Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00655_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 4.5e-26 120.9 83 100.0
Ca_00633_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 1.4e-22 109.4 83 94.0
TPR.G30686 Trifolium pratense HOM05D008368 ORTHO05D010489 1.3e-17 92.8 83 79.5
Psat1g182840 Pisum sativum HOM05D008368 ORTHO05D010489 1.7e-17 92.4 83 77.1
TPR.G40393 Trifolium pratense HOM05D008368 ORTHO05D010489 1.1e-16 89.7 88 77.3
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 1.5e-16 89.4 80 62.5
TPR.G40572 Trifolium pratense HOM05D008368 ORTHO05D010489 6.1e-15 84.0 73 75.3
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 2.0e-13 79.0 80 58.8
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 4.4e-13 77.8 76 57.9
TPR.G30669 Trifolium pratense HOM05D008368 ORTHO05D010489 5.7e-13 77.4 88 63.6
Glyma.13G207400 Glycine max HOM05D008368 ORTHO05D010489 1.7e-12 75.9 45 84.4
Phvul.006G152200 Phaseolus vulgaris HOM05D008368 ORTHO05D010489 4.8e-12 74.3 45 82.2
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 1.5e-08 62.8 43 65.1
CsaV3_3G013620 Cucumis sativus L. HOM05D008368 ORTHO05D010489 3.2e-08 61.6 43 65.1
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 9.4e-08 60.1 38 71.1
ClCG05G005370 Citrullus lanatus HOM05D008368 ORTHO05D010489 9.4e-08 60.1 43 65.1
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 1.2e-07 59.7 37 70.3
SalBow2G2001 Salvia bowleyana HOM05D008368 ORTHO05D010489 2.1e-07 58.9 38 65.8
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 2.7e-07 58.5 43 67.4
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 1.0e-06 56.6 51 56.9
Sed0011273 Sechium edule HOM05D008368 ORTHO05D010489 1.4e-06 56.2 38 63.2
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 1.8e-06 55.8 33 72.7
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 1.8e-06 55.8 35 65.7
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 3.0e-06 55.1 33 69.7
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 4.0e-06 54.7 34 67.6
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 5.2e-06 54.3 36 61.1
Migut.G00302 Erythranthe guttata HOM05D008368 ORTHO05D010489 5.2e-06 54.3 38 57.9
VMungo0540G0881 Vigna mungo HOM05D008368 ORTHO05D010489 5.2e-06 54.3 31 83.9
unitig_32.g10803 Utricularia gibba HOM05D008368 ORTHO05D010489 6.8e-06 53.9 34 64.7
Zm00001eb353800 Zea mays HOM05D038576 ORTHO05D010489 6.8e-06 53.9 37 62.2
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 8.8e-06 53.5 34 64.7
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 8.8e-06 53.5 34 64.7
FAN17G1872 Fragaria x ananassa HOM05D008368 ORTHO05D010489 8.8e-06 53.5 34 64.7
Os05g0532800 Oryza sativa ssp. japonica HOM05D038576 ORTHO05D010489 8.8e-06 53.5 38 60.5
Sc13g0004110 Simmondsia chinensis HOM05D008368 ORTHO05D010489 8.8e-06 53.5 36 61.1


User provided reference genes

Program Settings