HOM05D000144 ORTHO05D007858 4.8e-80 302.4 367 50.4
FAN24G0598 Fragaria x ananassa HOM05D000144 ORTHO05D007858 1.8e-79 300.4 367 53.1
Ah.11g044400 Amaranthus hybridus HOM05D000144 ORTHO05D007858 2.4e-79 300.1 363 49.9
Nitab4.5_0003458g0020 Nicotiana tabacum HOM05D000144 ORTHO05D007858 2.4e-79 300.1 365 50.4
Sopen08g018230 Solanum pennellii HOM05D000144 ORTHO05D007858 4.0e-79 299.3 367 50.7
FAN20G1720 Fragaria x ananassa HOM05D000144 ORTHO05D007858 9.0e-79 298.1 367 56.7
THA.LOC104811050 Tarenaya hassleriana HOM05D000144 ORTHO05D007858 1.2e-78 297.7 368 49.5
Lsat_1_v5_gn_7_61241 Lactuca sativa HOM05D000144 ORTHO05D007858 1.5e-78 297.4 364 54.1
FAN15G0369 Fragaria x ananassa HOM05D000144 ORTHO05D007858 2.0e-78 297.0 367 57.5
EL10Ac2g03820 Beta vulgaris HOM05D000144 ORTHO05D007858 2.6e-78 296.6 366 50.3
CAN.G56.1 Capsicum annuum HOM05D000144 ORTHO05D007858 5.8e-78 295.4 365 49.0
FvH4_2g31480 Fragaria vesca HOM05D000144 ORTHO05D007858 5.8e-78 295.4 367 57.8
Hund03313 Selenicereus undatus HOM05D000144 ORTHO05D007858 5.8e-78 295.4 374 50.0
Haze_18149 Corylus avellana HOM05D000144 ORTHO05D007858 1.3e-77 294.3 363 51.0
Sabra06G0174200 Salix brachista HOM05D000144 ORTHO05D007858 3.2e-76 289.7 402 47.5
Nn6g35544 Nelumbo nucifera HOM05D000144 ORTHO05D007858 7.1e-76 288.5 372 50.5
AUR62039153 Chenopodium quinoa HOM05D000144 ORTHO05D007858 4.6e-75 285.8 424 44.3
Cc08_g10950 Coffea canephora HOM05D000144 ORTHO05D007858 1.0e-74 284.6 364 53.0
MSTRG.25969 Avicennia marina HOM05D000144 ORTHO05D007858 2.3e-74 283.5 363 51.5
AT4G33060 Arabidopsis thaliana HOM05D000144 ORTHO05D007858 3.0e-74 283.1 379 48.3
HanXRQChr09g0248311 Helianthus annuus HOM05D000144 ORTHO05D007858 3.9e-74 282.7 364 51.1
Cfa017981 Carpinus fangiana HOM05D000144 ORTHO05D007858 5.1e-74 282.3 363 49.9
Thhalv10025014m.g Eutrema salsugineum HOM05D000144 ORTHO05D007858 5.1e-74 282.3 368 48.9
AL7G18520 Arabidopsis lyrata HOM05D000144 ORTHO05D007858 8.7e-74 281.6 379 48.3
Sp7g30820 Schrenkiella parvula HOM05D000144 ORTHO05D007858 1.5e-73 280.8 368 48.4
Eucgr.C00671 Eucalyptus grandis HOM05D000144 ORTHO05D007858 4.3e-73 279.3 369 67.5
C01p05610 Brassica napus HOM05D000144 ORTHO05D007858 7.4e-73 278.5 368 48.4
BcaC09g52104 Brassica carinata HOM05D000144 ORTHO05D007858 1.6e-72 277.3 368 48.1
A01p05130 Brassica napus HOM05D000144 ORTHO05D007858 2.2e-72 276.9 366 48.6
BolC1t00541H Brassica oleracea HOM05D000144 ORTHO05D007858 2.2e-72 276.9 368 48.1
BraA01t00496Z Brassica rapa HOM05D000144 ORTHO05D007858 2.2e-72 276.9 368 48.1
Carub.0007s0739 Capsella rubella HOM05D000144 ORTHO05D007858 3.7e-72 276.2 377 48.3
ECA240G1772 Erigeron canadensis HOM05D000144 ORTHO05D007858 6.3e-72 275.4 364 56.6
Migut.A00110 Erythranthe guttata HOM05D000144 ORTHO05D007858 6.3e-72 275.4 364 52.2
PSO210G0248 Papaver somniferum HOM05D000144 ORTHO05D007858 1.4e-71 274.2 357 48.5
SalBow4G0930 Salvia bowleyana HOM05D000144 ORTHO05D007858 1.8e-71 273.9 363 49.0
PSO210G1977 Papaver somniferum HOM05D000144 ORTHO05D007858 4.5e-70 269.2 358 49.2
unitig_748.g7531 Utricularia gibba HOM05D000144 ORTHO05D007858 1.0e-69 268.1 363 47.1
Aqoxy7G04003 Aquilegia oxysepala HOM05D000144 ORTHO05D007858 1.7e-69 267.3 368 47.0
RcHm_v2.0_Chr6g0311311 Rosa chinensis HOM05D000144 ORTHO05D007858 2.3e-66 256.9 368 55.4
Aa31sc290G20 Aethionema arabicum HOM05D000144 ORTHO05D007858 1.5e-65 254.2 380 45.8
MBI11_g29744_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D007858 3.3e-65 253.1 364 46.7
SGA_v2.0_scaffold20G09201 Striga asiatica HOM05D000144 ORTHO05D007858 2.8e-64 250.0 375 44.3
Os01g0582400 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D007858 2.6e-62 243.4 368 46.2
HPP92_022916 Vanilla planifolia HOM05D000144 ORTHO05D007858 2.5e-60 236.9 375 42.1
Hma1.2p1_0196F.1_g084850 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 3.3e-57 226.5 188 63.3
Dinv12442 Davidia involucrata HOM05D000144 ORTHO05D007858 5.7e-57 225.7 187 65.8
ATR0051G064 Amborella trichopoda HOM05D000144 ORTHO05D007858 8.2e-56 221.9 367 49.3
Mapoly0120s0015 Marchantia polymorpha HOM05D000144 ORTHO05D007858 2.4e-55 220.3 380 42.9
DCAR_007737 Daucus carota HOM05D000144 ORTHO05D007858 1.7e-53 214.2 316 45.6
Cpa.g.sc7.149 Carica papaya HOM05D000144 ORTHO05D007858 2.5e-52 210.3 190 60.5
AagrBONN_evm.TU.Sc2ySwM_228.3582 Anthoceros agrestis HOM05D000144 ORTHO05D007858 8.0e-51 205.3 385 37.9
Peaxi162Scf00070g00028 Petunia axillaris HOM05D000144 ORTHO05D007858 4.8e-48 196.1 183 60.1
vmacro17526 Vaccinium macrocarpon HOM05D000144 ORTHO05D007858 1.6e-46 191.0 217 53.0
Pp3c19_19340 Physcomitrium patens HOM05D000144 ORTHO05D007858 7.7e-46 188.7 367 43.3
CARHR241070 Cardamine hirsuta HOM05D000144 ORTHO05D007858 3.8e-45 186.4 182 58.2
BcaB01g04144 Brassica carinata HOM05D000144 ORTHO05D007858 1.5e-41 174.5 201 52.7
SHI18713 Sapria himalayana HOM05D000144 ORTHO05D007858 1.6e-38 164.5 190 55.3
SMO201G0180 Selaginella moellendorffii HOM05D000144 ORTHO05D007858 1.3e-37 161.4 364 38.7
Dinv12444 Davidia involucrata HOM05D000144 ORTHO05D007858 4.0e-34 149.8 100 73.0
MD08G1066000 Malus domestica HOM05D000144 ORTHO05D007858 3.4e-33 146.7 134 64.9
Cpa.g.sc7.151 Carica papaya HOM05D000144 ORTHO05D007858 2.2e-32 144.1 105 70.5
Oeu042976.1 Olea europaea HOM05D000144 ORTHO05D007858 1.4e-31 141.4 99 71.7
Oeu042977.1 Olea europaea HOM05D000144 ORTHO05D007858 1.4e-31 141.4 99 71.7
Oeu042978.1 Olea europaea HOM05D000144 ORTHO05D007858 1.4e-31 141.4 99 71.7
Lj7A257G27 Lonicera japonica HOM05D000144 ORTHO05D007858 4.1e-31 139.8 117 65.0
Peaxi162Scf00070g00025 Petunia axillaris HOM05D000144 ORTHO05D007858 7.7e-30 135.6 105 68.6
CDE02G3934 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 1.0e-29 135.2 120 61.7
CBR_g18892 Chara braunii HOM05D000144 ORTHO05D007858 5.5e-28 129.4 194 43.3
CARHR241080 Cardamine hirsuta HOM05D000144 ORTHO05D007858 2.1e-27 127.5 105 63.8
FAN27G1159 Fragaria x ananassa HOM05D000144 ORTHO05D007858 6.1e-27 125.9 105 65.7
vmacro17527 Vaccinium macrocarpon HOM05D000144 ORTHO05D007858 4.4e-25 119.8 165 43.0
Potri.006G225167 Populus trichocarpa HOM05D000144 ORTHO05D331142 3.7e-24 116.7 178 45.5
Zm00001eb160460 Zea mays HOM05D000144 ORTHO05D007858 1.6e-22 111.3 107 58.9
TWI63G0465 Tripterygium wilfordii HOM05D000144 ORTHO05D413898 2.9e-21 107.1 137 51.1
SEGI_04912 Sequoiadendron giganteum HOM05D000144 ORTHO05D007858 5.0e-21 106.3 107 57.9
CDE02G2645 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 3.6e-19 100.1 94 60.6
Migut.J00024 Erythranthe guttata HOM05D000144 ORTHO05D007858 2.6e-17 94.0 106 52.8
Cre04.g215950 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D007858 2.7e-14 84.0 121 41.3
BcaB08g35303 Brassica carinata HOM05D000144 ORTHO05D007858 1.3e-13 81.6 65 63.1
MCO09G594 Micromonas commoda HOM05D000144 ORTHO05D007858 4.0e-10 70.1 114 40.4
Rhsim10G0180800 Rhododendron simsii HOM05D000144 ORTHO05D002661 9.8e-09 65.5 82 47.6
Haze_26949 Corylus avellana HOM05D000144 ORTHO05D007858 1.1e-07 62.0 185 29.7


User provided reference genes

Program Settings